RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 GPR37O15354 613 aa8.69□□□□□ -1.02
CD46-216ENST00000490278 EN1Q05925 392 aaPredicted RBP8.69□□□□□ -1.02
CD46-216ENST00000490278 TYW1BQ6NUM6 668 aa8.69□□□□□ -1.02
CD46-216ENST00000490278 FBXW7Q969H0 707 aa8.69□□□□□ -1.02
CD46-216ENST00000490278 FOSBP53539 338 aa8.68□□□□□ -1.02
CD46-216ENST00000490278 MAP3K7O43318 606 aa8.67□□□□□ -1.02
CD46-216ENST00000490278 FCHSD2O94868 740 aa8.67□□□□□ -1.02
CD46-216ENST00000490278 ZNF454Q8N9F8 522 aa8.67□□□□□ -1.02
CD46-216ENST00000490278 KRI1Q8N9T8 703 aaKnown RBP8.67□□□□□ -1.02
CD46-216ENST00000490278 RBM33Q96EV2 1170 aaKnown RBP8.67□□□□□ -1.02
CD46-216ENST00000490278 HIC1Q14526 733 aa8.66□□□□□ -1.02
CD46-216ENST00000490278 MYT1LQ9UL68 1186 aa8.66□□□□□ -1.02
CD46-216ENST00000490278 PTGDRQ13258 359 aa8.65□□□□□ -1.02
CD46-216ENST00000490278 ZDHHC16Q969W1 377 aa8.65□□□□□ -1.02
CD46-216ENST00000490278 LHX6Q9UPM6 363 aa8.65□□□□□ -1.02
CD46-216ENST00000490278 GNPATO15228 680 aa8.64□□□□□ -1.03
CD46-216ENST00000490278 VARS2Q5ST30 1063 aaKnown RBP8.64□□□□□ -1.03
CD46-216ENST00000490278 AK7Q96M32 723 aa8.64□□□□□ -1.03
CD46-216ENST00000490278 PSDA5PKW4 1024 aaPredicted RBP8.63□□□□□ -1.03
CD46-216ENST00000490278 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
CD46-216ENST00000490278 CDHR5Q9HBB8 845 aa8.63□□□□□ -1.03
CD46-216ENST00000490278 MINK1Q8N4C8 1332 aaPredicted RBP8.61□□□□□ -1.03
CD46-216ENST00000490278 MAP2K5Q13163 448 aa8.61□□□□□ -1.03
CD46-216ENST00000490278 PPP4R3BQ5MIZ7 849 aa8.61□□□□□ -1.03
CD46-216ENST00000490278 C6orf132Q5T0Z8 1188 aa8.61□□□□□ -1.03
CD46-216ENST00000490278 ZNF687Q8N1G0 1237 aa8.61□□□□□ -1.03
CD46-216ENST00000490278 NPDC1Q9NQX5 325 aaPredicted RBP8.61□□□□□ -1.03
CD46-216ENST00000490278 ADAM33Q9BZ11 813 aa8.6□□□□□ -1.03
CD46-216ENST00000490278 FECHP22830 423 aa8.59□□□□□ -1.03
CD46-216ENST00000490278 CERKQ8TCT0 537 aa8.59□□□□□ -1.03
CD46-216ENST00000490278 IRF6O14896 467 aa8.58□□□□□ -1.04
CD46-216ENST00000490278 BRPF1P55201 1214 aaPredicted RBP8.58□□□□□ -1.04
CD46-216ENST00000490278 TRIM66O15016 1216 aa8.56□□□□□ -1.04
CD46-216ENST00000490278 NEUROD2Q15784 382 aa8.56□□□□□ -1.04
CD46-216ENST00000490278 CCDC102AQ96A19 550 aa8.56□□□□□ -1.04
CD46-216ENST00000490278 BCL2L12Q9HB09 334 aa8.56□□□□□ -1.04
CD46-216ENST00000490278 PTPREP23469 700 aa8.53□□□□□ -1.04
CD46-216ENST00000490278 PDE4DQ08499 809 aa8.53□□□□□ -1.04
CD46-216ENST00000490278 RBM27Q9P2N5 1060 aaKnown RBP8.53□□□□□ -1.04
CD46-216ENST00000490278 PADI6Q6TGC4 694 aa8.52□□□□□ -1.05
CD46-216ENST00000490278 PRSS12P56730 875 aa8.51□□□□□ -1.05
CD46-216ENST00000490278 PPP1R3GB7ZBB8 358 aa8.5□□□□□ -1.05
CD46-216ENST00000490278 COL9A1P20849 921 aa8.5□□□□□ -1.05
CD46-216ENST00000490278 TTC13Q8NBP0 860 aa8.5□□□□□ -1.05
CD46-216ENST00000490278 CDCA7LQ96GN5 454 aa8.5□□□□□ -1.05
CD46-216ENST00000490278 AMHR2Q16671 573 aa8.49□□□□□ -1.05
CD46-216ENST00000490278 ANKRD13DQ6ZTN6 518 aa8.49□□□□□ -1.05
CD46-216ENST00000490278 KCNH8Q96L42 1107 aa8.49□□□□□ -1.05
CD46-216ENST00000490278 GPBP1L1Q9HC44 474 aaPredicted RBP8.49□□□□□ -1.05
CD46-216ENST00000490278 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
CD46-216ENST00000490278 KCNK17Q96T54 332 aa8.48□□□□□ -1.05
CD46-216ENST00000490278 OATP04181 439 aa8.47□□□□□ -1.05
CD46-216ENST00000490278 KDM4CQ9H3R0 1056 aa8.47□□□□□ -1.05
CD46-216ENST00000490278 ADGRG1Q9Y653 693 aa8.47□□□□□ -1.05
CD46-216ENST00000490278 TTLL12Q14166 644 aaPredicted RBP8.45□□□□□ -1.06
CD46-216ENST00000490278 FAM161AQ3B820 660 aa8.45□□□□□ -1.06
CD46-216ENST00000490278 METTL3Q86U44 580 aaKnown RBP8.45□□□□□ -1.06
CD46-216ENST00000490278 PARP9Q8IXQ6 854 aa8.45□□□□□ -1.06
CD46-216ENST00000490278 TRIM6-TRIM34B2RNG4 842 aa8.44□□□□□ -1.06
CD46-216ENST00000490278 ARHGAP33O14559 1287 aa8.44□□□□□ -1.06
CD46-216ENST00000490278 LSM11P83369 360 aaKnown RBP eCLIP8.44□□□□□ -1.06
CD46-216ENST00000490278 RBM46Q8TBY0 533 aaKnown RBP8.44□□□□□ -1.06
CD46-216ENST00000490278 PHOX2BQ99453 314 aa8.44□□□□□ -1.06
CD46-216ENST00000490278 FAM198AQ9UFP1 575 aa8.44□□□□□ -1.06
CD46-216ENST00000490278 TSKSQ9UJT2 592 aa8.44□□□□□ -1.06
CD46-216ENST00000490278 PSEN2P49810 448 aa8.43□□□□□ -1.06
CD46-216ENST00000490278 PXYLP1Q8TE99 480 aa8.43□□□□□ -1.06
CD46-216ENST00000490278 ONECUT3O60422 494 aaPredicted RBP8.42□□□□□ -1.06
CD46-216ENST00000490278 PBX2P40425 430 aa8.42□□□□□ -1.06
CD46-216ENST00000490278 POTEEQ6S8J3 1075 aa8.42□□□□□ -1.06
CD46-216ENST00000490278 PACS2Q86VP3 889 aa8.42□□□□□ -1.06
CD46-216ENST00000490278 DAXXQ9UER7 740 aaPredicted RBP8.42□□□□□ -1.06
CD46-216ENST00000490278 NBPF26B4DH59 902 aa8.41□□□□□ -1.06
CD46-216ENST00000490278 CLCN1P35523 988 aa8.41□□□□□ -1.06
CD46-216ENST00000490278 MDM2Q00987 491 aaPredicted RBP8.41□□□□□ -1.06
CD46-216ENST00000490278 PROX2Q3B8N5 592 aa8.41□□□□□ -1.06
CD46-216ENST00000490278 ZBED2Q9BTP6 218 aa8.41□□□□□ -1.06
CD46-216ENST00000490278 GIGYF2Q6Y7W6 1299 aaKnown RBP8.4□□□□□ -1.06
CD46-216ENST00000490278 EYA1Q99502 592 aa8.4□□□□□ -1.06
CD46-216ENST00000490278 GPCPD1Q9NPB8 672 aa8.4□□□□□ -1.06
CD46-216ENST00000490278 AXIN2Q9Y2T1 843 aa8.4□□□□□ -1.06
CD46-216ENST00000490278 NUDT18Q6ZVK8 323 aa8.39□□□□□ -1.07
CD46-216ENST00000490278 IL27Q8NEV9 243 aa8.39□□□□□ -1.07
CD46-216ENST00000490278 TATDN2Q93075 761 aa8.39□□□□□ -1.07
CD46-216ENST00000490278 TMUB1Q9BVT8 246 aa8.39□□□□□ -1.07
CD46-216ENST00000490278 REPIN1Q9BWE0 567 aaKnown RBP8.39□□□□□ -1.07
CD46-216ENST00000490278 SLC4A5Q9BY07 1137 aa8.39□□□□□ -1.07
CD46-216ENST00000490278 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
CD46-216ENST00000490278 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
CD46-216ENST00000490278 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
CD46-216ENST00000490278 NLRP7Q8WX94 980 aa8.38□□□□□ -1.07
CD46-216ENST00000490278 FAM117AQ9C073 453 aa8.38□□□□□ -1.07
CD46-216ENST00000490278 KIAA1468Q9P260 1216 aa8.38□□□□□ -1.07
CD46-216ENST00000490278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.37□□□□□ -1.07
CD46-216ENST00000490278 C3orf80F5H4A9 247 aa8.37□□□□□ -1.07
CD46-216ENST00000490278 DDRGK1Q96HY6 314 aa8.37□□□□□ -1.07
CD46-216ENST00000490278 RCCD1A6NED2 376 aa8.36□□□□□ -1.07
CD46-216ENST00000490278 RABGEF1Q9UJ41 708 aa8.36□□□□□ -1.07
CD46-216ENST00000490278 SMAPO00193 183 aa8.35□□□□□ -1.07
CD46-216ENST00000490278 MS4A1P11836 297 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms