RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 RSPH6AQ9H0K4 717 aa24.94■■□□□ 1.58
RNF40-203ENST00000493683 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
RNF40-203ENST00000493683 TPM3P06753 285 aa24.92■■□□□ 1.58
RNF40-203ENST00000493683 PAK3O75914 559 aaPredicted RBP24.92■■□□□ 1.58
RNF40-203ENST00000493683 TAF7LQ5H9L4 462 aa24.92■■□□□ 1.58
RNF40-203ENST00000493683 NGEFQ8N5V2 710 aa24.91■■□□□ 1.58
RNF40-203ENST00000493683 TMX4Q9H1E5 349 aaPredicted RBP24.9■■□□□ 1.58
RNF40-203ENST00000493683 CGNL1Q0VF96 1302 aa24.88■■□□□ 1.57
RNF40-203ENST00000493683 UACAQ9BZF9 1416 aa24.88■■□□□ 1.57
RNF40-203ENST00000493683 E9PSI1 815 aa24.88■■□□□ 1.57
RNF40-203ENST00000493683 CLUAP1Q96AJ1 413 aa24.88■■□□□ 1.57
RNF40-203ENST00000493683 ZBED9Q6R2W3 1325 aa24.86■■□□□ 1.57
RNF40-203ENST00000493683 RASSF8Q8NHQ8 419 aa24.86■■□□□ 1.57
RNF40-203ENST00000493683 SLC4A10Q6U841 1118 aa24.85■■□□□ 1.57
RNF40-203ENST00000493683 SF3A1Q15459 793 aaKnown RBP24.85■■□□□ 1.57
RNF40-203ENST00000493683 CCDC146Q8IYE0 955 aa24.85■■□□□ 1.57
RNF40-203ENST00000493683 PDE4AP27815 886 aa24.84■■□□□ 1.57
RNF40-203ENST00000493683 CHMP3Q9Y3E7 222 aa24.84■■□□□ 1.57
RNF40-203ENST00000493683 RAPGEF2Q9Y4G8 1499 aa24.84■■□□□ 1.57
RNF40-203ENST00000493683 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
RNF40-203ENST00000493683 A0A0U1RQG5 324 aaPredicted RBP24.83■■□□□ 1.57
RNF40-203ENST00000493683 EID1Q9Y6B2 187 aa24.83■■□□□ 1.57
RNF40-203ENST00000493683 ZKSCAN2Q63HK3 967 aa24.82■■□□□ 1.56
RNF40-203ENST00000493683 KIF3BO15066 747 aa24.82■■□□□ 1.56
RNF40-203ENST00000493683 GSE1Q14687 1217 aa24.82■■□□□ 1.56
RNF40-203ENST00000493683 ZNF330Q9Y3S2 320 aaPredicted RBP24.81■■□□□ 1.56
RNF40-203ENST00000493683 RRP1P56182 461 aaKnown RBP24.81■■□□□ 1.56
RNF40-203ENST00000493683 HSP90AA2PQ14568 343 aaPredicted RBP24.81■■□□□ 1.56
RNF40-203ENST00000493683 DDX49Q9Y6V7 483 aaKnown RBP24.8■■□□□ 1.56
RNF40-203ENST00000493683 FANCIQ9NVI1 1328 aa24.79■■□□□ 1.56
RNF40-203ENST00000493683 CEP89Q96ST8 783 aa24.79■■□□□ 1.56
RNF40-203ENST00000493683 CCDC144AA2RUR9 1427 aa24.79■■□□□ 1.56
RNF40-203ENST00000493683 AMPHP49418 695 aa24.78■■□□□ 1.56
RNF40-203ENST00000493683 GOLGA6L19H0YKK7 550 aa24.78■■□□□ 1.56
RNF40-203ENST00000493683 H3BQV1 296 aa24.78■■□□□ 1.56
RNF40-203ENST00000493683 LRRFIP1Q32MZ4 808 aaKnown RBP24.78■■□□□ 1.56
RNF40-203ENST00000493683 IFFO2Q5TF58 517 aa24.78■■□□□ 1.56
RNF40-203ENST00000493683 FOXD4L1Q9NU39 408 aa24.77■■□□□ 1.56
RNF40-203ENST00000493683 TSR1Q2NL82 804 aaKnown RBP24.76■■□□□ 1.55
RNF40-203ENST00000493683 ARID3AQ99856 593 aa24.76■■□□□ 1.55
RNF40-203ENST00000493683 GPS2Q13227 327 aa24.76■■□□□ 1.55
RNF40-203ENST00000493683 MROH2BQ7Z745 1585 aa24.75■■□□□ 1.55
RNF40-203ENST00000493683 AMER1Q5JTC6 1135 aaPredicted RBP24.75■■□□□ 1.55
RNF40-203ENST00000493683 NOL8Q76FK4 1167 aaKnown RBP24.75■■□□□ 1.55
RNF40-203ENST00000493683 NGDNQ8NEJ9 315 aaKnown RBP24.75■■□□□ 1.55
RNF40-203ENST00000493683 PRKRIP1Q9H875 184 aaPredicted RBP24.75■■□□□ 1.55
RNF40-203ENST00000493683 TPM1P09493 284 aa24.75■■□□□ 1.55
RNF40-203ENST00000493683 REC8O95072 547 aa24.75■■□□□ 1.55
RNF40-203ENST00000493683 DHX57Q6P158 1386 aaKnown RBP24.75■■□□□ 1.55
RNF40-203ENST00000493683 FAM184AQ8NB25 1140 aa24.74■■□□□ 1.55
RNF40-203ENST00000493683 RUFY2Q8WXA3 655 aa24.74■■□□□ 1.55
RNF40-203ENST00000493683 BECN2A8MW95 431 aa24.73■■□□□ 1.55
RNF40-203ENST00000493683 PANK3Q9H999 370 aa24.73■■□□□ 1.55
RNF40-203ENST00000493683 AAMPQ13685 434 aa24.72■■□□□ 1.55
RNF40-203ENST00000493683 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.72■■□□□ 1.55
RNF40-203ENST00000493683 WASHC2CQ9Y4E1 1318 aa24.72■■□□□ 1.55
RNF40-203ENST00000493683 TPM2P07951 284 aa24.72■■□□□ 1.55
RNF40-203ENST00000493683 SETQ01105 290 aaPredicted RBP24.72■■□□□ 1.55
RNF40-203ENST00000493683 ANKRD45Q5TZF3 282 aa24.71■■□□□ 1.55
RNF40-203ENST00000493683 CCDC70Q6NSX1 233 aa24.71■■□□□ 1.55
RNF40-203ENST00000493683 DDX19BQ9UMR2 479 aa24.71■■□□□ 1.55
RNF40-203ENST00000493683 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
RNF40-203ENST00000493683 HNRNPMP52272 730 aaKnown RBP eCLIP24.71■■□□□ 1.55
RNF40-203ENST00000493683 ST20-MTHFSA0A0A6YYL1 179 aa24.7■■□□□ 1.55
RNF40-203ENST00000493683 TPD52L1Q16890 204 aaPredicted RBP24.7■■□□□ 1.54
RNF40-203ENST00000493683 ROCK1Q13464 1354 aa24.69■■□□□ 1.54
RNF40-203ENST00000493683 CPLX2Q6PUV4 134 aaKnown RBP24.69■■□□□ 1.54
RNF40-203ENST00000493683 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
RNF40-203ENST00000493683 FHOD3Q2V2M9 1422 aa24.69■■□□□ 1.54
RNF40-203ENST00000493683 TOMM22Q9NS69 142 aa24.68■■□□□ 1.54
RNF40-203ENST00000493683 EVC2Q86UK5 1308 aa24.68■■□□□ 1.54
RNF40-203ENST00000493683 MARCH6O60337 910 aa24.67■■□□□ 1.54
RNF40-203ENST00000493683 RILPL2Q969X0 211 aa24.67■■□□□ 1.54
RNF40-203ENST00000493683 CHMP5Q9NZZ3 219 aa24.67■■□□□ 1.54
RNF40-203ENST00000493683 AKAP17AQ02040 695 aaKnown RBP24.66■■□□□ 1.54
RNF40-203ENST00000493683 DIAPH3Q9NSV4 1193 aa24.66■■□□□ 1.54
RNF40-203ENST00000493683 ZKSCAN1P17029 563 aaPredicted RBP24.66■■□□□ 1.54
RNF40-203ENST00000493683 API5Q9BZZ5 524 aaKnown RBP24.66■■□□□ 1.54
RNF40-203ENST00000493683 CREBRFQ8IUR6 639 aa24.65■■□□□ 1.54
RNF40-203ENST00000493683 EXOC6Q8TAG9 804 aa24.65■■□□□ 1.54
RNF40-203ENST00000493683 SYNE3Q6ZMZ3 975 aa24.65■■□□□ 1.54
RNF40-203ENST00000493683 CRBNQ96SW2 442 aa24.65■■□□□ 1.54
RNF40-203ENST00000493683 USP47Q96K76 1375 aa24.65■■□□□ 1.54
RNF40-203ENST00000493683 COG3Q96JB2 828 aa24.64■■□□□ 1.54
RNF40-203ENST00000493683 VGFO15240 615 aaPredicted RBP24.63■■□□□ 1.53
RNF40-203ENST00000493683 CCDC9Q9Y3X0 531 aaKnown RBP24.63■■□□□ 1.53
RNF40-203ENST00000493683 NCBP3Q53F19 620 aaKnown RBP24.63■■□□□ 1.53
RNF40-203ENST00000493683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.62■■□□□ 1.53
RNF40-203ENST00000493683 TRAK1Q9UPV9 953 aa24.62■■□□□ 1.53
RNF40-203ENST00000493683 RRP7AQ9Y3A4 280 aaKnown RBP24.61■■□□□ 1.53
RNF40-203ENST00000493683 FRAT2O75474 233 aaPredicted RBP24.61■■□□□ 1.53
RNF40-203ENST00000493683 FOXD4L5Q5VV16 416 aaPredicted RBP24.61■■□□□ 1.53
RNF40-203ENST00000493683 FOXD4L4Q8WXT5 416 aaPredicted RBP24.61■■□□□ 1.53
RNF40-203ENST00000493683 G3V3G9 751 aa24.61■■□□□ 1.53
RNF40-203ENST00000493683 DCAF8Q5TAQ9 597 aa24.61■■□□□ 1.53
RNF40-203ENST00000493683 STAC3Q96MF2 364 aa24.6■■□□□ 1.53
RNF40-203ENST00000493683 HOOK1Q9UJC3 728 aaKnown RBP24.6■■□□□ 1.53
RNF40-203ENST00000493683 NUCB2P80303 420 aa24.59■■□□□ 1.53
RNF40-203ENST00000493683 ANKRD20A12PQ8NF67 263 aa24.59■■□□□ 1.53
RNF40-203ENST00000493683 NEXNQ0ZGT2 675 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms