RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 E9PCH4 1651 aa9.14□□□□□ -0.95
VPS13B-205ENST00000493587 GPATCH8Q9UKJ3 1502 aaKnown RBP9.13□□□□□ -0.95
VPS13B-205ENST00000493587 UHRF1BP1LA0JNW5 1464 aa9.12□□□□□ -0.95
VPS13B-205ENST00000493587 PLB1Q6P1J6 1458 aa9.12□□□□□ -0.95
VPS13B-205ENST00000493587 ABCA9Q8IUA7 1624 aa9.12□□□□□ -0.95
VPS13B-205ENST00000493587 TEX14Q8IWB6 1497 aa9.12□□□□□ -0.95
VPS13B-205ENST00000493587 ATP10BO94823 1461 aa9.11□□□□□ -0.95
VPS13B-205ENST00000493587 P3H3Q8IVL6 736 aa9.11□□□□□ -0.95
VPS13B-205ENST00000493587 ABCC5O15440 1437 aa9.11□□□□□ -0.95
VPS13B-205ENST00000493587 DAPK1P53355 1430 aa9.11□□□□□ -0.95
VPS13B-205ENST00000493587 PTPRGP23470 1445 aa9.11□□□□□ -0.95
VPS13B-205ENST00000493587 PZPP20742 1482 aa9.11□□□□□ -0.95
VPS13B-205ENST00000493587 CAMSAP2Q08AD1 1489 aa9.11□□□□□ -0.95
VPS13B-205ENST00000493587 ARAP3Q8WWN8 1544 aa9.1□□□□□ -0.95
VPS13B-205ENST00000493587 TROQ12816 1431 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-205ENST00000493587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPS13B-205ENST00000493587 IQGAP3Q86VI3 1631 aa9.09□□□□□ -0.95
VPS13B-205ENST00000493587 ABCC2Q92887 1545 aa9.09□□□□□ -0.95
VPS13B-205ENST00000493587 LAMC1P11047 1609 aa9.09□□□□□ -0.95
VPS13B-205ENST00000493587 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
VPS13B-205ENST00000493587 IFT172Q9UG01 1749 aa9.08□□□□□ -0.96
VPS13B-205ENST00000493587 ARID3AQ99856 593 aa9.08□□□□□ -0.96
VPS13B-205ENST00000493587 RRAGDQ9NQL2 400 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-205ENST00000493587 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-205ENST00000493587 NFKBIBQ15653 356 aa9.07□□□□□ -0.96
VPS13B-205ENST00000493587 CALD1Q05682 793 aaKnown RBP9.07□□□□□ -0.96
VPS13B-205ENST00000493587 VWDEQ8N2E2 1590 aa9.07□□□□□ -0.96
VPS13B-205ENST00000493587 ZHX1Q9UKY1 873 aaPredicted RBP9.06□□□□□ -0.96
VPS13B-205ENST00000493587 RNF17Q9BXT8 1623 aaKnown RBP9.06□□□□□ -0.96
VPS13B-205ENST00000493587 NCLP19338 710 aaKnown RBP9.06□□□□□ -0.96
VPS13B-205ENST00000493587 INO80Q9ULG1 1556 aaPredicted RBP9.06□□□□□ -0.96
VPS13B-205ENST00000493587 DCAF11Q8TEB1 546 aa9.06□□□□□ -0.96
VPS13B-205ENST00000493587 MROH1Q8NDA8 1641 aa9.05□□□□□ -0.96
VPS13B-205ENST00000493587 NEURL4Q96JN8 1562 aa9.05□□□□□ -0.96
VPS13B-205ENST00000493587 CHMP4AQ9BY43 222 aa9.04□□□□□ -0.96
VPS13B-205ENST00000493587 CEP152O94986 1710 aa9.03□□□□□ -0.96
VPS13B-205ENST00000493587 KDM5CP41229 1560 aa9.03□□□□□ -0.96
VPS13B-205ENST00000493587 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
VPS13B-205ENST00000493587 GTF2E1P29083 439 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-205ENST00000493587 IPO4Q8TEX9 1081 aaKnown RBP9.03□□□□□ -0.96
VPS13B-205ENST00000493587 PDCL3Q9H2J4 239 aa9.03□□□□□ -0.96
VPS13B-205ENST00000493587 TRPM1Q7Z4N2 1603 aa9.03□□□□□ -0.96
VPS13B-205ENST00000493587 ABCC1P33527 1531 aa9.03□□□□□ -0.96
VPS13B-205ENST00000493587 PRG4Q92954 1404 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-205ENST00000493587 CDK11BP21127 795 aaKnown RBP9.03□□□□□ -0.96
VPS13B-205ENST00000493587 SIN3AQ96ST3 1273 aa9.02□□□□□ -0.97
VPS13B-205ENST00000493587 RPRD2Q5VT52 1461 aaKnown RBP9.02□□□□□ -0.97
VPS13B-205ENST00000493587 TNNT2P45379 298 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-205ENST00000493587 PRDM4Q9UKN5 801 aa9.01□□□□□ -0.97
VPS13B-205ENST00000493587 SPATA31E1Q6ZUB1 1445 aa9.01□□□□□ -0.97
VPS13B-205ENST00000493587 EIF2AK4Q9P2K8 1649 aaKnown RBP9.01□□□□□ -0.97
VPS13B-205ENST00000493587 ARHGEF12Q9NZN5 1544 aa9.01□□□□□ -0.97
VPS13B-205ENST00000493587 NCOA1Q15788 1441 aa9.01□□□□□ -0.97
VPS13B-205ENST00000493587 VGLL3A8MV65 326 aa9.01□□□□□ -0.97
VPS13B-205ENST00000493587 CCER2I3L3R5 266 aa9□□□□□ -0.97
VPS13B-205ENST00000493587 SLC4A3P48751 1232 aa9□□□□□ -0.97
VPS13B-205ENST00000493587 DDRGK1Q96HY6 314 aa9□□□□□ -0.97
VPS13B-205ENST00000493587 HIRIP3Q9BW71 556 aaPredicted RBP9□□□□□ -0.97
VPS13B-205ENST00000493587 STAC3Q96MF2 364 aa9□□□□□ -0.97
VPS13B-205ENST00000493587 L1TD1Q5T7N2 865 aaKnown RBP8.99□□□□□ -0.97
VPS13B-205ENST00000493587 ANP32BQ92688 251 aaKnown RBP8.99□□□□□ -0.97
VPS13B-205ENST00000493587 RSPH4AQ5TD94 716 aa8.99□□□□□ -0.97
VPS13B-205ENST00000493587 SPHKAPQ2M3C7 1700 aa8.99□□□□□ -0.97
VPS13B-205ENST00000493587 ZFP91Q96JP5 570 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-205ENST00000493587 ATP10AO60312 1499 aa8.98□□□□□ -0.97
VPS13B-205ENST00000493587 MTUS2Q5JR59 1369 aa8.98□□□□□ -0.97
VPS13B-205ENST00000493587 ANKRD30BQ9BXX2 1392 aa8.98□□□□□ -0.97
VPS13B-205ENST00000493587 CHMP7Q8WUX9 453 aaPredicted RBP8.97□□□□□ -0.97
VPS13B-205ENST00000493587 PRDM10Q9NQV6 1147 aa8.97□□□□□ -0.97
VPS13B-205ENST00000493587 IQGAP1P46940 1657 aa8.97□□□□□ -0.97
VPS13B-205ENST00000493587 FRAT2O75474 233 aaPredicted RBP8.97□□□□□ -0.97
VPS13B-205ENST00000493587 ZFYVE16Q7Z3T8 1539 aa8.96□□□□□ -0.97
VPS13B-205ENST00000493587 UHRF1BP1Q6BDS2 1440 aa8.96□□□□□ -0.97
VPS13B-205ENST00000493587 KIDINS220Q9ULH0 1771 aa8.96□□□□□ -0.97
VPS13B-205ENST00000493587 KIAA1210Q9ULL0 1709 aa8.96□□□□□ -0.98
VPS13B-205ENST00000493587 MAPK8IP2Q13387 824 aaPredicted RBP8.96□□□□□ -0.98
VPS13B-205ENST00000493587 JPH4Q96JJ6 628 aa8.96□□□□□ -0.98
VPS13B-205ENST00000493587 FAM13BQ9NYF5 915 aa8.96□□□□□ -0.98
VPS13B-205ENST00000493587 ZC3H13Q5T200 1668 aaKnown RBP8.95□□□□□ -0.98
VPS13B-205ENST00000493587 PPRC1Q5VV67 1664 aaKnown RBP8.95□□□□□ -0.98
VPS13B-205ENST00000493587 CLCN1P35523 988 aa8.95□□□□□ -0.98
VPS13B-205ENST00000493587 TPM2P07951 284 aa8.94□□□□□ -0.98
VPS13B-205ENST00000493587 FTSJ3Q8IY81 847 aaKnown RBP8.94□□□□□ -0.98
VPS13B-205ENST00000493587 CARMIL2Q6F5E8 1435 aa8.94□□□□□ -0.98
VPS13B-205ENST00000493587 SYCP2Q9BX26 1530 aa8.94□□□□□ -0.98
VPS13B-205ENST00000493587 MAP3K4Q9Y6R4 1608 aa8.94□□□□□ -0.98
VPS13B-205ENST00000493587 TRIM44Q96DX7 344 aaPredicted RBP8.93□□□□□ -0.98
VPS13B-205ENST00000493587 KIAA1107Q9UPP5 1409 aa8.93□□□□□ -0.98
VPS13B-205ENST00000493587 PDE4AP27815 886 aa8.93□□□□□ -0.98
VPS13B-205ENST00000493587 RICTORQ6R327 1708 aa8.92□□□□□ -0.98
VPS13B-205ENST00000493587 WDR7Q9Y4E6 1490 aa8.92□□□□□ -0.98
VPS13B-205ENST00000493587 PRDM15P57071 1507 aaPredicted RBP8.92□□□□□ -0.98
VPS13B-205ENST00000493587 MYOM1P52179 1685 aa8.92□□□□□ -0.98
VPS13B-205ENST00000493587 DNTTIP2Q5QJE6 756 aaKnown RBP8.92□□□□□ -0.98
VPS13B-205ENST00000493587 FAM9BQ8IZU0 186 aa8.92□□□□□ -0.98
VPS13B-205ENST00000493587 TET3O43151 1660 aa8.92□□□□□ -0.98
VPS13B-205ENST00000493587 TULP1O00294 542 aaPredicted RBP8.92□□□□□ -0.98
VPS13B-205ENST00000493587 PLA2R1Q13018 1463 aa8.92□□□□□ -0.98
VPS13B-205ENST00000493587 FOXD1Q16676 465 aa8.91□□□□□ -0.98
VPS13B-205ENST00000493587 PPP1R15AO75807 674 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms