RNA–Protein interactions for RNA: ENST00000493212.1

PHTF1-212, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 956 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-212ENST00000493212 MAP3K1Q13233 1512 aa32.97■■■□□ 2.87
PHTF1-212ENST00000493212 KDM5DQ9BY66 1539 aa32.96■■■□□ 2.87
PHTF1-212ENST00000493212 A2ML1A8K2U0 1454 aa32.94■■■□□ 2.86
PHTF1-212ENST00000493212 PKD2Q13563 968 aa32.94■■■□□ 2.86
PHTF1-212ENST00000493212 PZPP20742 1482 aa32.92■■■□□ 2.86
PHTF1-212ENST00000493212 DNMT1P26358 1616 aaKnown RBP32.91■■■□□ 2.86
PHTF1-212ENST00000493212 KANK4Q5T7N3 995 aaPredicted RBP32.9■■■□□ 2.86
PHTF1-212ENST00000493212 MAST1Q9Y2H9 1570 aa32.89■■■□□ 2.86
PHTF1-212ENST00000493212 TSPY4P0CV99 314 aa32.88■■■□□ 2.85
PHTF1-212ENST00000493212 TSPY10P0CW01 314 aa32.88■■■□□ 2.85
PHTF1-212ENST00000493212 FBXO31Q5XUX0 539 aaPredicted RBP32.87■■■□□ 2.85
PHTF1-212ENST00000493212 TNRQ92752 1358 aa32.85■■■□□ 2.85
PHTF1-212ENST00000493212 ZNF335Q9H4Z2 1342 aaPredicted RBP32.85■■■□□ 2.85
PHTF1-212ENST00000493212 MIA2Q96PC5 1412 aa32.85■■■□□ 2.85
PHTF1-212ENST00000493212 WASHC2CQ9Y4E1 1318 aa32.84■■■□□ 2.85
PHTF1-212ENST00000493212 MYOM3Q5VTT5 1437 aa32.84■■■□□ 2.85
PHTF1-212ENST00000493212 RNF17Q9BXT8 1623 aaKnown RBP32.83■■■□□ 2.85
PHTF1-212ENST00000493212 EIF2AK4Q9P2K8 1649 aaKnown RBP32.77■■■□□ 2.84
PHTF1-212ENST00000493212 NEURL4Q96JN8 1562 aa32.76■■■□□ 2.84
PHTF1-212ENST00000493212 NLRP1Q9C000 1473 aa32.74■■■□□ 2.83
PHTF1-212ENST00000493212 POLR1AO95602 1720 aaPredicted RBP32.74■■■□□ 2.83
PHTF1-212ENST00000493212 ABCC3O15438 1527 aa32.74■■■□□ 2.83
PHTF1-212ENST00000493212 MROH1Q8NDA8 1641 aa32.73■■■□□ 2.83
PHTF1-212ENST00000493212 ZC3H13Q5T200 1668 aaKnown RBP32.73■■■□□ 2.83
PHTF1-212ENST00000493212 SPATA31D1Q6ZQQ2 1576 aa32.68■■■□□ 2.82
PHTF1-212ENST00000493212 UGGT1Q9NYU2 1555 aa32.67■■■□□ 2.82
PHTF1-212ENST00000493212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.66■■■□□ 2.82
PHTF1-212ENST00000493212 DUOX2Q9NRD8 1548 aa32.66■■■□□ 2.82
PHTF1-212ENST00000493212 THEMISQ8N1K5 641 aaPredicted RBP32.64■■■□□ 2.82
PHTF1-212ENST00000493212 SHANK2Q9UPX8 1470 aa32.64■■■□□ 2.82
PHTF1-212ENST00000493212 CROCC2H7BZ55 1655 aa32.62■■■□□ 2.81
PHTF1-212ENST00000493212 DEPDC5O75140 1603 aa32.62■■■□□ 2.81
PHTF1-212ENST00000493212 MED14O60244 1454 aa32.62■■■□□ 2.81
PHTF1-212ENST00000493212 ABCC5O15440 1437 aa32.62■■■□□ 2.81
PHTF1-212ENST00000493212 ERVK-7P63135 1459 aa32.61■■■□□ 2.81
PHTF1-212ENST00000493212 ANKLE2Q86XL3 938 aa32.61■■■□□ 2.81
PHTF1-212ENST00000493212 PTPN23Q9H3S7 1636 aa32.61■■■□□ 2.81
PHTF1-212ENST00000493212 DISP3Q9P2K9 1392 aa32.6■■■□□ 2.81
PHTF1-212ENST00000493212 UBAP1LF5GYI3 381 aa32.59■■■□□ 2.81
PHTF1-212ENST00000493212 CEP152O94986 1710 aa32.59■■■□□ 2.81
PHTF1-212ENST00000493212 CPS1P31327 1500 aa32.58■■■□□ 2.81
PHTF1-212ENST00000493212 VWDEQ8N2E2 1590 aa32.57■■■□□ 2.8
PHTF1-212ENST00000493212 KIF15Q9NS87 1388 aa32.57■■■□□ 2.8
PHTF1-212ENST00000493212 PRDM15P57071 1507 aaPredicted RBP32.56■■■□□ 2.8
PHTF1-212ENST00000493212 NPHP4O75161 1426 aaPredicted RBP32.55■■■□□ 2.8
PHTF1-212ENST00000493212 ERBINQ96RT1 1412 aa32.55■■■□□ 2.8
PHTF1-212ENST00000493212 DAPK1P53355 1430 aa32.53■■■□□ 2.8
PHTF1-212ENST00000493212 FGD6Q6ZV73 1430 aa32.53■■■□□ 2.8
PHTF1-212ENST00000493212 ARHGAP31Q2M1Z3 1444 aa32.51■■■□□ 2.8
PHTF1-212ENST00000493212 APLP2Q06481 763 aa32.51■■■□□ 2.79
PHTF1-212ENST00000493212 ILDR2Q71H61 639 aa32.51■■■□□ 2.79
PHTF1-212ENST00000493212 IQGAP1P46940 1657 aa32.5■■■□□ 2.79
PHTF1-212ENST00000493212 RRP7BPQ9NSQ0 103 aa32.48■■■□□ 2.79
PHTF1-212ENST00000493212 UBR1Q8IWV7 1749 aa32.47■■■□□ 2.79
PHTF1-212ENST00000493212 CFAP65Q6ZU64 1925 aaKnown RBP32.43■■■□□ 2.78
PHTF1-212ENST00000493212 ARHGAP23Q9P227 1491 aa32.4■■■□□ 2.78
PHTF1-212ENST00000493212 SLIT1O75093 1534 aa32.39■■■□□ 2.78
PHTF1-212ENST00000493212 STRCP1A6NGW2 1772 aa32.38■■■□□ 2.77
PHTF1-212ENST00000493212 ALKQ9UM73 1620 aa32.37■■■□□ 2.77
PHTF1-212ENST00000493212 LMTK2Q8IWU2 1503 aa32.37■■■□□ 2.77
PHTF1-212ENST00000493212 ANKRD30AQ9BXX3 1397 aa32.37■■■□□ 2.77
PHTF1-212ENST00000493212 SCAF11Q99590 1463 aaKnown RBP32.36■■■□□ 2.77
PHTF1-212ENST00000493212 TOM1O60784 492 aa32.36■■■□□ 2.77
PHTF1-212ENST00000493212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.34■■■□□ 2.77
PHTF1-212ENST00000493212 CHIC2Q9UKJ5 165 aa32.33■■■□□ 2.77
PHTF1-212ENST00000493212 ADGRL2O95490 1459 aa32.33■■■□□ 2.77
PHTF1-212ENST00000493212 KANK1Q14678 1352 aa32.32■■■□□ 2.77
PHTF1-212ENST00000493212 LTKP29376 864 aa32.32■■■□□ 2.76
PHTF1-212ENST00000493212 LRRC7Q96NW7 1537 aa32.31■■■□□ 2.76
PHTF1-212ENST00000493212 PIK3C2BO00750 1634 aa32.31■■■□□ 2.76
PHTF1-212ENST00000493212 SYNMO15061 1565 aa32.3■■■□□ 2.76
PHTF1-212ENST00000493212 SOCS7O14512 581 aa32.29■■■□□ 2.76
PHTF1-212ENST00000493212 HSPA1LP34931 641 aa32.29■■■□□ 2.76
PHTF1-212ENST00000493212 PIP4K2BP78356 416 aa32.29■■■□□ 2.76
PHTF1-212ENST00000493212 KDM5AP29375 1690 aaKnown RBP32.27■■■□□ 2.76
PHTF1-212ENST00000493212 TXNDC2Q86VQ3 553 aa32.26■■■□□ 2.75
PHTF1-212ENST00000493212 SCAF1Q9H7N4 1312 aaKnown RBP32.26■■■□□ 2.75
PHTF1-212ENST00000493212 TMEM2Q9UHN6 1383 aa32.24■■■□□ 2.75
PHTF1-212ENST00000493212 EFCAB6Q5THR3 1501 aa32.24■■■□□ 2.75
PHTF1-212ENST00000493212 NOS1P29475 1434 aa32.23■■■□□ 2.75
PHTF1-212ENST00000493212 IDI1Q13907 227 aa32.2■■■□□ 2.75
PHTF1-212ENST00000493212 EID1Q9Y6B2 187 aa32.19■■■□□ 2.74
PHTF1-212ENST00000493212 FAM50AQ14320 339 aaKnown RBP32.16■■■□□ 2.74
PHTF1-212ENST00000493212 ANKRD50Q9ULJ7 1429 aa32.16■■■□□ 2.74
PHTF1-212ENST00000493212 MED1Q15648 1581 aaPredicted RBP32.15■■■□□ 2.74
PHTF1-212ENST00000493212 XIRP1Q702N8 1843 aaKnown RBP32.12■■■□□ 2.73
PHTF1-212ENST00000493212 ADGRB3O60242 1522 aa32.12■■■□□ 2.73
PHTF1-212ENST00000493212 RPRD2Q5VT52 1461 aaKnown RBP32.12■■■□□ 2.73
PHTF1-212ENST00000493212 STAG3Q9UJ98 1225 aa32.12■■■□□ 2.73
PHTF1-212ENST00000493212 TET3O43151 1660 aa32.11■■■□□ 2.73
PHTF1-212ENST00000493212 SLC52A1Q9NWF4 448 aa32.08■■■□□ 2.73
PHTF1-212ENST00000493212 UNC13BO14795 1591 aa32.04■■■□□ 2.72
PHTF1-212ENST00000493212 ROCK1Q13464 1354 aa32■■■□□ 2.71
PHTF1-212ENST00000493212 GCC2Q8IWJ2 1684 aa31.99■■■□□ 2.71
PHTF1-212ENST00000493212 KCNA6P17658 529 aa31.99■■■□□ 2.71
PHTF1-212ENST00000493212 ZFYVE9O95405 1425 aa31.99■■■□□ 2.71
PHTF1-212ENST00000493212 SLC26A8Q96RN1 970 aa31.98■■■□□ 2.71
PHTF1-212ENST00000493212 NWD1Q149M9 1564 aa31.97■■■□□ 2.71
PHTF1-212ENST00000493212 TMEM94Q12767 1356 aa31.96■■■□□ 2.71
PHTF1-212ENST00000493212 TMEM131LA2VDJ0 1609 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms