RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 NEO1Q92859 1461 aa12.27□□□□□ -0.44
RBM39-238ENST00000493853 ECM2O94769 699 aaPredicted RBP12.27□□□□□ -0.45
RBM39-238ENST00000493853 FMN1Q68DA7 1419 aa12.27□□□□□ -0.45
RBM39-238ENST00000493853 RIOK3O14730 519 aaKnown RBP12.26□□□□□ -0.45
RBM39-238ENST00000493853 ABCA9Q8IUA7 1624 aa12.26□□□□□ -0.45
RBM39-238ENST00000493853 POTEFA5A3E0 1075 aa12.25□□□□□ -0.45
RBM39-238ENST00000493853 COLQQ9Y215 455 aaPredicted RBP12.25□□□□□ -0.45
RBM39-238ENST00000493853 MKRN3Q13064 507 aaKnown RBP12.24□□□□□ -0.45
RBM39-238ENST00000493853 AKNAQ7Z591 1439 aa12.23□□□□□ -0.45
RBM39-238ENST00000493853 PLCG2P16885 1265 aa12.23□□□□□ -0.45
RBM39-238ENST00000493853 PKD2Q13563 968 aa12.23□□□□□ -0.45
RBM39-238ENST00000493853 RNF25Q96BH1 459 aaPredicted RBP12.23□□□□□ -0.45
RBM39-238ENST00000493853 DENND4BO75064 1496 aaPredicted RBP12.22□□□□□ -0.45
RBM39-238ENST00000493853 EFCAB2Q5VUJ9 269 aa12.22□□□□□ -0.45
RBM39-238ENST00000493853 FANCAO15360 1455 aa12.21□□□□□ -0.45
RBM39-238ENST00000493853 ARHGAP35Q9NRY4 1499 aa12.21□□□□□ -0.46
RBM39-238ENST00000493853 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
RBM39-238ENST00000493853 CDK13Q14004 1512 aaKnown RBP12.2□□□□□ -0.46
RBM39-238ENST00000493853 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
RBM39-238ENST00000493853 IRX5P78411 483 aaPredicted RBP12.19□□□□□ -0.46
RBM39-238ENST00000493853 OCEL1Q9H607 264 aa12.19□□□□□ -0.46
RBM39-238ENST00000493853 MYT1LQ9UL68 1186 aa12.19□□□□□ -0.46
RBM39-238ENST00000493853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.18□□□□□ -0.46
RBM39-238ENST00000493853 OTUD5Q96G74 571 aa12.18□□□□□ -0.46
RBM39-238ENST00000493853 PLCH2O75038 1416 aa12.18□□□□□ -0.46
RBM39-238ENST00000493853 POTEJP0CG39 1038 aa12.17□□□□□ -0.46
RBM39-238ENST00000493853 MAMSTRQ6ZN01 415 aa12.17□□□□□ -0.46
RBM39-238ENST00000493853 TAOK2Q9UL54 1235 aa12.17□□□□□ -0.46
RBM39-238ENST00000493853 CLIP1P30622 1438 aa12.17□□□□□ -0.46
RBM39-238ENST00000493853 SCAPERQ9BY12 1400 aa12.17□□□□□ -0.46
RBM39-238ENST00000493853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.16□□□□□ -0.46
RBM39-238ENST00000493853 ZFP91Q96JP5 570 aaPredicted RBP12.16□□□□□ -0.46
RBM39-238ENST00000493853 HECW1Q76N89 1606 aa12.15□□□□□ -0.46
RBM39-238ENST00000493853 MLECQ14165 292 aa12.15□□□□□ -0.46
RBM39-238ENST00000493853 SCUBE2Q9NQ36 999 aa12.15□□□□□ -0.46
RBM39-238ENST00000493853 POGZQ7Z3K3 1410 aa12.14□□□□□ -0.47
RBM39-238ENST00000493853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
RBM39-238ENST00000493853 CFAP74Q9C0B2 1584 aa12.13□□□□□ -0.47
RBM39-238ENST00000493853 TROQ12816 1431 aaPredicted RBP12.13□□□□□ -0.47
RBM39-238ENST00000493853 RGL2O15211 777 aa12.13□□□□□ -0.47
RBM39-238ENST00000493853 TTC37Q6PGP7 1564 aa12.13□□□□□ -0.47
RBM39-238ENST00000493853 PTPRMP28827 1452 aa12.12□□□□□ -0.47
RBM39-238ENST00000493853 HECW2Q9P2P5 1572 aa12.12□□□□□ -0.47
RBM39-238ENST00000493853 MAGI2Q86UL8 1455 aa12.11□□□□□ -0.47
RBM39-238ENST00000493853 AFAP1Q8N556 730 aa12.11□□□□□ -0.47
RBM39-238ENST00000493853 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
RBM39-238ENST00000493853 YEATS2Q9ULM3 1422 aa12.11□□□□□ -0.47
RBM39-238ENST00000493853 FRMPD1Q5SYB0 1578 aa12.1□□□□□ -0.47
RBM39-238ENST00000493853 ILDR1Q86SU0 546 aaPredicted RBP12.09□□□□□ -0.47
RBM39-238ENST00000493853 ARHGAP5Q13017 1502 aa12.09□□□□□ -0.47
RBM39-238ENST00000493853 ZFYVE16Q7Z3T8 1539 aa12.09□□□□□ -0.47
RBM39-238ENST00000493853 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.47
RBM39-238ENST00000493853 KIF14Q15058 1648 aa12.08□□□□□ -0.48
RBM39-238ENST00000493853 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
RBM39-238ENST00000493853 ZNF777Q9ULD5 760 aaPredicted RBP12.08□□□□□ -0.48
RBM39-238ENST00000493853 ARHGEF40Q8TER5 1519 aa12.07□□□□□ -0.48
RBM39-238ENST00000493853 PDCD7Q8N8D1 485 aaKnown RBP12.07□□□□□ -0.48
RBM39-238ENST00000493853 ATP10AO60312 1499 aa12.07□□□□□ -0.48
RBM39-238ENST00000493853 BCL11BQ9C0K0 894 aaPredicted RBP12.06□□□□□ -0.48
RBM39-238ENST00000493853 ESF1Q9H501 851 aaKnown RBP12.06□□□□□ -0.48
RBM39-238ENST00000493853 STK24Q9Y6E0 443 aa12.06□□□□□ -0.48
RBM39-238ENST00000493853 ZNF518AQ6AHZ1 1483 aa12.06□□□□□ -0.48
RBM39-238ENST00000493853 ADAMTSL3P82987 1691 aa12.06□□□□□ -0.48
RBM39-238ENST00000493853 ZMYM4Q5VZL5 1548 aa12.06□□□□□ -0.48
RBM39-238ENST00000493853 STK25O00506 426 aa12.05□□□□□ -0.48
RBM39-238ENST00000493853 RICTORQ6R327 1708 aa12.05□□□□□ -0.48
RBM39-238ENST00000493853 BCORL1Q5H9F3 1711 aa12.04□□□□□ -0.48
RBM39-238ENST00000493853 C9orf84Q5VXU9 1444 aa12.03□□□□□ -0.48
RBM39-238ENST00000493853 FYCO1Q9BQS8 1478 aa12.03□□□□□ -0.48
RBM39-238ENST00000493853 L3MBTL3Q96JM7 780 aaPredicted RBP12.03□□□□□ -0.48
RBM39-238ENST00000493853 CFDP1Q9UEE9 299 aaPredicted RBP12.03□□□□□ -0.48
RBM39-238ENST00000493853 MADDQ8WXG6 1647 aa12.03□□□□□ -0.48
RBM39-238ENST00000493853 HSPA2P54652 639 aa12.02□□□□□ -0.49
RBM39-238ENST00000493853 MYO5CQ9NQX4 1742 aa12.02□□□□□ -0.49
RBM39-238ENST00000493853 MTUS2Q5JR59 1369 aa12.02□□□□□ -0.49
RBM39-238ENST00000493853 PCF11O94913 1555 aaKnown RBP12.01□□□□□ -0.49
RBM39-238ENST00000493853 CEBPAP49715 358 aaPredicted RBP12.01□□□□□ -0.49
RBM39-238ENST00000493853 HNRNPMP52272 730 aaKnown RBP eCLIP12.01□□□□□ -0.49
RBM39-238ENST00000493853 SOX12O15370 315 aa12□□□□□ -0.49
RBM39-238ENST00000493853 DPY19L2Q6NUT2 758 aa12□□□□□ -0.49
RBM39-238ENST00000493853 CCNB3Q8WWL7 1395 aa12□□□□□ -0.49
RBM39-238ENST00000493853 TRAPPC8Q9Y2L5 1435 aa11.99□□□□□ -0.49
RBM39-238ENST00000493853 SPAG9O60271 1321 aaKnown RBP11.98□□□□□ -0.49
RBM39-238ENST00000493853 G3V3G9 751 aa11.98□□□□□ -0.49
RBM39-238ENST00000493853 RIMS1Q86UR5 1692 aaKnown RBP11.97□□□□□ -0.49
RBM39-238ENST00000493853 MLH3Q9UHC1 1453 aa11.97□□□□□ -0.49
RBM39-238ENST00000493853 SLAIN1Q8ND83 568 aa11.97□□□□□ -0.49
RBM39-238ENST00000493853 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.97□□□□□ -0.49
RBM39-238ENST00000493853 LMTK3Q96Q04 1460 aa11.96□□□□□ -0.49
RBM39-238ENST00000493853 FBXO41Q8TF61 875 aa11.96□□□□□ -0.49
RBM39-238ENST00000493853 C3orf67Q6ZVT6 689 aa11.95□□□□□ -0.5
RBM39-238ENST00000493853 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
RBM39-238ENST00000493853 KDM5CP41229 1560 aa11.95□□□□□ -0.5
RBM39-238ENST00000493853 ARHGEF12Q9NZN5 1544 aa11.95□□□□□ -0.5
RBM39-238ENST00000493853 GPATCH8Q9UKJ3 1502 aaKnown RBP11.95□□□□□ -0.5
RBM39-238ENST00000493853 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
RBM39-238ENST00000493853 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
RBM39-238ENST00000493853 LRRIQ1Q96JM4 1722 aa11.94□□□□□ -0.5
RBM39-238ENST00000493853 ABCC1P33527 1531 aa11.93□□□□□ -0.5
RBM39-238ENST00000493853 BOLA1Q9Y3E2 137 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms