RNA–Protein interactions for RNA: ENST00000493409.5

CCSER2-206, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 5

Gene CCSER2, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-206ENST00000493409 BCAMP50895 628 aa13.65□□□□□ -0.22
CCSER2-206ENST00000493409 LAPTM4BQ86VI4 370 aa13.65□□□□□ -0.22
CCSER2-206ENST00000493409 SOWAHBA6NEL2 793 aa13.64□□□□□ -0.23
CCSER2-206ENST00000493409 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
CCSER2-206ENST00000493409 PHF14O94880 888 aa13.63□□□□□ -0.23
CCSER2-206ENST00000493409 TYW1BQ6NUM6 668 aa13.63□□□□□ -0.23
CCSER2-206ENST00000493409 KIAA1468Q9P260 1216 aa13.6□□□□□ -0.23
CCSER2-206ENST00000493409 NYAP1Q6ZVC0 841 aa13.59□□□□□ -0.23
CCSER2-206ENST00000493409 ZFRQ96KR1 1074 aaKnown RBP13.59□□□□□ -0.23
CCSER2-206ENST00000493409 ONECUT3O60422 494 aaPredicted RBP13.57□□□□□ -0.24
CCSER2-206ENST00000493409 WBP1LQ9NX94 342 aa13.57□□□□□ -0.24
CCSER2-206ENST00000493409 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
CCSER2-206ENST00000493409 C6orf132Q5T0Z8 1188 aa13.54□□□□□ -0.24
CCSER2-206ENST00000493409 SEPT9Q9UHD8 586 aaPredicted RBP13.53□□□□□ -0.24
CCSER2-206ENST00000493409 KCNC4Q03721 635 aa13.51□□□□□ -0.25
CCSER2-206ENST00000493409 CAMK2BQ13554 666 aa13.51□□□□□ -0.25
CCSER2-206ENST00000493409 EPAS1Q99814 870 aa13.51□□□□□ -0.25
CCSER2-206ENST00000493409 TRIM6-TRIM34B2RNG4 842 aa13.5□□□□□ -0.25
CCSER2-206ENST00000493409 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
CCSER2-206ENST00000493409 Q6ZNB5 142 aa13.48□□□□□ -0.25
CCSER2-206ENST00000493409 DPYSL4O14531 572 aa13.45□□□□□ -0.26
CCSER2-206ENST00000493409 TSR3Q9UJK0 312 aaKnown RBP13.45□□□□□ -0.26
CCSER2-206ENST00000493409 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.44□□□□□ -0.26
CCSER2-206ENST00000493409 LRCH3Q96II8 777 aa13.42□□□□□ -0.26
CCSER2-206ENST00000493409 HPS5Q9UPZ3 1129 aa13.42□□□□□ -0.26
CCSER2-206ENST00000493409 RBM33Q96EV2 1170 aaKnown RBP13.41□□□□□ -0.26
CCSER2-206ENST00000493409 LCE2BO14633 110 aa13.4□□□□□ -0.26
CCSER2-206ENST00000493409 DDX12PQ92771 950 aa13.38□□□□□ -0.27
CCSER2-206ENST00000493409 TSKSQ9UJT2 592 aa13.38□□□□□ -0.27
CCSER2-206ENST00000493409 LAPTM4AQ15012 233 aa13.36□□□□□ -0.27
CCSER2-206ENST00000493409 EN1Q05925 392 aaPredicted RBP13.35□□□□□ -0.27
CCSER2-206ENST00000493409 TSR1Q2NL82 804 aaKnown RBP13.33□□□□□ -0.28
CCSER2-206ENST00000493409 TJAP1Q5JTD0 557 aa13.32□□□□□ -0.28
CCSER2-206ENST00000493409 PACS2Q86VP3 889 aa13.32□□□□□ -0.28
CCSER2-206ENST00000493409 NBR1Q14596 966 aa13.3□□□□□ -0.28
CCSER2-206ENST00000493409 PPP4CP60510 307 aa13.29□□□□□ -0.28
CCSER2-206ENST00000493409 MAP3K7O43318 606 aa13.28□□□□□ -0.28
CCSER2-206ENST00000493409 GFRA3O60609 400 aa13.28□□□□□ -0.28
CCSER2-206ENST00000493409 PDIA6Q15084 440 aa13.28□□□□□ -0.28
CCSER2-206ENST00000493409 DCAF8L2P0C7V8 631 aa13.27□□□□□ -0.29
CCSER2-206ENST00000493409 FAM198AQ9UFP1 575 aa13.27□□□□□ -0.29
CCSER2-206ENST00000493409 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
CCSER2-206ENST00000493409 SAMD7Q7Z3H4 446 aa13.26□□□□□ -0.29
CCSER2-206ENST00000493409 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
CCSER2-206ENST00000493409 C3orf80F5H4A9 247 aa13.24□□□□□ -0.29
CCSER2-206ENST00000493409 SMAPO00193 183 aa13.24□□□□□ -0.29
CCSER2-206ENST00000493409 MTRQ99707 1265 aa13.23□□□□□ -0.29
CCSER2-206ENST00000493409 PRKD2Q9BZL6 878 aa13.23□□□□□ -0.29
CCSER2-206ENST00000493409 PRSS12P56730 875 aa13.22□□□□□ -0.29
CCSER2-206ENST00000493409 PRIM1P49642 420 aaKnown RBP13.21□□□□□ -0.29
CCSER2-206ENST00000493409 NRG2O14511 850 aaPredicted RBP13.2□□□□□ -0.3
CCSER2-206ENST00000493409 PPP1R18Q6NYC8 613 aa13.2□□□□□ -0.3
CCSER2-206ENST00000493409 IL21Q9HBE4 155 aa13.2□□□□□ -0.3
CCSER2-206ENST00000493409 SPDYE16A6NNV3 312 aaPredicted RBP13.19□□□□□ -0.3
CCSER2-206ENST00000493409 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
CCSER2-206ENST00000493409 CERKQ8TCT0 537 aa13.17□□□□□ -0.3
CCSER2-206ENST00000493409 TATDN2Q93075 761 aa13.17□□□□□ -0.3
CCSER2-206ENST00000493409 ZNF516Q92618 1163 aa13.16□□□□□ -0.3
CCSER2-206ENST00000493409 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
CCSER2-206ENST00000493409 PNMA3Q9UL41 463 aa13.14□□□□□ -0.31
CCSER2-206ENST00000493409 APLP1P51693 650 aa13.12□□□□□ -0.31
CCSER2-206ENST00000493409 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.12□□□□□ -0.31
CCSER2-206ENST00000493409 ARIH1Q9Y4X5 557 aaPredicted RBP13.1□□□□□ -0.31
CCSER2-206ENST00000493409 RBM27Q9P2N5 1060 aaKnown RBP13.09□□□□□ -0.31
CCSER2-206ENST00000493409 NUDT18Q6ZVK8 323 aa13.08□□□□□ -0.32
CCSER2-206ENST00000493409 NKX2-3Q8TAU0 364 aa13.08□□□□□ -0.32
CCSER2-206ENST00000493409 CDHR5Q9HBB8 845 aa13.08□□□□□ -0.32
CCSER2-206ENST00000493409 GRXCR2A6NFK2 248 aa13.07□□□□□ -0.32
CCSER2-206ENST00000493409 OSBPP22059 807 aa13.06□□□□□ -0.32
CCSER2-206ENST00000493409 RNF40O75150 1001 aa13.05□□□□□ -0.32
CCSER2-206ENST00000493409 E2F4Q16254 413 aa13.05□□□□□ -0.32
CCSER2-206ENST00000493409 TTC13Q8NBP0 860 aa13.04□□□□□ -0.32
CCSER2-206ENST00000493409 BBXQ8WY36 941 aaPredicted RBP13.04□□□□□ -0.32
CCSER2-206ENST00000493409 PDZRN3Q9UPQ7 1066 aa13.04□□□□□ -0.32
CCSER2-206ENST00000493409 HDGFP51858 240 aaKnown RBP13.02□□□□□ -0.33
CCSER2-206ENST00000493409 SWT1Q5T5J6 900 aaKnown RBP12.99□□□□□ -0.33
CCSER2-206ENST00000493409 NPDC1Q9NQX5 325 aaPredicted RBP12.99□□□□□ -0.33
CCSER2-206ENST00000493409 COPS2P61201 443 aa12.98□□□□□ -0.33
CCSER2-206ENST00000493409 ZNF787Q6DD87 383 aa12.98□□□□□ -0.33
CCSER2-206ENST00000493409 NECTIN2Q92692 538 aa12.98□□□□□ -0.33
CCSER2-206ENST00000493409 TMUB1Q9BVT8 246 aa12.98□□□□□ -0.33
CCSER2-206ENST00000493409 GGCXP38435 758 aa12.97□□□□□ -0.33
CCSER2-206ENST00000493409 SLF2Q8IX21 1173 aa12.96□□□□□ -0.33
CCSER2-206ENST00000493409 PADI6Q6TGC4 694 aa12.95□□□□□ -0.34
CCSER2-206ENST00000493409 ZPR1O75312 459 aa12.94□□□□□ -0.34
CCSER2-206ENST00000493409 TRIM67Q6ZTA4 783 aa12.94□□□□□ -0.34
CCSER2-206ENST00000493409 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
CCSER2-206ENST00000493409 EYA1Q99502 592 aa12.92□□□□□ -0.34
CCSER2-206ENST00000493409 SPRYD3Q8NCJ5 442 aa12.91□□□□□ -0.34
CCSER2-206ENST00000493409 ZNF775Q96BV0 537 aaPredicted RBP12.91□□□□□ -0.34
CCSER2-206ENST00000493409 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
CCSER2-206ENST00000493409 WDR70Q9NW82 654 aa12.86□□□□□ -0.35
CCSER2-206ENST00000493409 PCDHB3Q9Y5E6 796 aa12.86□□□□□ -0.35
CCSER2-206ENST00000493409 SLC19A1P41440 591 aa12.85□□□□□ -0.35
CCSER2-206ENST00000493409 BLOC1S3Q6QNY0 202 aa12.85□□□□□ -0.35
CCSER2-206ENST00000493409 PRR14Q9BWN1 585 aa12.85□□□□□ -0.35
CCSER2-206ENST00000493409 SLC4A3P48751 1232 aa12.83□□□□□ -0.36
CCSER2-206ENST00000493409 MYT1Q01538 1121 aa12.81□□□□□ -0.36
CCSER2-206ENST00000493409 SPRYD7Q5W111 196 aa12.81□□□□□ -0.36
CCSER2-206ENST00000493409 TLL1O43897 1013 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms