RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CDC42BPAQ5VT25 1732 aa11.8□□□□□ -0.52
CLDN1-202ENST00000490800 FER1L4A9Z1Z3 1794 aa11.78□□□□□ -0.52
CLDN1-202ENST00000490800 SAMD9LQ8IVG5 1584 aa11.78□□□□□ -0.52
CLDN1-202ENST00000490800 ABCA6Q8N139 1617 aa11.78□□□□□ -0.52
CLDN1-202ENST00000490800 VPS8Q8N3P4 1428 aa11.77□□□□□ -0.52
CLDN1-202ENST00000490800 KIAA1107Q9UPP5 1409 aa11.77□□□□□ -0.52
CLDN1-202ENST00000490800 MIER1Q8N108 512 aa11.77□□□□□ -0.53
CLDN1-202ENST00000490800 ITSN2Q9NZM3 1697 aa11.77□□□□□ -0.53
CLDN1-202ENST00000490800 SYCP2Q9BX26 1530 aa11.76□□□□□ -0.53
CLDN1-202ENST00000490800 REREQ9P2R6 1566 aa11.76□□□□□ -0.53
CLDN1-202ENST00000490800 AGLP35573 1532 aa11.76□□□□□ -0.53
CLDN1-202ENST00000490800 KIDINS220Q9ULH0 1771 aa11.75□□□□□ -0.53
CLDN1-202ENST00000490800 FBXO41Q8TF61 875 aa11.75□□□□□ -0.53
CLDN1-202ENST00000490800 PLEKHH2Q8IVE3 1493 aa11.75□□□□□ -0.53
CLDN1-202ENST00000490800 GGT6Q6P531 493 aa11.74□□□□□ -0.53
CLDN1-202ENST00000490800 POTEHQ6S545 545 aa11.74□□□□□ -0.53
CLDN1-202ENST00000490800 SPOCK2Q92563 424 aa11.72□□□□□ -0.53
CLDN1-202ENST00000490800 EHBP1L1Q8N3D4 1523 aa11.71□□□□□ -0.53
CLDN1-202ENST00000490800 MBD5Q9P267 1494 aa11.71□□□□□ -0.53
CLDN1-202ENST00000490800 UHRF1BP1Q6BDS2 1440 aa11.71□□□□□ -0.53
CLDN1-202ENST00000490800 ZMYM3Q14202 1370 aa11.71□□□□□ -0.53
CLDN1-202ENST00000490800 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
CLDN1-202ENST00000490800 TIAM1Q13009 1591 aa11.71□□□□□ -0.54
CLDN1-202ENST00000490800 ATP7AQ04656 1500 aa11.7□□□□□ -0.54
CLDN1-202ENST00000490800 A2MP01023 1474 aa11.7□□□□□ -0.54
CLDN1-202ENST00000490800 NCOA2Q15596 1464 aa11.7□□□□□ -0.54
CLDN1-202ENST00000490800 KANK4Q5T7N3 995 aaPredicted RBP11.7□□□□□ -0.54
CLDN1-202ENST00000490800 RSPH4AQ5TD94 716 aa11.7□□□□□ -0.54
CLDN1-202ENST00000490800 CNTLNQ9NXG0 1405 aa11.69□□□□□ -0.54
CLDN1-202ENST00000490800 CERKQ8TCT0 537 aa11.69□□□□□ -0.54
CLDN1-202ENST00000490800 PLEKHG5O94827 1062 aa11.68□□□□□ -0.54
CLDN1-202ENST00000490800 SETD1BQ9UPS6 1966 aaKnown RBP11.68□□□□□ -0.54
CLDN1-202ENST00000490800 PREX1Q8TCU6 1659 aa11.68□□□□□ -0.54
CLDN1-202ENST00000490800 DHX29Q7Z478 1369 aaKnown RBP11.67□□□□□ -0.54
CLDN1-202ENST00000490800 SUPT6HQ7KZ85 1726 aaKnown RBP11.67□□□□□ -0.54
CLDN1-202ENST00000490800 SLC24A1O60721 1099 aa11.67□□□□□ -0.54
CLDN1-202ENST00000490800 TSPY4P0CV99 314 aa11.67□□□□□ -0.54
CLDN1-202ENST00000490800 TSPY10P0CW01 314 aa11.67□□□□□ -0.54
CLDN1-202ENST00000490800 SPDYE1Q8NFV5 336 aaPredicted RBP11.67□□□□□ -0.54
CLDN1-202ENST00000490800 C3P01024 1663 aa11.67□□□□□ -0.54
CLDN1-202ENST00000490800 RTEL1-TNFRSF6BF6WH68 1400 aa11.67□□□□□ -0.54
CLDN1-202ENST00000490800 KIF3BO15066 747 aa11.66□□□□□ -0.54
CLDN1-202ENST00000490800 INO80Q9ULG1 1556 aaPredicted RBP11.66□□□□□ -0.54
CLDN1-202ENST00000490800 LRRC9Q6ZRR7 1453 aa11.65□□□□□ -0.54
CLDN1-202ENST00000490800 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
CLDN1-202ENST00000490800 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
CLDN1-202ENST00000490800 PLXNC1O60486 1568 aa11.64□□□□□ -0.55
CLDN1-202ENST00000490800 PKD2Q13563 968 aa11.64□□□□□ -0.55
CLDN1-202ENST00000490800 CAMSAP2Q08AD1 1489 aa11.63□□□□□ -0.55
CLDN1-202ENST00000490800 CCDC141Q6ZP82 1450 aa11.63□□□□□ -0.55
CLDN1-202ENST00000490800 NPATQ14207 1427 aa11.63□□□□□ -0.55
CLDN1-202ENST00000490800 REM2Q8IYK8 340 aaPredicted RBP11.63□□□□□ -0.55
CLDN1-202ENST00000490800 STRCQ7RTU9 1775 aa11.62□□□□□ -0.55
CLDN1-202ENST00000490800 NCKAP5LQ9HCH0 1330 aa11.61□□□□□ -0.55
CLDN1-202ENST00000490800 WASHC2CQ9Y4E1 1318 aa11.61□□□□□ -0.55
CLDN1-202ENST00000490800 PTPRKQ15262 1439 aa11.61□□□□□ -0.55
CLDN1-202ENST00000490800 FBXO31Q5XUX0 539 aaPredicted RBP11.61□□□□□ -0.55
CLDN1-202ENST00000490800 ZBTB47Q9UFB7 747 aaPredicted RBP11.61□□□□□ -0.55
CLDN1-202ENST00000490800 CLTCQ00610 1675 aaKnown RBP11.61□□□□□ -0.55
CLDN1-202ENST00000490800 PTPRTO14522 1441 aa11.6□□□□□ -0.55
CLDN1-202ENST00000490800 ADGBQ8N7X0 1667 aa11.6□□□□□ -0.55
CLDN1-202ENST00000490800 MAP3K1Q13233 1512 aa11.6□□□□□ -0.55
CLDN1-202ENST00000490800 MROH2AA6NES4 1674 aa11.59□□□□□ -0.55
CLDN1-202ENST00000490800 NCOA1Q15788 1441 aa11.59□□□□□ -0.55
CLDN1-202ENST00000490800 MYOM3Q5VTT5 1437 aa11.58□□□□□ -0.56
CLDN1-202ENST00000490800 CAMSAP1Q5T5Y3 1602 aa11.57□□□□□ -0.56
CLDN1-202ENST00000490800 MIA2Q96PC5 1412 aa11.57□□□□□ -0.56
CLDN1-202ENST00000490800 ARHGEF5Q12774 1597 aa11.57□□□□□ -0.56
CLDN1-202ENST00000490800 TRIM26Q12899 539 aaPredicted RBP11.56□□□□□ -0.56
CLDN1-202ENST00000490800 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
CLDN1-202ENST00000490800 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
CLDN1-202ENST00000490800 TNRQ92752 1358 aa11.54□□□□□ -0.56
CLDN1-202ENST00000490800 RRP7BPQ9NSQ0 103 aa11.54□□□□□ -0.56
CLDN1-202ENST00000490800 CIZ1Q9ULV3 898 aaPredicted RBP11.53□□□□□ -0.56
CLDN1-202ENST00000490800 ZNF335Q9H4Z2 1342 aaPredicted RBP11.53□□□□□ -0.56
CLDN1-202ENST00000490800 A2ML1A8K2U0 1454 aa11.52□□□□□ -0.56
CLDN1-202ENST00000490800 PCGF6Q9BYE7 350 aa11.52□□□□□ -0.57
CLDN1-202ENST00000490800 CEP170BQ9Y4F5 1589 aaPredicted RBP11.52□□□□□ -0.57
CLDN1-202ENST00000490800 MYO3AQ8NEV4 1616 aa11.52□□□□□ -0.57
CLDN1-202ENST00000490800 ABCC5O15440 1437 aa11.52□□□□□ -0.57
CLDN1-202ENST00000490800 PZPP20742 1482 aa11.51□□□□□ -0.57
CLDN1-202ENST00000490800 PLA2R1Q13018 1463 aa11.51□□□□□ -0.57
CLDN1-202ENST00000490800 KDM5DQ9BY66 1539 aa11.51□□□□□ -0.57
CLDN1-202ENST00000490800 LTBP4Q8N2S1 1624 aa11.51□□□□□ -0.57
CLDN1-202ENST00000490800 PITPNM1O00562 1244 aa11.51□□□□□ -0.57
CLDN1-202ENST00000490800 THEMISQ8N1K5 641 aaPredicted RBP11.51□□□□□ -0.57
CLDN1-202ENST00000490800 CHIC2Q9UKJ5 165 aa11.51□□□□□ -0.57
CLDN1-202ENST00000490800 TCOF1Q13428 1488 aaKnown RBP11.51□□□□□ -0.57
CLDN1-202ENST00000490800 MAST1Q9Y2H9 1570 aa11.5□□□□□ -0.57
CLDN1-202ENST00000490800 ANKLE2Q86XL3 938 aa11.5□□□□□ -0.57
CLDN1-202ENST00000490800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLDN1-202ENST00000490800 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
CLDN1-202ENST00000490800 KIF15Q9NS87 1388 aa11.48□□□□□ -0.57
CLDN1-202ENST00000490800 FAM135AQ9P2D6 1515 aa11.48□□□□□ -0.57
CLDN1-202ENST00000490800 ZNF142P52746 1687 aaPredicted RBP11.48□□□□□ -0.57
CLDN1-202ENST00000490800 DUOX2Q9NRD8 1548 aa11.47□□□□□ -0.57
CLDN1-202ENST00000490800 DAPK1P53355 1430 aa11.47□□□□□ -0.57
CLDN1-202ENST00000490800 FGD6Q6ZV73 1430 aa11.47□□□□□ -0.57
CLDN1-202ENST00000490800 FAM50AQ14320 339 aaKnown RBP11.47□□□□□ -0.57
CLDN1-202ENST00000490800 CREBZFQ9NS37 354 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms