RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 IQSEC2Q5JU85 1478 aa16.29■□□□□ 0.2
TTC28-207ENST00000490475 APLP2Q06481 763 aa16.28■□□□□ 0.2
TTC28-207ENST00000490475 CEP170BQ9Y4F5 1589 aaPredicted RBP16.28■□□□□ 0.2
TTC28-207ENST00000490475 KDM5DQ9BY66 1539 aa16.28■□□□□ 0.2
TTC28-207ENST00000490475 WASHC2CQ9Y4E1 1318 aa16.26■□□□□ 0.19
TTC28-207ENST00000490475 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
TTC28-207ENST00000490475 A2ML1A8K2U0 1454 aa16.25■□□□□ 0.19
TTC28-207ENST00000490475 MYOM3Q5VTT5 1437 aa16.25■□□□□ 0.19
TTC28-207ENST00000490475 PZPP20742 1482 aa16.24■□□□□ 0.19
TTC28-207ENST00000490475 TCOF1Q13428 1488 aaKnown RBP16.22■□□□□ 0.19
TTC28-207ENST00000490475 TNRQ92752 1358 aa16.22■□□□□ 0.19
TTC28-207ENST00000490475 EIF2AK4Q9P2K8 1649 aaKnown RBP16.22■□□□□ 0.19
TTC28-207ENST00000490475 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.18
TTC28-207ENST00000490475 LTBP4Q8N2S1 1624 aa16.2■□□□□ 0.18
TTC28-207ENST00000490475 NLRP1Q9C000 1473 aa16.2■□□□□ 0.18
TTC28-207ENST00000490475 DNMT1P26358 1616 aaKnown RBP16.19■□□□□ 0.18
TTC28-207ENST00000490475 RNF17Q9BXT8 1623 aaKnown RBP16.19■□□□□ 0.18
TTC28-207ENST00000490475 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
TTC28-207ENST00000490475 NCKAP5LQ9HCH0 1330 aa16.19■□□□□ 0.18
TTC28-207ENST00000490475 THEMISQ8N1K5 641 aaPredicted RBP16.18■□□□□ 0.18
TTC28-207ENST00000490475 DUOX2Q9NRD8 1548 aa16.17■□□□□ 0.18
TTC28-207ENST00000490475 SHANK2Q9UPX8 1470 aa16.16■□□□□ 0.18
TTC28-207ENST00000490475 POLR1AO95602 1720 aaPredicted RBP16.15■□□□□ 0.18
TTC28-207ENST00000490475 FBXO31Q5XUX0 539 aaPredicted RBP16.14■□□□□ 0.17
TTC28-207ENST00000490475 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.17
TTC28-207ENST00000490475 ABCC3O15438 1527 aa16.13■□□□□ 0.17
TTC28-207ENST00000490475 UGGT1Q9NYU2 1555 aa16.13■□□□□ 0.17
TTC28-207ENST00000490475 PTPN23Q9H3S7 1636 aa16.12■□□□□ 0.17
TTC28-207ENST00000490475 ERBINQ96RT1 1412 aa16.12■□□□□ 0.17
TTC28-207ENST00000490475 ZNF335Q9H4Z2 1342 aaPredicted RBP16.12■□□□□ 0.17
TTC28-207ENST00000490475 CROCC2H7BZ55 1655 aa16.11■□□□□ 0.17
TTC28-207ENST00000490475 SPATA31D1Q6ZQQ2 1576 aa16.11■□□□□ 0.17
TTC28-207ENST00000490475 KIF15Q9NS87 1388 aa16.11■□□□□ 0.17
TTC28-207ENST00000490475 DEPDC5O75140 1603 aa16.1■□□□□ 0.17
TTC28-207ENST00000490475 FGD6Q6ZV73 1430 aa16.1■□□□□ 0.17
TTC28-207ENST00000490475 CPS1P31327 1500 aa16.09■□□□□ 0.17
TTC28-207ENST00000490475 KANK1Q14678 1352 aa16.09■□□□□ 0.17
TTC28-207ENST00000490475 ANKRD30AQ9BXX3 1397 aa16.08■□□□□ 0.16
TTC28-207ENST00000490475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.08■□□□□ 0.16
TTC28-207ENST00000490475 ABCC5O15440 1437 aa16.08■□□□□ 0.16
TTC28-207ENST00000490475 DAPK1P53355 1430 aa16.08■□□□□ 0.16
TTC28-207ENST00000490475 ARHGAP31Q2M1Z3 1444 aa16.08■□□□□ 0.16
TTC28-207ENST00000490475 MED14O60244 1454 aa16.08■□□□□ 0.16
TTC28-207ENST00000490475 PRDM15P57071 1507 aaPredicted RBP16.08■□□□□ 0.16
TTC28-207ENST00000490475 ERVK-7P63135 1459 aa16.07■□□□□ 0.16
TTC28-207ENST00000490475 MROH1Q8NDA8 1641 aa16.07■□□□□ 0.16
TTC28-207ENST00000490475 NEURL4Q96JN8 1562 aa16.06■□□□□ 0.16
TTC28-207ENST00000490475 UBAP1LF5GYI3 381 aa16.06■□□□□ 0.16
TTC28-207ENST00000490475 CEP152O94986 1710 aa16.05■□□□□ 0.16
TTC28-207ENST00000490475 RRP7BPQ9NSQ0 103 aa16.05■□□□□ 0.16
TTC28-207ENST00000490475 NPHP4O75161 1426 aaPredicted RBP16.04■□□□□ 0.16
TTC28-207ENST00000490475 TOM1O60784 492 aa16.03■□□□□ 0.16
TTC28-207ENST00000490475 CFAP65Q6ZU64 1925 aaKnown RBP16.03■□□□□ 0.16
TTC28-207ENST00000490475 IQGAP1P46940 1657 aa16.02■□□□□ 0.16
TTC28-207ENST00000490475 DISP3Q9P2K9 1392 aa16■□□□□ 0.15
TTC28-207ENST00000490475 UBR1Q8IWV7 1749 aa15.99■□□□□ 0.15
TTC28-207ENST00000490475 EID1Q9Y6B2 187 aa15.99■□□□□ 0.15
TTC28-207ENST00000490475 LMTK2Q8IWU2 1503 aa15.99■□□□□ 0.15
TTC28-207ENST00000490475 ADGRL2O95490 1459 aa15.98■□□□□ 0.15
TTC28-207ENST00000490475 VWDEQ8N2E2 1590 aa15.98■□□□□ 0.15
TTC28-207ENST00000490475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.15
TTC28-207ENST00000490475 KDM5AP29375 1690 aaKnown RBP15.98■□□□□ 0.15
TTC28-207ENST00000490475 SCAF11Q99590 1463 aaKnown RBP15.97■□□□□ 0.15
TTC28-207ENST00000490475 SLIT1O75093 1534 aa15.97■□□□□ 0.15
TTC28-207ENST00000490475 STAG3Q9UJ98 1225 aa15.96■□□□□ 0.15
TTC28-207ENST00000490475 CHIC2Q9UKJ5 165 aa15.96■□□□□ 0.15
TTC28-207ENST00000490475 FAM50AQ14320 339 aaKnown RBP15.95■□□□□ 0.14
TTC28-207ENST00000490475 ARHGAP23Q9P227 1491 aa15.95■□□□□ 0.14
TTC28-207ENST00000490475 SYNMO15061 1565 aa15.95■□□□□ 0.14
TTC28-207ENST00000490475 TXNDC2Q86VQ3 553 aa15.94■□□□□ 0.14
TTC28-207ENST00000490475 RPRD2Q5VT52 1461 aaKnown RBP15.93■□□□□ 0.14
TTC28-207ENST00000490475 ANKRD50Q9ULJ7 1429 aa15.93■□□□□ 0.14
TTC28-207ENST00000490475 SLC52A1Q9NWF4 448 aa15.92■□□□□ 0.14
TTC28-207ENST00000490475 EFCAB6Q5THR3 1501 aa15.92■□□□□ 0.14
TTC28-207ENST00000490475 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
TTC28-207ENST00000490475 TMEM2Q9UHN6 1383 aa15.91■□□□□ 0.14
TTC28-207ENST00000490475 PIK3C2BO00750 1634 aa15.9■□□□□ 0.14
TTC28-207ENST00000490475 PPARGC1BQ86YN6 1023 aaKnown RBP15.9■□□□□ 0.14
TTC28-207ENST00000490475 NOS1P29475 1434 aa15.89■□□□□ 0.13
TTC28-207ENST00000490475 PIP4K2BP78356 416 aa15.89■□□□□ 0.13
TTC28-207ENST00000490475 LTKP29376 864 aa15.88■□□□□ 0.13
TTC28-207ENST00000490475 HDGFP51858 240 aaKnown RBP15.88■□□□□ 0.13
TTC28-207ENST00000490475 IDI1Q13907 227 aa15.88■□□□□ 0.13
TTC28-207ENST00000490475 LRRC7Q96NW7 1537 aa15.88■□□□□ 0.13
TTC28-207ENST00000490475 ROCK1Q13464 1354 aa15.87■□□□□ 0.13
TTC28-207ENST00000490475 TET3O43151 1660 aa15.86■□□□□ 0.13
TTC28-207ENST00000490475 ADGRB3O60242 1522 aa15.85■□□□□ 0.13
TTC28-207ENST00000490475 STRCP1A6NGW2 1772 aa15.85■□□□□ 0.13
TTC28-207ENST00000490475 GCC2Q8IWJ2 1684 aa15.84■□□□□ 0.13
TTC28-207ENST00000490475 SOCS7O14512 581 aa15.84■□□□□ 0.13
TTC28-207ENST00000490475 HSPA1LP34931 641 aa15.84■□□□□ 0.13
TTC28-207ENST00000490475 UNC13BO14795 1591 aa15.83■□□□□ 0.12
TTC28-207ENST00000490475 KCNA6P17658 529 aa15.81■□□□□ 0.12
TTC28-207ENST00000490475 ILDR2Q71H61 639 aa15.81■□□□□ 0.12
TTC28-207ENST00000490475 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.79■□□□□ 0.12
TTC28-207ENST00000490475 ALKQ9UM73 1620 aa15.78■□□□□ 0.12
TTC28-207ENST00000490475 NKTRP30414 1462 aaKnown RBP15.78■□□□□ 0.12
TTC28-207ENST00000490475 IQGAP3Q86VI3 1631 aa15.77■□□□□ 0.12
TTC28-207ENST00000490475 PPP1R15AO75807 674 aaPredicted RBP15.77■□□□□ 0.12
TTC28-207ENST00000490475 BCANQ96GW7 911 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms