RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 APLP2Q06481 763 aa23.04■■□□□ 1.28
SS18L1-205ENST00000492466 FBXO31Q5XUX0 539 aaPredicted RBP23.03■■□□□ 1.28
SS18L1-205ENST00000492466 TSPY4P0CV99 314 aa23.02■■□□□ 1.28
SS18L1-205ENST00000492466 TSPY10P0CW01 314 aa23.02■■□□□ 1.28
SS18L1-205ENST00000492466 KDM5DQ9BY66 1539 aa23.02■■□□□ 1.28
SS18L1-205ENST00000492466 FAM135AQ9P2D6 1515 aa23.02■■□□□ 1.28
SS18L1-205ENST00000492466 PKD2Q13563 968 aa23.01■■□□□ 1.27
SS18L1-205ENST00000492466 A2ML1A8K2U0 1454 aa23■■□□□ 1.27
SS18L1-205ENST00000492466 PZPP20742 1482 aa23■■□□□ 1.27
SS18L1-205ENST00000492466 DNMT1P26358 1616 aaKnown RBP23■■□□□ 1.27
SS18L1-205ENST00000492466 MAST1Q9Y2H9 1570 aa22.99■■□□□ 1.27
SS18L1-205ENST00000492466 WASHC2CQ9Y4E1 1318 aa22.99■■□□□ 1.27
SS18L1-205ENST00000492466 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
SS18L1-205ENST00000492466 ZNF335Q9H4Z2 1342 aaPredicted RBP22.98■■□□□ 1.27
SS18L1-205ENST00000492466 MYOM3Q5VTT5 1437 aa22.98■■□□□ 1.27
SS18L1-205ENST00000492466 IQSEC2Q5JU85 1478 aa22.98■■□□□ 1.27
SS18L1-205ENST00000492466 TNRQ92752 1358 aa22.97■■□□□ 1.27
SS18L1-205ENST00000492466 RNF17Q9BXT8 1623 aaKnown RBP22.93■■□□□ 1.26
SS18L1-205ENST00000492466 MROH1Q8NDA8 1641 aa22.9■■□□□ 1.26
SS18L1-205ENST00000492466 NEURL4Q96JN8 1562 aa22.89■■□□□ 1.26
SS18L1-205ENST00000492466 ABCC3O15438 1527 aa22.89■■□□□ 1.26
SS18L1-205ENST00000492466 EIF2AK4Q9P2K8 1649 aaKnown RBP22.88■■□□□ 1.25
SS18L1-205ENST00000492466 NLRP1Q9C000 1473 aa22.87■■□□□ 1.25
SS18L1-205ENST00000492466 ABCC5O15440 1437 aa22.86■■□□□ 1.25
SS18L1-205ENST00000492466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.85■■□□□ 1.256e-8■■■■□ 21.9
SS18L1-205ENST00000492466 POLR1AO95602 1720 aaPredicted RBP22.85■■□□□ 1.25
SS18L1-205ENST00000492466 SPATA31D1Q6ZQQ2 1576 aa22.84■■□□□ 1.25
SS18L1-205ENST00000492466 ZC3H13Q5T200 1668 aaKnown RBP22.84■■□□□ 1.25
SS18L1-205ENST00000492466 DUOX2Q9NRD8 1548 aa22.83■■□□□ 1.25
SS18L1-205ENST00000492466 THEMISQ8N1K5 641 aaPredicted RBP22.83■■□□□ 1.25
SS18L1-205ENST00000492466 UGGT1Q9NYU2 1555 aa22.83■■□□□ 1.25
SS18L1-205ENST00000492466 PTPN23Q9H3S7 1636 aa22.82■■□□□ 1.24
SS18L1-205ENST00000492466 SHANK2Q9UPX8 1470 aa22.81■■□□□ 1.24
SS18L1-205ENST00000492466 ANKLE2Q86XL3 938 aa22.81■■□□□ 1.24
SS18L1-205ENST00000492466 ERVK-7P63135 1459 aa22.8■■□□□ 1.24
SS18L1-205ENST00000492466 CROCC2H7BZ55 1655 aa22.8■■□□□ 1.24
SS18L1-205ENST00000492466 MED14O60244 1454 aa22.79■■□□□ 1.24
SS18L1-205ENST00000492466 KIF15Q9NS87 1388 aa22.79■■□□□ 1.24
SS18L1-205ENST00000492466 UBAP1LF5GYI3 381 aa22.78■■□□□ 1.24
SS18L1-205ENST00000492466 CEP152O94986 1710 aa22.78■■□□□ 1.24
SS18L1-205ENST00000492466 FGD6Q6ZV73 1430 aa22.78■■□□□ 1.24
SS18L1-205ENST00000492466 DAPK1P53355 1430 aa22.77■■□□□ 1.24
SS18L1-205ENST00000492466 RRP7BPQ9NSQ0 103 aa22.77■■□□□ 1.24
SS18L1-205ENST00000492466 DEPDC5O75140 1603 aa22.77■■□□□ 1.24
SS18L1-205ENST00000492466 ERBINQ96RT1 1412 aa22.76■■□□□ 1.23
SS18L1-205ENST00000492466 PRDM15P57071 1507 aaPredicted RBP22.76■■□□□ 1.23
SS18L1-205ENST00000492466 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
SS18L1-205ENST00000492466 NPHP4O75161 1426 aaPredicted RBP22.74■■□□□ 1.23
SS18L1-205ENST00000492466 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
SS18L1-205ENST00000492466 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
SS18L1-205ENST00000492466 CFAP65Q6ZU64 1925 aaKnown RBP22.73■■□□□ 1.23
SS18L1-205ENST00000492466 CPS1P31327 1500 aa22.72■■□□□ 1.23
SS18L1-205ENST00000492466 ILDR2Q71H61 639 aa22.72■■□□□ 1.23
SS18L1-205ENST00000492466 UBR1Q8IWV7 1749 aa22.69■■□□□ 1.22
SS18L1-205ENST00000492466 IQGAP1P46940 1657 aa22.68■■□□□ 1.22
SS18L1-205ENST00000492466 CHIC2Q9UKJ5 165 aa22.68■■□□□ 1.22
SS18L1-205ENST00000492466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.66■■□□□ 1.222e-8■■□□□ 12.3
SS18L1-205ENST00000492466 ANKRD30AQ9BXX3 1397 aa22.65■■□□□ 1.22
SS18L1-205ENST00000492466 STRCP1A6NGW2 1772 aa22.65■■□□□ 1.22
SS18L1-205ENST00000492466 ARHGAP23Q9P227 1491 aa22.65■■□□□ 1.22
SS18L1-205ENST00000492466 LTKP29376 864 aa22.64■■□□□ 1.21
SS18L1-205ENST00000492466 ALKQ9UM73 1620 aa22.64■■□□□ 1.21
SS18L1-205ENST00000492466 SLIT1O75093 1534 aa22.63■■□□□ 1.21
SS18L1-205ENST00000492466 LMTK2Q8IWU2 1503 aa22.63■■□□□ 1.21
SS18L1-205ENST00000492466 ADGRL2O95490 1459 aa22.62■■□□□ 1.21
SS18L1-205ENST00000492466 SCAF11Q99590 1463 aaKnown RBP22.61■■□□□ 1.21
SS18L1-205ENST00000492466 TOM1O60784 492 aa22.61■■□□□ 1.21
SS18L1-205ENST00000492466 KANK1Q14678 1352 aa22.6■■□□□ 1.21
SS18L1-205ENST00000492466 LRRC7Q96NW7 1537 aa22.59■■□□□ 1.21
SS18L1-205ENST00000492466 TXNDC2Q86VQ3 553 aa22.59■■□□□ 1.21
SS18L1-205ENST00000492466 PIK3C2BO00750 1634 aa22.59■■□□□ 1.21
SS18L1-205ENST00000492466 HSPA1LP34931 641 aa22.58■■□□□ 1.21
SS18L1-205ENST00000492466 PIP4K2BP78356 416 aa22.58■■□□□ 1.21
SS18L1-205ENST00000492466 IDI1Q13907 227 aa22.57■■□□□ 1.2
SS18L1-205ENST00000492466 TMEM2Q9UHN6 1383 aa22.56■■□□□ 1.2
SS18L1-205ENST00000492466 PPARGC1BQ86YN6 1023 aaKnown RBP22.56■■□□□ 1.2
SS18L1-205ENST00000492466 NOS1P29475 1434 aa22.56■■□□□ 1.2
SS18L1-205ENST00000492466 SYNMO15061 1565 aa22.55■■□□□ 1.2
SS18L1-205ENST00000492466 FAM50AQ14320 339 aaKnown RBP22.55■■□□□ 1.2
SS18L1-205ENST00000492466 EFCAB6Q5THR3 1501 aa22.53■■□□□ 1.2
SS18L1-205ENST00000492466 KDM5AP29375 1690 aaKnown RBP22.53■■□□□ 1.2
SS18L1-205ENST00000492466 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
SS18L1-205ENST00000492466 ANKRD50Q9ULJ7 1429 aa22.52■■□□□ 1.2
SS18L1-205ENST00000492466 SOCS7O14512 581 aa22.52■■□□□ 1.2
SS18L1-205ENST00000492466 EID1Q9Y6B2 187 aa22.5■■□□□ 1.19
SS18L1-205ENST00000492466 STAG3Q9UJ98 1225 aa22.47■■□□□ 1.19
SS18L1-205ENST00000492466 TET3O43151 1660 aa22.46■■□□□ 1.19
SS18L1-205ENST00000492466 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.19
SS18L1-205ENST00000492466 SLC52A1Q9NWF4 448 aa22.45■■□□□ 1.18
SS18L1-205ENST00000492466 RPRD2Q5VT52 1461 aaKnown RBP22.45■■□□□ 1.18
SS18L1-205ENST00000492466 ADGRB3O60242 1522 aa22.44■■□□□ 1.18
SS18L1-205ENST00000492466 MED1Q15648 1581 aaPredicted RBP22.42■■□□□ 1.18
SS18L1-205ENST00000492466 ROCK1Q13464 1354 aa22.4■■□□□ 1.18
SS18L1-205ENST00000492466 SLC26A8Q96RN1 970 aa22.4■■□□□ 1.18
SS18L1-205ENST00000492466 UNC13BO14795 1591 aa22.4■■□□□ 1.18
SS18L1-205ENST00000492466 KCNA6P17658 529 aa22.38■■□□□ 1.17
SS18L1-205ENST00000492466 ZFYVE9O95405 1425 aa22.38■■□□□ 1.17
SS18L1-205ENST00000492466 TMEM94Q12767 1356 aa22.36■■□□□ 1.17
SS18L1-205ENST00000492466 TMEM131LA2VDJ0 1609 aa22.35■■□□□ 1.17
SS18L1-205ENST00000492466 MYO5BQ9ULV0 1848 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms