RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 DEPDC5O75140 1603 aa15.12■□□□□ 0.01
PHACTR4-204ENST00000493669 CCDC7Q96M83 1385 aa15.11■□□□□ 0.01
PHACTR4-204ENST00000493669 EIF2AK4Q9P2K8 1649 aaKnown RBP15.11■□□□□ 0.01
PHACTR4-204ENST00000493669 PLA2R1Q13018 1463 aa15.1■□□□□ 0.01
PHACTR4-204ENST00000493669 SCAPERQ9BY12 1400 aa15.1■□□□□ 0.01
PHACTR4-204ENST00000493669 CNTLNQ9NXG0 1405 aa15.1■□□□□ 0.01
PHACTR4-204ENST00000493669 KDM5CP41229 1560 aa15.08■□□□□ 0.01
PHACTR4-204ENST00000493669 AFAP1Q8N556 730 aa15.08■□□□□ 0.01
PHACTR4-204ENST00000493669 GTF3C3Q9Y5Q9 886 aa15.08■□□□□ 0.01
PHACTR4-204ENST00000493669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.07■□□□□ 01e-6■■■□□ 18.7
PHACTR4-204ENST00000493669 USP47Q96K76 1375 aa15.07■□□□□ 0
PHACTR4-204ENST00000493669 ARID4BQ4LE39 1312 aaPredicted RBP15.07■□□□□ 0
PHACTR4-204ENST00000493669 ZNF518AQ6AHZ1 1483 aa15.06■□□□□ 0
PHACTR4-204ENST00000493669 VWDEQ8N2E2 1590 aa15.06■□□□□ 0
PHACTR4-204ENST00000493669 TET3O43151 1660 aa15.05■□□□□ -0
PHACTR4-204ENST00000493669 DHX29Q7Z478 1369 aaKnown RBP15.04■□□□□ -0
PHACTR4-204ENST00000493669 CD109Q6YHK3 1445 aa15.04■□□□□ -0
PHACTR4-204ENST00000493669 PRDM15P57071 1507 aaPredicted RBP15.03■□□□□ -0
PHACTR4-204ENST00000493669 KANK1Q14678 1352 aa15.03■□□□□ -0
PHACTR4-204ENST00000493669 PRAG1Q86YV5 1406 aa15.03■□□□□ -0
PHACTR4-204ENST00000493669 E9PCH4 1651 aa15.03■□□□□ -0
PHACTR4-204ENST00000493669 TRPM2O94759 1503 aa15.03■□□□□ -0
PHACTR4-204ENST00000493669 DCAF11Q8TEB1 546 aa15.03■□□□□ -0
PHACTR4-204ENST00000493669 LAMC1P11047 1609 aa15.02■□□□□ -0
PHACTR4-204ENST00000493669 KIDINS220Q9ULH0 1771 aa15.02■□□□□ -0
PHACTR4-204ENST00000493669 KIF7Q2M1P5 1343 aa15.02■□□□□ -0
PHACTR4-204ENST00000493669 ZNF326Q5BKZ1 582 aaKnown RBP15.02□□□□□ -0.01
PHACTR4-204ENST00000493669 A2MP01023 1474 aa15.02□□□□□ -0.01
PHACTR4-204ENST00000493669 TRPM1Q7Z4N2 1603 aa15.02□□□□□ -0.01
PHACTR4-204ENST00000493669 C11orf95C9JLR9 678 aaPredicted RBP15.01□□□□□ -0.01
PHACTR4-204ENST00000493669 PTPRTO14522 1441 aa15.01□□□□□ -0.01
PHACTR4-204ENST00000493669 NEO1Q92859 1461 aa15.01□□□□□ -0.01
PHACTR4-204ENST00000493669 POGZQ7Z3K3 1410 aa15.01□□□□□ -0.01
PHACTR4-204ENST00000493669 MLH3Q9UHC1 1453 aa15□□□□□ -0.01
PHACTR4-204ENST00000493669 SPHKAPQ2M3C7 1700 aa15□□□□□ -0.01
PHACTR4-204ENST00000493669 CARD11Q9BXL7 1154 aa15□□□□□ -0.01
PHACTR4-204ENST00000493669 GPRASP1Q5JY77 1395 aa14.99□□□□□ -0.01
PHACTR4-204ENST00000493669 MROH1Q8NDA8 1641 aa14.99□□□□□ -0.01
PHACTR4-204ENST00000493669 NEURL4Q96JN8 1562 aa14.99□□□□□ -0.01
PHACTR4-204ENST00000493669 BCORL1Q5H9F3 1711 aa14.99□□□□□ -0.01
PHACTR4-204ENST00000493669 ROCK2O75116 1388 aaKnown RBP14.99□□□□□ -0.01
PHACTR4-204ENST00000493669 RNF17Q9BXT8 1623 aaKnown RBP14.98□□□□□ -0.01
PHACTR4-204ENST00000493669 STAC3Q96MF2 364 aa14.98□□□□□ -0.01
PHACTR4-204ENST00000493669 KDM2AQ9Y2K7 1162 aa14.97□□□□□ -0.01
PHACTR4-204ENST00000493669 LMTK2Q8IWU2 1503 aa14.97□□□□□ -0.01
PHACTR4-204ENST00000493669 CEP152O94986 1710 aa14.97□□□□□ -0.01
PHACTR4-204ENST00000493669 HECW2Q9P2P5 1572 aa14.97□□□□□ -0.01
PHACTR4-204ENST00000493669 GLI2P10070 1586 aa14.95□□□□□ -0.02
PHACTR4-204ENST00000493669 KIF3BO15066 747 aa14.94□□□□□ -0.02
PHACTR4-204ENST00000493669 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
PHACTR4-204ENST00000493669 EFCAB6Q5THR3 1501 aa14.94□□□□□ -0.02
PHACTR4-204ENST00000493669 MAP3K4Q9Y6R4 1608 aa14.94□□□□□ -0.02
PHACTR4-204ENST00000493669 CLTCL1P53675 1640 aa14.93□□□□□ -0.02
PHACTR4-204ENST00000493669 RGL3Q3MIN7 710 aa14.92□□□□□ -0.02
PHACTR4-204ENST00000493669 PRKRIP1Q9H875 184 aaPredicted RBP14.92□□□□□ -0.02
PHACTR4-204ENST00000493669 FRMPD1Q5SYB0 1578 aa14.91□□□□□ -0.02
PHACTR4-204ENST00000493669 RIMBP3CA6NJZ7 1639 aa14.91□□□□□ -0.02
PHACTR4-204ENST00000493669 RIMBP3BA6NNM3 1639 aa14.91□□□□□ -0.02
PHACTR4-204ENST00000493669 RIMBP3Q9UFD9 1639 aa14.91□□□□□ -0.02
PHACTR4-204ENST00000493669 MADDQ8WXG6 1647 aa14.9□□□□□ -0.02
PHACTR4-204ENST00000493669 ST20-MTHFSA0A0A6YYL1 179 aa14.89□□□□□ -0.03
PHACTR4-204ENST00000493669 ABCA6Q8N139 1617 aa14.89□□□□□ -0.03
PHACTR4-204ENST00000493669 PPRC1Q5VV67 1664 aaKnown RBP14.89□□□□□ -0.03
PHACTR4-204ENST00000493669 RICTORQ6R327 1708 aa14.87□□□□□ -0.03
PHACTR4-204ENST00000493669 KIAA1210Q9ULL0 1709 aa14.86□□□□□ -0.03
PHACTR4-204ENST00000493669 MYOM2P54296 1465 aa14.85□□□□□ -0.03
PHACTR4-204ENST00000493669 DIP2CQ9Y2E4 1556 aa14.85□□□□□ -0.03
PHACTR4-204ENST00000493669 COL17A1Q9UMD9 1497 aaPredicted RBP14.85□□□□□ -0.03
PHACTR4-204ENST00000493669 NBPF1Q3BBV0 1214 aa14.85□□□□□ -0.03
PHACTR4-204ENST00000493669 KIF1BO60333 1816 aa14.85□□□□□ -0.03
PHACTR4-204ENST00000493669 KTN1Q86UP2 1357 aaKnown RBP14.84□□□□□ -0.03
PHACTR4-204ENST00000493669 CYB5RLQ6IPT4 315 aa14.83□□□□□ -0.04
PHACTR4-204ENST00000493669 IQGAP1P46940 1657 aa14.83□□□□□ -0.04
PHACTR4-204ENST00000493669 DIP2BQ9P265 1576 aa14.83□□□□□ -0.04
PHACTR4-204ENST00000493669 ABCC3O15438 1527 aa14.82□□□□□ -0.04
PHACTR4-204ENST00000493669 ZMYM4Q5VZL5 1548 aa14.82□□□□□ -0.04
PHACTR4-204ENST00000493669 ZC3H13Q5T200 1668 aaKnown RBP14.81□□□□□ -0.04
PHACTR4-204ENST00000493669 IFT172Q9UG01 1749 aa14.81□□□□□ -0.04
PHACTR4-204ENST00000493669 ADGRB3O60242 1522 aa14.8□□□□□ -0.04
PHACTR4-204ENST00000493669 NPATQ14207 1427 aa14.8□□□□□ -0.04
PHACTR4-204ENST00000493669 TESK2Q96S53 571 aa14.8□□□□□ -0.04
PHACTR4-204ENST00000493669 SCAF11Q99590 1463 aaKnown RBP14.8□□□□□ -0.04
PHACTR4-204ENST00000493669 POLR3GLQ9BT43 218 aa14.79□□□□□ -0.04
PHACTR4-204ENST00000493669 MRS2Q9HD23 443 aa14.79□□□□□ -0.04
PHACTR4-204ENST00000493669 CAMSAP1Q5T5Y3 1602 aa14.79□□□□□ -0.04
PHACTR4-204ENST00000493669 RAPGEF3O95398 923 aa14.79□□□□□ -0.04
PHACTR4-204ENST00000493669 NRXN1Q9ULB1 1477 aa14.78□□□□□ -0.04
PHACTR4-204ENST00000493669 ARHGAP31Q2M1Z3 1444 aa14.78□□□□□ -0.04
PHACTR4-204ENST00000493669 UGGT1Q9NYU2 1555 aa14.78□□□□□ -0.04
PHACTR4-204ENST00000493669 TMF1P82094 1093 aa14.77□□□□□ -0.04
PHACTR4-204ENST00000493669 EIF3AQ14152 1382 aaKnown RBP14.77□□□□□ -0.05
PHACTR4-204ENST00000493669 MROH2AA6NES4 1674 aa14.77□□□□□ -0.05
PHACTR4-204ENST00000493669 HNRNPUQ00839 825 aaKnown RBP eCLIP14.76□□□□□ -0.05
PHACTR4-204ENST00000493669 WASHC2CQ9Y4E1 1318 aa14.76□□□□□ -0.05
PHACTR4-204ENST00000493669 NOS1P29475 1434 aa14.76□□□□□ -0.05
PHACTR4-204ENST00000493669 RALBP1Q15311 655 aa14.76□□□□□ -0.05
PHACTR4-204ENST00000493669 CCDC184Q52MB2 194 aa14.76□□□□□ -0.05
PHACTR4-204ENST00000493669 GGT6Q6P531 493 aa14.75□□□□□ -0.05
PHACTR4-204ENST00000493669 DISP3Q9P2K9 1392 aa14.75□□□□□ -0.05
PHACTR4-204ENST00000493669 SLC24A1O60721 1099 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms