RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 POGKQ9P215 609 aa10.89□□□□□ -0.67
GBP3-208ENST00000493594 GAPVD1Q14C86 1478 aa10.88□□□□□ -0.67
GBP3-208ENST00000493594 KIF14Q15058 1648 aa10.87□□□□□ -0.67
GBP3-208ENST00000493594 PER1O15534 1290 aaPredicted RBP10.87□□□□□ -0.67
GBP3-208ENST00000493594 CFDP1Q9UEE9 299 aaPredicted RBP10.87□□□□□ -0.67
GBP3-208ENST00000493594 PARD3Q8TEW0 1356 aa10.87□□□□□ -0.67
GBP3-208ENST00000493594 ADAMTS8Q9UP79 889 aa10.86□□□□□ -0.67
GBP3-208ENST00000493594 DNMT1P26358 1616 aaKnown RBP10.86□□□□□ -0.67
GBP3-208ENST00000493594 SLKQ9H2G2 1235 aaPredicted RBP10.86□□□□□ -0.67
GBP3-208ENST00000493594 RALGAPBQ86X10 1494 aa10.85□□□□□ -0.67
GBP3-208ENST00000493594 RRAGDQ9NQL2 400 aaPredicted RBP10.85□□□□□ -0.67
GBP3-208ENST00000493594 NUP155O75694 1391 aa10.85□□□□□ -0.67
GBP3-208ENST00000493594 NBPF1Q3BBV0 1214 aa10.84□□□□□ -0.67
GBP3-208ENST00000493594 PANK3Q9H999 370 aa10.84□□□□□ -0.67
GBP3-208ENST00000493594 UHRF1BP1Q6BDS2 1440 aa10.84□□□□□ -0.67
GBP3-208ENST00000493594 RGL3Q3MIN7 710 aa10.84□□□□□ -0.67
GBP3-208ENST00000493594 DUSP27Q5VZP5 1158 aa10.83□□□□□ -0.68
GBP3-208ENST00000493594 SEC24BO95487 1268 aa10.82□□□□□ -0.68
GBP3-208ENST00000493594 LAMC3Q9Y6N6 1575 aa10.82□□□□□ -0.68
GBP3-208ENST00000493594 URB2Q14146 1524 aaKnown RBP10.81□□□□□ -0.68
GBP3-208ENST00000493594 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.81□□□□□ -0.68
GBP3-208ENST00000493594 KIAA0586Q9BVV6 1533 aa10.8□□□□□ -0.68
GBP3-208ENST00000493594 USP19O94966 1318 aa10.8□□□□□ -0.68
GBP3-208ENST00000493594 BLMP54132 1417 aaPredicted RBP10.8□□□□□ -0.68
GBP3-208ENST00000493594 WDR62O43379 1518 aa10.8□□□□□ -0.68
GBP3-208ENST00000493594 IGHDP01880 384 aa10.8□□□□□ -0.68
GBP3-208ENST00000493594 GOLGA2Q08379 1002 aa10.8□□□□□ -0.68
GBP3-208ENST00000493594 PLEKHH1Q9ULM0 1364 aa10.8□□□□□ -0.68
GBP3-208ENST00000493594 ANKRD50Q9ULJ7 1429 aa10.8□□□□□ -0.68
GBP3-208ENST00000493594 KIF21AQ7Z4S6 1674 aa10.79□□□□□ -0.68
GBP3-208ENST00000493594 BCAR3O75815 825 aa10.79□□□□□ -0.68
GBP3-208ENST00000493594 WDR43Q15061 677 aaKnown RBP eCLIP10.79□□□□□ -0.68
GBP3-208ENST00000493594 ANKRD30AQ9BXX3 1397 aa10.79□□□□□ -0.68
GBP3-208ENST00000493594 PRG4Q92954 1404 aaPredicted RBP10.79□□□□□ -0.68
GBP3-208ENST00000493594 CAMSAP2Q08AD1 1489 aa10.79□□□□□ -0.68
GBP3-208ENST00000493594 SPRYD3Q8NCJ5 442 aa10.78□□□□□ -0.68
GBP3-208ENST00000493594 NAP1L5Q96NT1 182 aaPredicted RBP10.78□□□□□ -0.68
GBP3-208ENST00000493594 GZF1Q9H116 711 aaPredicted RBP10.78□□□□□ -0.68
GBP3-208ENST00000493594 DISP3Q9P2K9 1392 aa10.78□□□□□ -0.68
GBP3-208ENST00000493594 ZMYM4Q5VZL5 1548 aa10.78□□□□□ -0.68
GBP3-208ENST00000493594 E9PCH4 1651 aa10.78□□□□□ -0.68
GBP3-208ENST00000493594 CCDC146Q8IYE0 955 aa10.77□□□□□ -0.68
GBP3-208ENST00000493594 PKNOX2Q96KN3 472 aa10.77□□□□□ -0.68
GBP3-208ENST00000493594 BECN1Q14457 450 aa10.77□□□□□ -0.69
GBP3-208ENST00000493594 L1TD1Q5T7N2 865 aaKnown RBP10.77□□□□□ -0.69
GBP3-208ENST00000493594 SPINK5Q9NQ38 1064 aaPredicted RBP10.77□□□□□ -0.69
GBP3-208ENST00000493594 IQGAP2Q13576 1575 aa10.77□□□□□ -0.69
GBP3-208ENST00000493594 VSIG10Q8N0Z9 540 aa10.76□□□□□ -0.69
GBP3-208ENST00000493594 XRCC6P12956 609 aaKnown RBP eCLIP10.75□□□□□ -0.69
GBP3-208ENST00000493594 TESK2Q96S53 571 aa10.75□□□□□ -0.69
GBP3-208ENST00000493594 SLFN5Q08AF3 891 aa10.75□□□□□ -0.69
GBP3-208ENST00000493594 PANK2Q9BZ23 570 aa10.75□□□□□ -0.69
GBP3-208ENST00000493594 PPP2R1AP30153 589 aa10.74□□□□□ -0.69
GBP3-208ENST00000493594 PDS5BQ9NTI5 1447 aa10.74□□□□□ -0.69
GBP3-208ENST00000493594 NUP153P49790 1475 aaKnown RBP10.74□□□□□ -0.69
GBP3-208ENST00000493594 GLIPR1L2Q4G1C9 344 aa10.74□□□□□ -0.69
GBP3-208ENST00000493594 PNNQ9H307 717 aaKnown RBP10.74□□□□□ -0.69
GBP3-208ENST00000493594 ARHGEF12Q9NZN5 1544 aa10.74□□□□□ -0.69
GBP3-208ENST00000493594 TSPY4P0CV99 314 aa10.73□□□□□ -0.69
GBP3-208ENST00000493594 TSPY10P0CW01 314 aa10.73□□□□□ -0.69
GBP3-208ENST00000493594 TMF1P82094 1093 aa10.73□□□□□ -0.69
GBP3-208ENST00000493594 PLEKHH2Q8IVE3 1493 aa10.73□□□□□ -0.69
GBP3-208ENST00000493594 ZNF608Q9ULD9 1512 aaPredicted RBP10.73□□□□□ -0.69
GBP3-208ENST00000493594 GPATCH8Q9UKJ3 1502 aaKnown RBP10.73□□□□□ -0.69
GBP3-208ENST00000493594 ZNF521Q96K83 1311 aa10.73□□□□□ -0.69
GBP3-208ENST00000493594 GOLGA6L3A6NEY3 463 aa10.73□□□□□ -0.69
GBP3-208ENST00000493594 COG6Q9Y2V7 657 aa10.73□□□□□ -0.69
GBP3-208ENST00000493594 KNSTRNQ9Y448 316 aa10.73□□□□□ -0.69
GBP3-208ENST00000493594 APAF1O14727 1248 aa10.72□□□□□ -0.69
GBP3-208ENST00000493594 ANTXR1Q9H6X2 564 aa10.72□□□□□ -0.69
GBP3-208ENST00000493594 PANK1Q8TE04 598 aa10.72□□□□□ -0.69
GBP3-208ENST00000493594 ZMYND15Q9H091 742 aa10.72□□□□□ -0.69
GBP3-208ENST00000493594 INSRP06213 1382 aa10.72□□□□□ -0.69
GBP3-208ENST00000493594 CANXP27824 592 aaKnown RBP10.72□□□□□ -0.69
GBP3-208ENST00000493594 HSP90AA2PQ14568 343 aaPredicted RBP10.72□□□□□ -0.69
GBP3-208ENST00000493594 PRAG1Q86YV5 1406 aa10.71□□□□□ -0.69
GBP3-208ENST00000493594 HNRNPMP52272 730 aaKnown RBP eCLIP10.71□□□□□ -0.69
GBP3-208ENST00000493594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.71□□□□□ -0.69
GBP3-208ENST00000493594 TBC1D2Q9BYX2 928 aa10.71□□□□□ -0.69
GBP3-208ENST00000493594 ADGRL2O95490 1459 aa10.71□□□□□ -0.7
GBP3-208ENST00000493594 DMRT2Q9Y5R5 561 aa10.71□□□□□ -0.7
GBP3-208ENST00000493594 ADGBQ8N7X0 1667 aa10.7□□□□□ -0.7
GBP3-208ENST00000493594 HSP90AA1P07900 732 aaKnown RBP10.7□□□□□ -0.7
GBP3-208ENST00000493594 TROQ12816 1431 aaPredicted RBP10.7□□□□□ -0.7
GBP3-208ENST00000493594 ERBINQ96RT1 1412 aa10.7□□□□□ -0.7
GBP3-208ENST00000493594 COL17A1Q9UMD9 1497 aaPredicted RBP10.7□□□□□ -0.7
GBP3-208ENST00000493594 CLUAP1Q96AJ1 413 aa10.7□□□□□ -0.7
GBP3-208ENST00000493594 UPF2Q9HAU5 1272 aaKnown RBP10.7□□□□□ -0.7
GBP3-208ENST00000493594 EIF3AQ14152 1382 aaKnown RBP10.69□□□□□ -0.7
GBP3-208ENST00000493594 MAPK8IP3Q9UPT6 1336 aa10.69□□□□□ -0.7
GBP3-208ENST00000493594 CCDC144AA2RUR9 1427 aa10.69□□□□□ -0.7
GBP3-208ENST00000493594 CLCN1P35523 988 aa10.69□□□□□ -0.7
GBP3-208ENST00000493594 TRMT2AQ8IZ69 625 aaKnown RBP10.69□□□□□ -0.7
GBP3-208ENST00000493594 C9orf84Q5VXU9 1444 aa10.68□□□□□ -0.7
GBP3-208ENST00000493594 MCM4P33991 863 aa10.68□□□□□ -0.7
GBP3-208ENST00000493594 CEP170Q5SW79 1584 aa10.67□□□□□ -0.7
GBP3-208ENST00000493594 FSD2A1L4K1 749 aa10.67□□□□□ -0.7
GBP3-208ENST00000493594 KDM5DQ9BY66 1539 aa10.67□□□□□ -0.7
GBP3-208ENST00000493594 CGNL1Q0VF96 1302 aa10.67□□□□□ -0.7
GBP3-208ENST00000493594 NKTRP30414 1462 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms