RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 DUOX2Q9NRD8 1548 aa20.99■□□□□ 0.95
IRF1-210ENST00000493208 EIF2AK4Q9P2K8 1649 aaKnown RBP20.98■□□□□ 0.95
IRF1-210ENST00000493208 PTPRTO14522 1441 aa20.97■□□□□ 0.95
IRF1-210ENST00000493208 PKD2Q13563 968 aa20.97■□□□□ 0.95
IRF1-210ENST00000493208 ANKRD30AQ9BXX3 1397 aa20.96■□□□□ 0.95
IRF1-210ENST00000493208 KIF15Q9NS87 1388 aa20.96■□□□□ 0.95
IRF1-210ENST00000493208 PZPP20742 1482 aa20.95■□□□□ 0.94
IRF1-210ENST00000493208 ERBINQ96RT1 1412 aa20.95■□□□□ 0.94
IRF1-210ENST00000493208 TCOF1Q13428 1488 aaKnown RBP20.94■□□□□ 0.94
IRF1-210ENST00000493208 KANK1Q14678 1352 aa20.94■□□□□ 0.94
IRF1-210ENST00000493208 DAPK1P53355 1430 aa20.94■□□□□ 0.94
IRF1-210ENST00000493208 NCOA1Q15788 1441 aa20.94■□□□□ 0.94
IRF1-210ENST00000493208 TNRQ92752 1358 aa20.93■□□□□ 0.94
IRF1-210ENST00000493208 MYO3AQ8NEV4 1616 aa20.93■□□□□ 0.94
IRF1-210ENST00000493208 ZC3H13Q5T200 1668 aaKnown RBP20.93■□□□□ 0.94
IRF1-210ENST00000493208 ABCC5O15440 1437 aa20.92■□□□□ 0.94
IRF1-210ENST00000493208 PLA2R1Q13018 1463 aa20.92■□□□□ 0.94
IRF1-210ENST00000493208 CEP170BQ9Y4F5 1589 aaPredicted RBP20.92■□□□□ 0.94
IRF1-210ENST00000493208 ZNF142P52746 1687 aaPredicted RBP20.91■□□□□ 0.94
IRF1-210ENST00000493208 FAM50AQ14320 339 aaKnown RBP20.91■□□□□ 0.94
IRF1-210ENST00000493208 CAMSAP1Q5T5Y3 1602 aa20.91■□□□□ 0.94
IRF1-210ENST00000493208 CERKQ8TCT0 537 aa20.91■□□□□ 0.94
IRF1-210ENST00000493208 RNF17Q9BXT8 1623 aaKnown RBP20.91■□□□□ 0.94
IRF1-210ENST00000493208 DNMT1P26358 1616 aaKnown RBP20.9■□□□□ 0.94
IRF1-210ENST00000493208 A2ML1A8K2U0 1454 aa20.9■□□□□ 0.94
IRF1-210ENST00000493208 RRP7BPQ9NSQ0 103 aa20.9■□□□□ 0.94
IRF1-210ENST00000493208 CROCC2H7BZ55 1655 aa20.89■□□□□ 0.93
IRF1-210ENST00000493208 NLRP1Q9C000 1473 aa20.88■□□□□ 0.93
IRF1-210ENST00000493208 THEMISQ8N1K5 641 aaPredicted RBP20.88■□□□□ 0.93
IRF1-210ENST00000493208 STRCQ7RTU9 1775 aa20.86■□□□□ 0.93
IRF1-210ENST00000493208 ABCC3O15438 1527 aa20.85■□□□□ 0.93
IRF1-210ENST00000493208 FBXO31Q5XUX0 539 aaPredicted RBP20.83■□□□□ 0.93
IRF1-210ENST00000493208 CHIC2Q9UKJ5 165 aa20.83■□□□□ 0.93
IRF1-210ENST00000493208 ANKLE2Q86XL3 938 aa20.82■□□□□ 0.92
IRF1-210ENST00000493208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.81■□□□□ 0.92
IRF1-210ENST00000493208 NCKAP5LQ9HCH0 1330 aa20.8■□□□□ 0.92
IRF1-210ENST00000493208 PRDM15P57071 1507 aaPredicted RBP20.8■□□□□ 0.92
IRF1-210ENST00000493208 ADGRL2O95490 1459 aa20.79■□□□□ 0.92
IRF1-210ENST00000493208 UGGT1Q9NYU2 1555 aa20.79■□□□□ 0.92
IRF1-210ENST00000493208 ARHGAP31Q2M1Z3 1444 aa20.78■□□□□ 0.92
IRF1-210ENST00000493208 SPATA31D1Q6ZQQ2 1576 aa20.77■□□□□ 0.92
IRF1-210ENST00000493208 IQSEC2Q5JU85 1478 aa20.77■□□□□ 0.92
IRF1-210ENST00000493208 ERVK-7P63135 1459 aa20.76■□□□□ 0.91
IRF1-210ENST00000493208 STAG3Q9UJ98 1225 aa20.74■□□□□ 0.91
IRF1-210ENST00000493208 ANKRD50Q9ULJ7 1429 aa20.74■□□□□ 0.91
IRF1-210ENST00000493208 MROH1Q8NDA8 1641 aa20.74■□□□□ 0.91
IRF1-210ENST00000493208 DEPDC5O75140 1603 aa20.73■□□□□ 0.91
IRF1-210ENST00000493208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.72■□□□□ 0.91
IRF1-210ENST00000493208 ROCK1Q13464 1354 aa20.71■□□□□ 0.91
IRF1-210ENST00000493208 CEP152O94986 1710 aa20.7■□□□□ 0.9
IRF1-210ENST00000493208 LMTK2Q8IWU2 1503 aa20.7■□□□□ 0.9
IRF1-210ENST00000493208 EID1Q9Y6B2 187 aa20.7■□□□□ 0.9
IRF1-210ENST00000493208 POLR1AO95602 1720 aaPredicted RBP20.68■□□□□ 0.9
IRF1-210ENST00000493208 ZNF335Q9H4Z2 1342 aaPredicted RBP20.66■□□□□ 0.9
IRF1-210ENST00000493208 NPHP4O75161 1426 aaPredicted RBP20.66■□□□□ 0.9
IRF1-210ENST00000493208 LTBP4Q8N2S1 1624 aa20.65■□□□□ 0.9
IRF1-210ENST00000493208 RPRD2Q5VT52 1461 aaKnown RBP20.65■□□□□ 0.9
IRF1-210ENST00000493208 SLC52A1Q9NWF4 448 aa20.65■□□□□ 0.9
IRF1-210ENST00000493208 MED14O60244 1454 aa20.64■□□□□ 0.89
IRF1-210ENST00000493208 CPS1P31327 1500 aa20.63■□□□□ 0.89
IRF1-210ENST00000493208 ITGAEP38570 1179 aa20.63■□□□□ 0.89
IRF1-210ENST00000493208 VWDEQ8N2E2 1590 aa20.63■□□□□ 0.89
IRF1-210ENST00000493208 HDGFP51858 240 aaKnown RBP20.62■□□□□ 0.89
IRF1-210ENST00000493208 EFCAB6Q5THR3 1501 aa20.62■□□□□ 0.89
IRF1-210ENST00000493208 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
IRF1-210ENST00000493208 SCAF11Q99590 1463 aaKnown RBP20.6■□□□□ 0.89
IRF1-210ENST00000493208 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
IRF1-210ENST00000493208 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.89
IRF1-210ENST00000493208 UBAP1LF5GYI3 381 aa20.57■□□□□ 0.88
IRF1-210ENST00000493208 UBR1Q8IWV7 1749 aa20.57■□□□□ 0.88
IRF1-210ENST00000493208 KDM5AP29375 1690 aaKnown RBP20.57■□□□□ 0.88
IRF1-210ENST00000493208 IQGAP1P46940 1657 aa20.57■□□□□ 0.88
IRF1-210ENST00000493208 SLIT1O75093 1534 aa20.57■□□□□ 0.88
IRF1-210ENST00000493208 TOM1O60784 492 aa20.56■□□□□ 0.88
IRF1-210ENST00000493208 NOS1P29475 1434 aa20.55■□□□□ 0.88
IRF1-210ENST00000493208 TMEM2Q9UHN6 1383 aa20.55■□□□□ 0.88
IRF1-210ENST00000493208 UNC13BO14795 1591 aa20.55■□□□□ 0.88
IRF1-210ENST00000493208 TET3O43151 1660 aa20.54■□□□□ 0.88
IRF1-210ENST00000493208 IDI1Q13907 227 aa20.54■□□□□ 0.88
IRF1-210ENST00000493208 CFAP65Q6ZU64 1925 aaKnown RBP20.54■□□□□ 0.88
IRF1-210ENST00000493208 RRBP1Q9P2E9 1410 aaKnown RBP20.53■□□□□ 0.88
IRF1-210ENST00000493208 NUP155O75694 1391 aa20.53■□□□□ 0.88
IRF1-210ENST00000493208 ARHGAP23Q9P227 1491 aa20.53■□□□□ 0.88
IRF1-210ENST00000493208 PIK3C2BO00750 1634 aa20.52■□□□□ 0.88
IRF1-210ENST00000493208 ADGRB3O60242 1522 aa20.5■□□□□ 0.87
IRF1-210ENST00000493208 BCANQ96GW7 911 aa20.5■□□□□ 0.87
IRF1-210ENST00000493208 GCC2Q8IWJ2 1684 aa20.5■□□□□ 0.87
IRF1-210ENST00000493208 PPP1R15AO75807 674 aaPredicted RBP20.49■□□□□ 0.87
IRF1-210ENST00000493208 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.49■□□□□ 0.87
IRF1-210ENST00000493208 IQGAP3Q86VI3 1631 aa20.47■□□□□ 0.87
IRF1-210ENST00000493208 LTKP29376 864 aa20.47■□□□□ 0.87
IRF1-210ENST00000493208 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
IRF1-210ENST00000493208 SYNMO15061 1565 aa20.46■□□□□ 0.87
IRF1-210ENST00000493208 CHGAP10645 457 aaKnown RBP20.45■□□□□ 0.86
IRF1-210ENST00000493208 ACIN1Q9UKV3 1341 aaKnown RBP20.44■□□□□ 0.86
IRF1-210ENST00000493208 PIP4K2BP78356 416 aa20.39■□□□□ 0.85
IRF1-210ENST00000493208 KCNA6P17658 529 aa20.38■□□□□ 0.85
IRF1-210ENST00000493208 RIMS2Q9UQ26 1411 aa20.37■□□□□ 0.85
IRF1-210ENST00000493208 PLEKHG1Q9ULL1 1385 aa20.37■□□□□ 0.85
IRF1-210ENST00000493208 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms