RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 RICTORQ6R327 1708 aa12.03□□□□□ -0.48
SPTA1-208ENST00000492934 FANCAO15360 1455 aa12.03□□□□□ -0.48
SPTA1-208ENST00000492934 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.48
SPTA1-208ENST00000492934 ZMYM4Q5VZL5 1548 aa12.01□□□□□ -0.49
SPTA1-208ENST00000492934 HECW1Q76N89 1606 aa12.01□□□□□ -0.49
SPTA1-208ENST00000492934 PLEKHD1A6NEE1 506 aa12□□□□□ -0.49
SPTA1-208ENST00000492934 PCDHB13Q9Y5F0 798 aa12□□□□□ -0.49
SPTA1-208ENST00000492934 ARID4BQ4LE39 1312 aaPredicted RBP12□□□□□ -0.49
SPTA1-208ENST00000492934 AKNAQ7Z591 1439 aa12□□□□□ -0.49
SPTA1-208ENST00000492934 ZFYVE16Q7Z3T8 1539 aa11.99□□□□□ -0.49
SPTA1-208ENST00000492934 RIMS1Q86UR5 1692 aaKnown RBP11.99□□□□□ -0.49
SPTA1-208ENST00000492934 PCF11O94913 1555 aaKnown RBP11.98□□□□□ -0.49
SPTA1-208ENST00000492934 SLAIN1Q8ND83 568 aa11.98□□□□□ -0.49
SPTA1-208ENST00000492934 FBXO3Q9UK99 471 aa11.98□□□□□ -0.49
SPTA1-208ENST00000492934 FMN1Q68DA7 1419 aa11.97□□□□□ -0.49
SPTA1-208ENST00000492934 ARHGAP35Q9NRY4 1499 aa11.96□□□□□ -0.49
SPTA1-208ENST00000492934 POGZQ7Z3K3 1410 aa11.96□□□□□ -0.49
SPTA1-208ENST00000492934 KIF14Q15058 1648 aa11.96□□□□□ -0.5
SPTA1-208ENST00000492934 YEATS2Q9ULM3 1422 aa11.95□□□□□ -0.5
SPTA1-208ENST00000492934 SIGLEC1Q9BZZ2 1709 aa11.95□□□□□ -0.5
SPTA1-208ENST00000492934 ST18O60284 1047 aa11.95□□□□□ -0.5
SPTA1-208ENST00000492934 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
SPTA1-208ENST00000492934 MYO5CQ9NQX4 1742 aa11.94□□□□□ -0.5
SPTA1-208ENST00000492934 UBTFP17480 764 aaKnown RBP11.94□□□□□ -0.5
SPTA1-208ENST00000492934 MAGI2Q86UL8 1455 aa11.94□□□□□ -0.5
SPTA1-208ENST00000492934 PLCD3Q8N3E9 789 aa11.93□□□□□ -0.5
SPTA1-208ENST00000492934 PLCH2O75038 1416 aa11.93□□□□□ -0.5
SPTA1-208ENST00000492934 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
SPTA1-208ENST00000492934 ATP1B4Q9UN42 357 aaPredicted RBP11.92□□□□□ -0.5
SPTA1-208ENST00000492934 SCAPERQ9BY12 1400 aa11.92□□□□□ -0.5
SPTA1-208ENST00000492934 FER1L4A9Z1Z3 1794 aa11.91□□□□□ -0.5
SPTA1-208ENST00000492934 ARHGAP5Q13017 1502 aa11.91□□□□□ -0.5
SPTA1-208ENST00000492934 CLIP1P30622 1438 aa11.9□□□□□ -0.5
SPTA1-208ENST00000492934 TROQ12816 1431 aaPredicted RBP11.9□□□□□ -0.5
SPTA1-208ENST00000492934 IFNL1Q8IU54 200 aa11.9□□□□□ -0.5
SPTA1-208ENST00000492934 C9orf84Q5VXU9 1444 aa11.89□□□□□ -0.51
SPTA1-208ENST00000492934 PLCG2P16885 1265 aa11.89□□□□□ -0.51
SPTA1-208ENST00000492934 NUBP1P53384 320 aa11.89□□□□□ -0.51
SPTA1-208ENST00000492934 LRRIQ1Q96JM4 1722 aa11.89□□□□□ -0.51
SPTA1-208ENST00000492934 TMEM106CQ9BVX2 250 aa11.88□□□□□ -0.51
SPTA1-208ENST00000492934 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
SPTA1-208ENST00000492934 MLECQ14165 292 aa11.87□□□□□ -0.51
SPTA1-208ENST00000492934 CDK11AQ9UQ88 783 aaPredicted RBP11.87□□□□□ -0.51
SPTA1-208ENST00000492934 KDM5CP41229 1560 aa11.87□□□□□ -0.51
SPTA1-208ENST00000492934 ARHGEF12Q9NZN5 1544 aa11.86□□□□□ -0.51
SPTA1-208ENST00000492934 CCDC18Q5T9S5 1454 aa11.86□□□□□ -0.51
SPTA1-208ENST00000492934 PREX2Q70Z35 1606 aa11.86□□□□□ -0.51
SPTA1-208ENST00000492934 ATP10AO60312 1499 aa11.85□□□□□ -0.51
SPTA1-208ENST00000492934 EFCAB2Q5VUJ9 269 aa11.85□□□□□ -0.51
SPTA1-208ENST00000492934 DIP2CQ9Y2E4 1556 aa11.84□□□□□ -0.51
SPTA1-208ENST00000492934 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
SPTA1-208ENST00000492934 FBXO41Q8TF61 875 aa11.84□□□□□ -0.51
SPTA1-208ENST00000492934 ABCC1P33527 1531 aa11.84□□□□□ -0.51
SPTA1-208ENST00000492934 ABCA6Q8N139 1617 aa11.83□□□□□ -0.52
SPTA1-208ENST00000492934 HSPA2P54652 639 aa11.83□□□□□ -0.52
SPTA1-208ENST00000492934 FAM212AQ96EL1 285 aa11.83□□□□□ -0.52
SPTA1-208ENST00000492934 TMEM121BQ9BXQ6 578 aaPredicted RBP11.83□□□□□ -0.52
SPTA1-208ENST00000492934 CASKIN1Q8WXD9 1431 aa11.83□□□□□ -0.52
SPTA1-208ENST00000492934 PREX1Q8TCU6 1659 aa11.82□□□□□ -0.52
SPTA1-208ENST00000492934 CDC42BPBQ9Y5S2 1711 aa11.82□□□□□ -0.52
SPTA1-208ENST00000492934 FYCO1Q9BQS8 1478 aa11.82□□□□□ -0.52
SPTA1-208ENST00000492934 ITSN2Q9NZM3 1697 aa11.81□□□□□ -0.52
SPTA1-208ENST00000492934 REREQ9P2R6 1566 aa11.81□□□□□ -0.52
SPTA1-208ENST00000492934 MMRN1Q13201 1228 aa11.8□□□□□ -0.52
SPTA1-208ENST00000492934 SNPHO15079 494 aa11.79□□□□□ -0.52
SPTA1-208ENST00000492934 OCEL1Q9H607 264 aa11.79□□□□□ -0.52
SPTA1-208ENST00000492934 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
SPTA1-208ENST00000492934 MLH3Q9UHC1 1453 aa11.78□□□□□ -0.52
SPTA1-208ENST00000492934 CDC42BPAQ5VT25 1732 aa11.78□□□□□ -0.52
SPTA1-208ENST00000492934 SPNS2Q8IVW8 549 aa11.78□□□□□ -0.52
SPTA1-208ENST00000492934 AFAP1Q8N556 730 aa11.78□□□□□ -0.52
SPTA1-208ENST00000492934 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.52
SPTA1-208ENST00000492934 UHRF1BP1Q6BDS2 1440 aa11.77□□□□□ -0.53
SPTA1-208ENST00000492934 AGLP35573 1532 aa11.76□□□□□ -0.53
SPTA1-208ENST00000492934 SYCP2Q9BX26 1530 aa11.76□□□□□ -0.53
SPTA1-208ENST00000492934 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
SPTA1-208ENST00000492934 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
SPTA1-208ENST00000492934 C3P01024 1663 aa11.75□□□□□ -0.53
SPTA1-208ENST00000492934 KIDINS220Q9ULH0 1771 aa11.74□□□□□ -0.53
SPTA1-208ENST00000492934 CEBPAP49715 358 aaPredicted RBP11.74□□□□□ -0.53
SPTA1-208ENST00000492934 VASPP50552 380 aaPredicted RBP11.73□□□□□ -0.53
SPTA1-208ENST00000492934 INO80Q9ULG1 1556 aaPredicted RBP11.71□□□□□ -0.54
SPTA1-208ENST00000492934 ATP7AQ04656 1500 aa11.7□□□□□ -0.54
SPTA1-208ENST00000492934 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
SPTA1-208ENST00000492934 ESF1Q9H501 851 aaKnown RBP11.7□□□□□ -0.54
SPTA1-208ENST00000492934 ZNF777Q9ULD5 760 aaPredicted RBP11.7□□□□□ -0.54
SPTA1-208ENST00000492934 CNTLNQ9NXG0 1405 aa11.69□□□□□ -0.54
SPTA1-208ENST00000492934 STRCQ7RTU9 1775 aa11.69□□□□□ -0.54
SPTA1-208ENST00000492934 PLEKHH2Q8IVE3 1493 aa11.69□□□□□ -0.54
SPTA1-208ENST00000492934 MROH2AA6NES4 1674 aa11.68□□□□□ -0.54
SPTA1-208ENST00000492934 PLXNC1O60486 1568 aa11.68□□□□□ -0.54
SPTA1-208ENST00000492934 CERKQ8TCT0 537 aa11.68□□□□□ -0.54
SPTA1-208ENST00000492934 MARVELD3Q96A59 401 aa11.68□□□□□ -0.54
SPTA1-208ENST00000492934 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
SPTA1-208ENST00000492934 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
SPTA1-208ENST00000492934 TIAM1Q13009 1591 aa11.67□□□□□ -0.54
SPTA1-208ENST00000492934 SPAG9O60271 1321 aaKnown RBP11.67□□□□□ -0.54
SPTA1-208ENST00000492934 CCNB3Q8WWL7 1395 aa11.67□□□□□ -0.54
SPTA1-208ENST00000492934 SUPT6HQ7KZ85 1726 aaKnown RBP11.66□□□□□ -0.54
SPTA1-208ENST00000492934 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms