RNA–Protein interactions for RNA: ENST00000493394.1

RGPD5-211, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2

Gene RGPD5, Length 960 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-211ENST00000493394 SNPHO15079 494 aa11.36□□□□□ -0.59
RGPD5-211ENST00000493394 MAPKBP1O60336 1514 aa11.35□□□□□ -0.59
RGPD5-211ENST00000493394 EPRSP07814 1512 aaKnown RBP11.35□□□□□ -0.59
RGPD5-211ENST00000493394 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
RGPD5-211ENST00000493394 CCDC18Q5T9S5 1454 aa11.35□□□□□ -0.59
RGPD5-211ENST00000493394 PYGBP11216 843 aa11.34□□□□□ -0.59
RGPD5-211ENST00000493394 PPARGC1BQ86YN6 1023 aaKnown RBP11.34□□□□□ -0.59
RGPD5-211ENST00000493394 CFDP1Q9UEE9 299 aaPredicted RBP11.34□□□□□ -0.59
RGPD5-211ENST00000493394 HECW1Q76N89 1606 aa11.34□□□□□ -0.59
RGPD5-211ENST00000493394 VPS8Q8N3P4 1428 aa11.34□□□□□ -0.59
RGPD5-211ENST00000493394 ZCCHC11Q5TAX3 1644 aaKnown RBP11.33□□□□□ -0.6
RGPD5-211ENST00000493394 FYCO1Q9BQS8 1478 aa11.32□□□□□ -0.6
RGPD5-211ENST00000493394 CDK13Q14004 1512 aaKnown RBP11.32□□□□□ -0.6
RGPD5-211ENST00000493394 CCNB3Q8WWL7 1395 aa11.31□□□□□ -0.6
RGPD5-211ENST00000493394 SPOCK2Q92563 424 aa11.31□□□□□ -0.6
RGPD5-211ENST00000493394 TEX14Q8IWB6 1497 aa11.31□□□□□ -0.6
RGPD5-211ENST00000493394 TROQ12816 1431 aaPredicted RBP11.3□□□□□ -0.6
RGPD5-211ENST00000493394 GSE1Q14687 1217 aa11.3□□□□□ -0.6
RGPD5-211ENST00000493394 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
RGPD5-211ENST00000493394 ARID4BQ4LE39 1312 aaPredicted RBP11.28□□□□□ -0.6
RGPD5-211ENST00000493394 RAPGEF3O95398 923 aa11.27□□□□□ -0.61
RGPD5-211ENST00000493394 KANK4Q5T7N3 995 aaPredicted RBP11.27□□□□□ -0.61
RGPD5-211ENST00000493394 MARVELD3Q96A59 401 aa11.27□□□□□ -0.61
RGPD5-211ENST00000493394 PHLDB1Q86UU1 1377 aa11.27□□□□□ -0.61
RGPD5-211ENST00000493394 PCF11O94913 1555 aaKnown RBP11.25□□□□□ -0.61
RGPD5-211ENST00000493394 TSPY4P0CV99 314 aa11.25□□□□□ -0.61
RGPD5-211ENST00000493394 TSPY10P0CW01 314 aa11.25□□□□□ -0.61
RGPD5-211ENST00000493394 CHRM1P11229 460 aaPredicted RBP11.25□□□□□ -0.61
RGPD5-211ENST00000493394 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
RGPD5-211ENST00000493394 HNRNPMP52272 730 aaKnown RBP eCLIP11.24□□□□□ -0.61
RGPD5-211ENST00000493394 PCDHB8Q9UN66 801 aa11.24□□□□□ -0.61
RGPD5-211ENST00000493394 GLI2P10070 1586 aa11.24□□□□□ -0.61
RGPD5-211ENST00000493394 DIP2BQ9P265 1576 aa11.24□□□□□ -0.61
RGPD5-211ENST00000493394 PLCH2O75038 1416 aa11.23□□□□□ -0.61
RGPD5-211ENST00000493394 ARHGAP5Q13017 1502 aa11.22□□□□□ -0.61
RGPD5-211ENST00000493394 FANCAO15360 1455 aa11.21□□□□□ -0.61
RGPD5-211ENST00000493394 AKNAQ7Z591 1439 aa11.21□□□□□ -0.61
RGPD5-211ENST00000493394 AFAP1Q8N556 730 aa11.21□□□□□ -0.61
RGPD5-211ENST00000493394 ESF1Q9H501 851 aaKnown RBP11.21□□□□□ -0.61
RGPD5-211ENST00000493394 TSPOAP1O95153 1857 aa11.21□□□□□ -0.62
RGPD5-211ENST00000493394 KIF14Q15058 1648 aa11.2□□□□□ -0.62
RGPD5-211ENST00000493394 SCAPERQ9BY12 1400 aa11.2□□□□□ -0.62
RGPD5-211ENST00000493394 ITGAEP38570 1179 aa11.2□□□□□ -0.62
RGPD5-211ENST00000493394 RSPH4AQ5TD94 716 aa11.2□□□□□ -0.62
RGPD5-211ENST00000493394 MAGI3Q5TCQ9 1506 aa11.19□□□□□ -0.62
RGPD5-211ENST00000493394 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
RGPD5-211ENST00000493394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.18□□□□□ -0.62
RGPD5-211ENST00000493394 DENND4BO75064 1496 aaPredicted RBP11.18□□□□□ -0.62
RGPD5-211ENST00000493394 LRRC9Q6ZRR7 1453 aa11.18□□□□□ -0.62
RGPD5-211ENST00000493394 SPAG9O60271 1321 aaKnown RBP11.17□□□□□ -0.62
RGPD5-211ENST00000493394 ZNF644Q9H582 1327 aaPredicted RBP11.17□□□□□ -0.62
RGPD5-211ENST00000493394 NEO1Q92859 1461 aa11.17□□□□□ -0.62
RGPD5-211ENST00000493394 MLECQ14165 292 aa11.16□□□□□ -0.62
RGPD5-211ENST00000493394 PDCD7Q8N8D1 485 aaKnown RBP11.16□□□□□ -0.62
RGPD5-211ENST00000493394 ADGRL1O94910 1474 aa11.16□□□□□ -0.62
RGPD5-211ENST00000493394 EHBP1L1Q8N3D4 1523 aa11.15□□□□□ -0.62
RGPD5-211ENST00000493394 NCOA2Q15596 1464 aa11.15□□□□□ -0.62
RGPD5-211ENST00000493394 EMP3P54852 163 aa11.15□□□□□ -0.62
RGPD5-211ENST00000493394 ZNF467Q7Z7K2 595 aaPredicted RBP11.15□□□□□ -0.62
RGPD5-211ENST00000493394 KDM6BO15054 1643 aa11.15□□□□□ -0.62
RGPD5-211ENST00000493394 TIAM1Q13009 1591 aa11.15□□□□□ -0.62
RGPD5-211ENST00000493394 CFAP43Q8NDM7 1665 aa11.14□□□□□ -0.63
RGPD5-211ENST00000493394 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
RGPD5-211ENST00000493394 GPATCH8Q9UKJ3 1502 aaKnown RBP11.14□□□□□ -0.63
RGPD5-211ENST00000493394 ABCA9Q8IUA7 1624 aa11.13□□□□□ -0.63
RGPD5-211ENST00000493394 L3MBTL3Q96JM7 780 aaPredicted RBP11.13□□□□□ -0.63
RGPD5-211ENST00000493394 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
RGPD5-211ENST00000493394 KRTAP3-2Q9BYR7 98 aa11.13□□□□□ -0.63
RGPD5-211ENST00000493394 CHIC2Q9UKJ5 165 aa11.13□□□□□ -0.63
RGPD5-211ENST00000493394 KIF13AQ9H1H9 1805 aa11.13□□□□□ -0.63
RGPD5-211ENST00000493394 MAP3K4Q9Y6R4 1608 aa11.13□□□□□ -0.63
RGPD5-211ENST00000493394 PLEKHH2Q8IVE3 1493 aa11.12□□□□□ -0.63
RGPD5-211ENST00000493394 POTEB3A0JP26 581 aa11.12□□□□□ -0.63
RGPD5-211ENST00000493394 POTEBQ6S5H4 581 aa11.12□□□□□ -0.63
RGPD5-211ENST00000493394 C3orf67Q6ZVT6 689 aa11.11□□□□□ -0.63
RGPD5-211ENST00000493394 HS3ST6Q96QI5 342 aa11.11□□□□□ -0.63
RGPD5-211ENST00000493394 TTC37Q6PGP7 1564 aa11.1□□□□□ -0.63
RGPD5-211ENST00000493394 MYOM3Q5VTT5 1437 aa11.09□□□□□ -0.63
RGPD5-211ENST00000493394 ARAP3Q8WWN8 1544 aa11.09□□□□□ -0.63
RGPD5-211ENST00000493394 SUPT6HQ7KZ85 1726 aaKnown RBP11.09□□□□□ -0.63
RGPD5-211ENST00000493394 RRP7BPQ9NSQ0 103 aa11.09□□□□□ -0.63
RGPD5-211ENST00000493394 CFAP74Q9C0B2 1584 aa11.08□□□□□ -0.64
RGPD5-211ENST00000493394 GGT6Q6P531 493 aa11.08□□□□□ -0.64
RGPD5-211ENST00000493394 MIA2Q96PC5 1412 aa11.08□□□□□ -0.64
RGPD5-211ENST00000493394 COL17A1Q9UMD9 1497 aaPredicted RBP11.07□□□□□ -0.64
RGPD5-211ENST00000493394 FAM205CA6NFA0 338 aa11.07□□□□□ -0.64
RGPD5-211ENST00000493394 PSEN1P49768 467 aa11.07□□□□□ -0.64
RGPD5-211ENST00000493394 POGZQ7Z3K3 1410 aa11.07□□□□□ -0.64
RGPD5-211ENST00000493394 KIAA1107Q9UPP5 1409 aa11.07□□□□□ -0.64
RGPD5-211ENST00000493394 ZNF518AQ6AHZ1 1483 aa11.06□□□□□ -0.64
RGPD5-211ENST00000493394 MYO5CQ9NQX4 1742 aa11.06□□□□□ -0.64
RGPD5-211ENST00000493394 KIF3BO15066 747 aa11.05□□□□□ -0.64
RGPD5-211ENST00000493394 MKRN3Q13064 507 aaKnown RBP11.05□□□□□ -0.64
RGPD5-211ENST00000493394 TRAPPC8Q9Y2L5 1435 aa11.05□□□□□ -0.64
RGPD5-211ENST00000493394 LRRIQ1Q96JM4 1722 aa11.04□□□□□ -0.64
RGPD5-211ENST00000493394 PDAP1Q13442 181 aaKnown RBP11.04□□□□□ -0.64
RGPD5-211ENST00000493394 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
RGPD5-211ENST00000493394 MAGI2Q86UL8 1455 aa11.03□□□□□ -0.64
RGPD5-211ENST00000493394 FGD6Q6ZV73 1430 aa11.02□□□□□ -0.64
RGPD5-211ENST00000493394 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms