RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 FBXO41Q8TF61 875 aa18.61■□□□□ 0.57
SNX17-208ENST00000493711 PLXNC1O60486 1568 aa18.6■□□□□ 0.57
SNX17-208ENST00000493711 C1QBPQ07021 282 aaKnown RBP18.6■□□□□ 0.57
SNX17-208ENST00000493711 ATP10AO60312 1499 aa18.59■□□□□ 0.57
SNX17-208ENST00000493711 DHX29Q7Z478 1369 aaKnown RBP18.59■□□□□ 0.57
SNX17-208ENST00000493711 SLC4A2P04920 1241 aa18.58■□□□□ 0.56
SNX17-208ENST00000493711 PCGF6Q9BYE7 350 aa18.58■□□□□ 0.56
SNX17-208ENST00000493711 DUOX2Q9NRD8 1548 aa18.58■□□□□ 0.56
SNX17-208ENST00000493711 YEATS2Q9ULM3 1422 aa18.57■□□□□ 0.56
SNX17-208ENST00000493711 HRCP23327 699 aa18.56■□□□□ 0.56
SNX17-208ENST00000493711 A2MP01023 1474 aa18.56■□□□□ 0.56
SNX17-208ENST00000493711 ADGBQ8N7X0 1667 aa18.56■□□□□ 0.56
SNX17-208ENST00000493711 NAIPQ13075 1403 aa18.56■□□□□ 0.56
SNX17-208ENST00000493711 ERBINQ96RT1 1412 aa18.56■□□□□ 0.56
SNX17-208ENST00000493711 SETD5Q9C0A6 1442 aa18.56■□□□□ 0.56
SNX17-208ENST00000493711 ANKRD50Q9ULJ7 1429 aa18.56■□□□□ 0.56
SNX17-208ENST00000493711 KIDINS220Q9ULH0 1771 aa18.55■□□□□ 0.56
SNX17-208ENST00000493711 ARHGEF40Q8TER5 1519 aa18.55■□□□□ 0.56
SNX17-208ENST00000493711 REREQ9P2R6 1566 aa18.53■□□□□ 0.56
SNX17-208ENST00000493711 DIP2CQ9Y2E4 1556 aa18.53■□□□□ 0.56
SNX17-208ENST00000493711 U3KPZ7 1027 aaPredicted RBP18.52■□□□□ 0.56
SNX17-208ENST00000493711 ABCA6Q8N139 1617 aa18.5■□□□□ 0.55
SNX17-208ENST00000493711 AGLP35573 1532 aa18.49■□□□□ 0.55
SNX17-208ENST00000493711 KIF3BO15066 747 aa18.48■□□□□ 0.55
SNX17-208ENST00000493711 RAB3GAP2Q9H2M9 1393 aa18.46■□□□□ 0.55
SNX17-208ENST00000493711 GCC2Q8IWJ2 1684 aa18.45■□□□□ 0.54
SNX17-208ENST00000493711 ARID4BQ4LE39 1312 aaPredicted RBP18.45■□□□□ 0.54
SNX17-208ENST00000493711 EIF2AK4Q9P2K8 1649 aaKnown RBP18.45■□□□□ 0.54
SNX17-208ENST00000493711 KANK1Q14678 1352 aa18.43■□□□□ 0.54
SNX17-208ENST00000493711 SLC4A1APQ9BWU0 796 aaKnown RBP18.41■□□□□ 0.54
SNX17-208ENST00000493711 GGT6Q6P531 493 aa18.4■□□□□ 0.54
SNX17-208ENST00000493711 TRIM52Q96A61 297 aa18.4■□□□□ 0.54
SNX17-208ENST00000493711 BCORL1Q5H9F3 1711 aa18.39■□□□□ 0.53
SNX17-208ENST00000493711 NUP155O75694 1391 aa18.39■□□□□ 0.53
SNX17-208ENST00000493711 FAM135AQ9P2D6 1515 aa18.39■□□□□ 0.53
SNX17-208ENST00000493711 ESF1Q9H501 851 aaKnown RBP18.37■□□□□ 0.53
SNX17-208ENST00000493711 RNF17Q9BXT8 1623 aaKnown RBP18.35■□□□□ 0.53
SNX17-208ENST00000493711 WASHC2CQ9Y4E1 1318 aa18.35■□□□□ 0.53
SNX17-208ENST00000493711 PRDM15P57071 1507 aaPredicted RBP18.34■□□□□ 0.53
SNX17-208ENST00000493711 UNC13BO14795 1591 aa18.34■□□□□ 0.53
SNX17-208ENST00000493711 CNTLNQ9NXG0 1405 aa18.33■□□□□ 0.53
SNX17-208ENST00000493711 MLECQ14165 292 aa18.33■□□□□ 0.52
SNX17-208ENST00000493711 DEPDC5O75140 1603 aa18.33■□□□□ 0.52
SNX17-208ENST00000493711 KDM5DQ9BY66 1539 aa18.33■□□□□ 0.52
SNX17-208ENST00000493711 VWDEQ8N2E2 1590 aa18.3■□□□□ 0.52
SNX17-208ENST00000493711 LMTK2Q8IWU2 1503 aa18.3■□□□□ 0.52
SNX17-208ENST00000493711 MPHOSPH9Q99550 1183 aa18.3■□□□□ 0.52
SNX17-208ENST00000493711 MROH1Q8NDA8 1641 aa18.28■□□□□ 0.52
SNX17-208ENST00000493711 PTPRMP28827 1452 aa18.27■□□□□ 0.52
SNX17-208ENST00000493711 PZPP20742 1482 aa18.26■□□□□ 0.51
SNX17-208ENST00000493711 ABCC3O15438 1527 aa18.26■□□□□ 0.51
SNX17-208ENST00000493711 IQGAP3Q86VI3 1631 aa18.26■□□□□ 0.51
SNX17-208ENST00000493711 LMTK3Q96Q04 1460 aa18.26■□□□□ 0.51
SNX17-208ENST00000493711 ARHGAP31Q2M1Z3 1444 aa18.25■□□□□ 0.51
SNX17-208ENST00000493711 PKD2Q13563 968 aa18.25■□□□□ 0.51
SNX17-208ENST00000493711 SIGLEC1Q9BZZ2 1709 aa18.25■□□□□ 0.51
SNX17-208ENST00000493711 ZC3H13Q5T200 1668 aaKnown RBP18.24■□□□□ 0.51
SNX17-208ENST00000493711 RPRD2Q5VT52 1461 aaKnown RBP18.23■□□□□ 0.51
SNX17-208ENST00000493711 ZMYM3Q14202 1370 aa18.21■□□□□ 0.51
SNX17-208ENST00000493711 DHX57Q6P158 1386 aaKnown RBP18.21■□□□□ 0.51
SNX17-208ENST00000493711 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
SNX17-208ENST00000493711 CLSPNQ9HAW4 1339 aa18.21■□□□□ 0.51
SNX17-208ENST00000493711 EFCAB6Q5THR3 1501 aa18.19■□□□□ 0.5
SNX17-208ENST00000493711 TET3O43151 1660 aa18.19■□□□□ 0.5
SNX17-208ENST00000493711 NPATQ14207 1427 aa18.17■□□□□ 0.5
SNX17-208ENST00000493711 ADAMTSL3P82987 1691 aa18.17■□□□□ 0.5
SNX17-208ENST00000493711 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
SNX17-208ENST00000493711 MROH2AA6NES4 1674 aa18.15■□□□□ 0.5
SNX17-208ENST00000493711 CAMSAP1Q5T5Y3 1602 aa18.14■□□□□ 0.49
SNX17-208ENST00000493711 PTPRTO14522 1441 aa18.14■□□□□ 0.49
SNX17-208ENST00000493711 ANKRD30BQ9BXX2 1392 aa18.13■□□□□ 0.49
SNX17-208ENST00000493711 MADDQ8WXG6 1647 aa18.12■□□□□ 0.49
SNX17-208ENST00000493711 CLTCQ00610 1675 aaKnown RBP18.12■□□□□ 0.49
SNX17-208ENST00000493711 CERKQ8TCT0 537 aa18.12■□□□□ 0.49
SNX17-208ENST00000493711 SLC52A1Q9NWF4 448 aa18.12■□□□□ 0.49
SNX17-208ENST00000493711 NOS1P29475 1434 aa18.12■□□□□ 0.49
SNX17-208ENST00000493711 SOCS7O14512 581 aa18.11■□□□□ 0.49
SNX17-208ENST00000493711 CEP152O94986 1710 aa18.11■□□□□ 0.49
SNX17-208ENST00000493711 FER1L4A9Z1Z3 1794 aa18.11■□□□□ 0.49
SNX17-208ENST00000493711 ERVK-7P63135 1459 aa18.1■□□□□ 0.49
SNX17-208ENST00000493711 HSPA2P54652 639 aa18.1■□□□□ 0.49
SNX17-208ENST00000493711 CAPN15O75808 1086 aa18.09■□□□□ 0.49
SNX17-208ENST00000493711 FBXO31Q5XUX0 539 aaPredicted RBP18.09■□□□□ 0.49
SNX17-208ENST00000493711 ILDR2Q71H61 639 aa18.09■□□□□ 0.49
SNX17-208ENST00000493711 CCDC144AA2RUR9 1427 aa18.08■□□□□ 0.49
SNX17-208ENST00000493711 TNRQ92752 1358 aa18.08■□□□□ 0.49
SNX17-208ENST00000493711 CEBPAP49715 358 aaPredicted RBP18.08■□□□□ 0.48
SNX17-208ENST00000493711 E9PCH4 1651 aa18.08■□□□□ 0.48
SNX17-208ENST00000493711 SPATA31D1Q6ZQQ2 1576 aa18.07■□□□□ 0.48
SNX17-208ENST00000493711 TRPM2O94759 1503 aa18.07■□□□□ 0.48
SNX17-208ENST00000493711 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
SNX17-208ENST00000493711 DISP3Q9P2K9 1392 aa18.06■□□□□ 0.48
SNX17-208ENST00000493711 RIMS1Q86UR5 1692 aaKnown RBP18.06■□□□□ 0.48
SNX17-208ENST00000493711 NLRP1Q9C000 1473 aa18.03■□□□□ 0.48
SNX17-208ENST00000493711 IDI1Q13907 227 aa18.01■□□□□ 0.47
SNX17-208ENST00000493711 TIMELESSQ9UNS1 1208 aa18.01■□□□□ 0.47
SNX17-208ENST00000493711 C3P01024 1663 aa18.01■□□□□ 0.47
SNX17-208ENST00000493711 PREX1Q8TCU6 1659 aa18■□□□□ 0.47
SNX17-208ENST00000493711 ZBTB22O15209 634 aa18■□□□□ 0.47
SNX17-208ENST00000493711 STAG3Q9UJ98 1225 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms