RNA–Protein interactions for RNA: ENST00000491815.1

PRDM2-210, Transcript of PR/SET domain 2, humanhuman

TSL 2

Gene PRDM2, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-210ENST00000491815 RTEL1-TNFRSF6BF6WH68 1400 aa18.22■□□□□ 0.51
PRDM2-210ENST00000491815 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
PRDM2-210ENST00000491815 CCDC141Q6ZP82 1450 aa18.21■□□□□ 0.51
PRDM2-210ENST00000491815 MKRN4PQ13434 485 aaPredicted RBP18.21■□□□□ 0.51
PRDM2-210ENST00000491815 RSPH4AQ5TD94 716 aa18.2■□□□□ 0.5
PRDM2-210ENST00000491815 MYT1LQ9UL68 1186 aa18.19■□□□□ 0.5
PRDM2-210ENST00000491815 MAST1Q9Y2H9 1570 aa18.17■□□□□ 0.5
PRDM2-210ENST00000491815 A2MP01023 1474 aa18.16■□□□□ 0.5
PRDM2-210ENST00000491815 PTPN23Q9H3S7 1636 aa18.13■□□□□ 0.49
PRDM2-210ENST00000491815 MLECQ14165 292 aa18.12■□□□□ 0.49
PRDM2-210ENST00000491815 MROH2AA6NES4 1674 aa18.12■□□□□ 0.49
PRDM2-210ENST00000491815 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
PRDM2-210ENST00000491815 TCOF1Q13428 1488 aaKnown RBP18.11■□□□□ 0.49
PRDM2-210ENST00000491815 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
PRDM2-210ENST00000491815 FGD6Q6ZV73 1430 aa18.1■□□□□ 0.49
PRDM2-210ENST00000491815 C3P01024 1663 aa18.09■□□□□ 0.49
PRDM2-210ENST00000491815 CNTLNQ9NXG0 1405 aa18.09■□□□□ 0.49
PRDM2-210ENST00000491815 DHX29Q7Z478 1369 aaKnown RBP18.08■□□□□ 0.49
PRDM2-210ENST00000491815 SHANK2Q9UPX8 1470 aa18.07■□□□□ 0.48
PRDM2-210ENST00000491815 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
PRDM2-210ENST00000491815 LMTK3Q96Q04 1460 aa18.07■□□□□ 0.48
PRDM2-210ENST00000491815 SPDYE4A6NLX3 237 aa18.06■□□□□ 0.48
PRDM2-210ENST00000491815 ABCB7O75027 752 aa18.06■□□□□ 0.48
PRDM2-210ENST00000491815 FAM135AQ9P2D6 1515 aa18.06■□□□□ 0.48
PRDM2-210ENST00000491815 PREX1Q8TCU6 1659 aa18.06■□□□□ 0.48
PRDM2-210ENST00000491815 TSPY4P0CV99 314 aa18.05■□□□□ 0.48
PRDM2-210ENST00000491815 TSPY10P0CW01 314 aa18.05■□□□□ 0.48
PRDM2-210ENST00000491815 EIF2AK4Q9P2K8 1649 aaKnown RBP18.04■□□□□ 0.48
PRDM2-210ENST00000491815 CLTCQ00610 1675 aaKnown RBP18.03■□□□□ 0.48
PRDM2-210ENST00000491815 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
PRDM2-210ENST00000491815 ABCC5O15440 1437 aa18.02■□□□□ 0.48
PRDM2-210ENST00000491815 RNF17Q9BXT8 1623 aaKnown RBP18.01■□□□□ 0.47
PRDM2-210ENST00000491815 DAPK1P53355 1430 aa18.01■□□□□ 0.47
PRDM2-210ENST00000491815 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
PRDM2-210ENST00000491815 DUOX2Q9NRD8 1548 aa17.98■□□□□ 0.47
PRDM2-210ENST00000491815 NPATQ14207 1427 aa17.98■□□□□ 0.47
PRDM2-210ENST00000491815 CEBPAP49715 358 aaPredicted RBP17.97■□□□□ 0.47
PRDM2-210ENST00000491815 DSG3P32926 999 aa17.96■□□□□ 0.47
PRDM2-210ENST00000491815 KDM5DQ9BY66 1539 aa17.96■□□□□ 0.47
PRDM2-210ENST00000491815 ZC3H13Q5T200 1668 aaKnown RBP17.96■□□□□ 0.47
PRDM2-210ENST00000491815 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
PRDM2-210ENST00000491815 GGT6Q6P531 493 aa17.95■□□□□ 0.46
PRDM2-210ENST00000491815 MROH1Q8NDA8 1641 aa17.94■□□□□ 0.46
PRDM2-210ENST00000491815 KIF3BO15066 747 aa17.94■□□□□ 0.46
PRDM2-210ENST00000491815 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
PRDM2-210ENST00000491815 ERBINQ96RT1 1412 aa17.94■□□□□ 0.46
PRDM2-210ENST00000491815 ADGRL2O95490 1459 aa17.94■□□□□ 0.46
PRDM2-210ENST00000491815 UHRF1BP1Q6BDS2 1440 aa17.93■□□□□ 0.46
PRDM2-210ENST00000491815 KIF15Q9NS87 1388 aa17.92■□□□□ 0.46
PRDM2-210ENST00000491815 DEPDC5O75140 1603 aa17.91■□□□□ 0.46
PRDM2-210ENST00000491815 ZNF142P52746 1687 aaPredicted RBP17.91■□□□□ 0.46
PRDM2-210ENST00000491815 PTPRKQ15262 1439 aa17.9■□□□□ 0.46
PRDM2-210ENST00000491815 PRDM15P57071 1507 aaPredicted RBP17.9■□□□□ 0.46
PRDM2-210ENST00000491815 ANKRD30AQ9BXX3 1397 aa17.9■□□□□ 0.46
PRDM2-210ENST00000491815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.9■□□□□ 0.46
PRDM2-210ENST00000491815 NCOA1Q15788 1441 aa17.89■□□□□ 0.46
PRDM2-210ENST00000491815 PROM2Q8N271 834 aa17.89■□□□□ 0.45
PRDM2-210ENST00000491815 MYO3AQ8NEV4 1616 aa17.89■□□□□ 0.45
PRDM2-210ENST00000491815 PZPP20742 1482 aa17.88■□□□□ 0.45
PRDM2-210ENST00000491815 ABCC3O15438 1527 aa17.88■□□□□ 0.45
PRDM2-210ENST00000491815 RTN4Q9NQC3 1192 aaKnown RBP17.87■□□□□ 0.45
PRDM2-210ENST00000491815 CEP152O94986 1710 aa17.86■□□□□ 0.45
PRDM2-210ENST00000491815 STRCQ7RTU9 1775 aa17.86■□□□□ 0.45
PRDM2-210ENST00000491815 HSPA2P54652 639 aa17.85■□□□□ 0.45
PRDM2-210ENST00000491815 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
PRDM2-210ENST00000491815 CAMSAP1Q5T5Y3 1602 aa17.84■□□□□ 0.45
PRDM2-210ENST00000491815 WASHC2CQ9Y4E1 1318 aa17.84■□□□□ 0.45
PRDM2-210ENST00000491815 CEP170BQ9Y4F5 1589 aaPredicted RBP17.83■□□□□ 0.45
PRDM2-210ENST00000491815 RRP7BPQ9NSQ0 103 aa17.83■□□□□ 0.44
PRDM2-210ENST00000491815 VWDEQ8N2E2 1590 aa17.83■□□□□ 0.44
PRDM2-210ENST00000491815 RRBP1Q9P2E9 1410 aaKnown RBP17.82■□□□□ 0.44
PRDM2-210ENST00000491815 FBXO3Q9UK99 471 aa17.82■□□□□ 0.44
PRDM2-210ENST00000491815 ROCK1Q13464 1354 aa17.81■□□□□ 0.44
PRDM2-210ENST00000491815 SPATA31D1Q6ZQQ2 1576 aa17.81■□□□□ 0.44
PRDM2-210ENST00000491815 FBXO41Q8TF61 875 aa17.8■□□□□ 0.44
PRDM2-210ENST00000491815 CHIC2Q9UKJ5 165 aa17.8■□□□□ 0.44
PRDM2-210ENST00000491815 LMTK2Q8IWU2 1503 aa17.8■□□□□ 0.44
PRDM2-210ENST00000491815 A2ML1A8K2U0 1454 aa17.79■□□□□ 0.44
PRDM2-210ENST00000491815 ARHGAP31Q2M1Z3 1444 aa17.79■□□□□ 0.44
PRDM2-210ENST00000491815 ANKRD50Q9ULJ7 1429 aa17.78■□□□□ 0.44
PRDM2-210ENST00000491815 PLA2R1Q13018 1463 aa17.77■□□□□ 0.44
PRDM2-210ENST00000491815 CACNB1Q02641 598 aaPredicted RBP17.77■□□□□ 0.44
PRDM2-210ENST00000491815 TNRQ92752 1358 aa17.77■□□□□ 0.43
PRDM2-210ENST00000491815 ERVK-7P63135 1459 aa17.76■□□□□ 0.43
PRDM2-210ENST00000491815 NLRP1Q9C000 1473 aa17.76■□□□□ 0.43
PRDM2-210ENST00000491815 UNC13BO14795 1591 aa17.76■□□□□ 0.43
PRDM2-210ENST00000491815 PPARGC1BQ86YN6 1023 aaKnown RBP17.76■□□□□ 0.43
PRDM2-210ENST00000491815 CFAP65Q6ZU64 1925 aaKnown RBP17.75■□□□□ 0.43
PRDM2-210ENST00000491815 FBXO31Q5XUX0 539 aaPredicted RBP17.74■□□□□ 0.43
PRDM2-210ENST00000491815 KANK1Q14678 1352 aa17.74■□□□□ 0.43
PRDM2-210ENST00000491815 PTPRTO14522 1441 aa17.73■□□□□ 0.43
PRDM2-210ENST00000491815 EFCAB6Q5THR3 1501 aa17.72■□□□□ 0.43
PRDM2-210ENST00000491815 POLR1AO95602 1720 aaPredicted RBP17.71■□□□□ 0.43
PRDM2-210ENST00000491815 TET3O43151 1660 aa17.71■□□□□ 0.42
PRDM2-210ENST00000491815 GCC2Q8IWJ2 1684 aa17.71■□□□□ 0.42
PRDM2-210ENST00000491815 UGGT1Q9NYU2 1555 aa17.69■□□□□ 0.42
PRDM2-210ENST00000491815 IQGAP3Q86VI3 1631 aa17.68■□□□□ 0.42
PRDM2-210ENST00000491815 RPRD2Q5VT52 1461 aaKnown RBP17.68■□□□□ 0.42
PRDM2-210ENST00000491815 UBR1Q8IWV7 1749 aa17.67■□□□□ 0.42
PRDM2-210ENST00000491815 PKD2Q13563 968 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms