RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 POM121Q96HA1 1249 aa5.13□□□□□ -1.59
UBXN4-208ENST00000490163 PCMTD1Q96MG8 357 aaPredicted RBP5.13□□□□□ -1.59
UBXN4-208ENST00000490163 FAM217BQ9NTX9 383 aaPredicted RBP5.13□□□□□ -1.59
UBXN4-208ENST00000490163 TMEM259Q4ZIN3 620 aa5.12□□□□□ -1.59
UBXN4-208ENST00000490163 MAP3K13O43283 966 aa5.12□□□□□ -1.59
UBXN4-208ENST00000490163 CFAP70Q5T0N1 1121 aa5.11□□□□□ -1.59
UBXN4-208ENST00000490163 PDCD7Q8N8D1 485 aaKnown RBP5.11□□□□□ -1.59
UBXN4-208ENST00000490163 RETREG2Q8NC44 543 aa5.11□□□□□ -1.59
UBXN4-208ENST00000490163 MTMR7Q9Y216 660 aa5.11□□□□□ -1.59
UBXN4-208ENST00000490163 TXNDC2Q86VQ3 553 aa5.1□□□□□ -1.59
UBXN4-208ENST00000490163 PTCD2Q8WV60 388 aaKnown RBP5.1□□□□□ -1.59
UBXN4-208ENST00000490163 GJD4Q96KN9 370 aaPredicted RBP5.1□□□□□ -1.59
UBXN4-208ENST00000490163 DNAJC14Q6Y2X3 702 aaPredicted RBP5.1□□□□□ -1.59
UBXN4-208ENST00000490163 TIE1P35590 1138 aa5.09□□□□□ -1.59
UBXN4-208ENST00000490163 PIP4P2Q8N4L2 257 aa5.09□□□□□ -1.59
UBXN4-208ENST00000490163 C8orf37Q96NL8 207 aa5.09□□□□□ -1.59
UBXN4-208ENST00000490163 DPYSL4O14531 572 aa5.09□□□□□ -1.59
UBXN4-208ENST00000490163 MFAP1P55081 439 aaKnown RBP5.09□□□□□ -1.59
UBXN4-208ENST00000490163 NOM1Q5C9Z4 860 aaKnown RBP5.08□□□□□ -1.6
UBXN4-208ENST00000490163 CABP2Q9NPB3 220 aa5.08□□□□□ -1.6
UBXN4-208ENST00000490163 SPTLC1O15269 473 aa5.08□□□□□ -1.6
UBXN4-208ENST00000490163 GPCPD1Q9NPB8 672 aa5.08□□□□□ -1.6
UBXN4-208ENST00000490163 KRI1Q8N9T8 703 aaKnown RBP5.07□□□□□ -1.6
UBXN4-208ENST00000490163 MTMR14Q8NCE2 650 aa5.07□□□□□ -1.6
UBXN4-208ENST00000490163 ATG7O95352 703 aa5.07□□□□□ -1.6
UBXN4-208ENST00000490163 IRX5P78411 483 aaPredicted RBP5.07□□□□□ -1.6
UBXN4-208ENST00000490163 MYSM1Q5VVJ2 828 aa5.07□□□□□ -1.6
UBXN4-208ENST00000490163 LHX8Q68G74 356 aa5.07□□□□□ -1.6
UBXN4-208ENST00000490163 UNCXA6NJT0 531 aa5.07□□□□□ -1.6
UBXN4-208ENST00000490163 ALG2Q9H553 416 aa5.07□□□□□ -1.6
UBXN4-208ENST00000490163 PHF14O94880 888 aa5.06□□□□□ -1.6
UBXN4-208ENST00000490163 ERCC3P19447 782 aa5.06□□□□□ -1.6
UBXN4-208ENST00000490163 CLCN1P35523 988 aa5.06□□□□□ -1.6
UBXN4-208ENST00000490163 CLCN6P51797 869 aa5.06□□□□□ -1.6
UBXN4-208ENST00000490163 EN1Q05925 392 aaPredicted RBP5.06□□□□□ -1.6
UBXN4-208ENST00000490163 ADAMTS19Q8TE59 1207 aa5.06□□□□□ -1.6
UBXN4-208ENST00000490163 LILRB3O75022 631 aa5.05□□□□□ -1.6
UBXN4-208ENST00000490163 RFC5P40937 340 aa5.05□□□□□ -1.6
UBXN4-208ENST00000490163 SND1Q7KZF4 910 aaKnown RBP eCLIP5.05□□□□□ -1.6
UBXN4-208ENST00000490163 MICALL2Q8IY33 904 aa5.05□□□□□ -1.6
UBXN4-208ENST00000490163 PRPF38BQ5VTL8 546 aaKnown RBP5.05□□□□□ -1.6
UBXN4-208ENST00000490163 PBXIP1Q96AQ6 731 aa5.05□□□□□ -1.6
UBXN4-208ENST00000490163 EPAS1Q99814 870 aa5.04□□□□□ -1.6
UBXN4-208ENST00000490163 IER5LQ5T953 404 aa5.04□□□□□ -1.6
UBXN4-208ENST00000490163 C7P10643 843 aa5.02□□□□□ -1.61
UBXN4-208ENST00000490163 PROCA1Q8NCQ7 364 aaPredicted RBP5.02□□□□□ -1.61
UBXN4-208ENST00000490163 PXYLP1Q8TE99 480 aa5.02□□□□□ -1.61
UBXN4-208ENST00000490163 SNRKQ9NRH2 765 aa5.02□□□□□ -1.61
UBXN4-208ENST00000490163 CHIC2Q9UKJ5 165 aa5.02□□□□□ -1.61
UBXN4-208ENST00000490163 SSTR3P32745 418 aaPredicted RBP5.02□□□□□ -1.61
UBXN4-208ENST00000490163 C1orf216Q8TAB5 229 aa5.01□□□□□ -1.61
UBXN4-208ENST00000490163 ADGRG1Q9Y653 693 aa5.01□□□□□ -1.61
UBXN4-208ENST00000490163 C19orf67A6NJJ6 358 aa5.01□□□□□ -1.61
UBXN4-208ENST00000490163 TMCO4Q5TGY1 634 aa5.01□□□□□ -1.61
UBXN4-208ENST00000490163 DIXDC1Q155Q3 683 aa5.01□□□□□ -1.61
UBXN4-208ENST00000490163 PHLDB3Q6NSJ2 640 aa5.01□□□□□ -1.61
UBXN4-208ENST00000490163 RAD21O60216 631 aa5□□□□□ -1.61
UBXN4-208ENST00000490163 COL19A1Q14993 1142 aa5□□□□□ -1.61
UBXN4-208ENST00000490163 CCDC125Q86Z20 511 aa5□□□□□ -1.61
UBXN4-208ENST00000490163 EYA1Q99502 592 aa5□□□□□ -1.61
UBXN4-208ENST00000490163 ZNF777Q9ULD5 760 aaPredicted RBP5□□□□□ -1.61
UBXN4-208ENST00000490163 PLPP6Q8IY26 295 aa5□□□□□ -1.61
UBXN4-208ENST00000490163 L3MBTL3Q96JM7 780 aaPredicted RBP5□□□□□ -1.61
UBXN4-208ENST00000490163 CD46P15529 392 aa4.99□□□□□ -1.61
UBXN4-208ENST00000490163 TMEM92Q6UXU6 159 aa4.99□□□□□ -1.61
UBXN4-208ENST00000490163 METTL3Q86U44 580 aaKnown RBP4.99□□□□□ -1.61
UBXN4-208ENST00000490163 NFATC2IPQ8NCF5 419 aa4.99□□□□□ -1.61
UBXN4-208ENST00000490163 CERKQ8TCT0 537 aa4.99□□□□□ -1.61
UBXN4-208ENST00000490163 GZF1Q9H116 711 aaPredicted RBP4.99□□□□□ -1.61
UBXN4-208ENST00000490163 DKK1O94907 266 aa4.98□□□□□ -1.61
UBXN4-208ENST00000490163 EVX2Q03828 476 aa4.98□□□□□ -1.61
UBXN4-208ENST00000490163 KIAA1522Q9P206 1035 aaPredicted RBP4.98□□□□□ -1.61
UBXN4-208ENST00000490163 TTLL13PA6NNM8 815 aa4.98□□□□□ -1.61
UBXN4-208ENST00000490163 RSBN1LQ6PCB5 846 aaPredicted RBP4.98□□□□□ -1.61
UBXN4-208ENST00000490163 CANXP27824 592 aaKnown RBP4.98□□□□□ -1.61
UBXN4-208ENST00000490163 ASTLQ6HA08 431 aaPredicted RBP4.98□□□□□ -1.61
UBXN4-208ENST00000490163 OATP04181 439 aa4.97□□□□□ -1.61
UBXN4-208ENST00000490163 SPIRE2Q8WWL2 714 aa4.97□□□□□ -1.61
UBXN4-208ENST00000490163 CLK2P49760 499 aaKnown RBP4.97□□□□□ -1.61
UBXN4-208ENST00000490163 FAM69CQ0P6D2 419 aa4.97□□□□□ -1.61
UBXN4-208ENST00000490163 ECM1Q16610 540 aa4.97□□□□□ -1.61
UBXN4-208ENST00000490163 TRPC6Q9Y210 931 aa4.97□□□□□ -1.61
UBXN4-208ENST00000490163 KANK4Q5T7N3 995 aaPredicted RBP4.96□□□□□ -1.61
UBXN4-208ENST00000490163 PLEKHM2Q8IWE5 1019 aa4.96□□□□□ -1.61
UBXN4-208ENST00000490163 TRIM34Q9BYJ4 488 aa4.96□□□□□ -1.61
UBXN4-208ENST00000490163 GLMNQ92990 594 aa4.96□□□□□ -1.62
UBXN4-208ENST00000490163 TBC1D2Q9BYX2 928 aa4.96□□□□□ -1.62
UBXN4-208ENST00000490163 BMP2KQ9NSY1 1161 aaPredicted RBP4.96□□□□□ -1.62
UBXN4-208ENST00000490163 LIMD1Q9UGP4 676 aa4.96□□□□□ -1.62
UBXN4-208ENST00000490163 ZC3H4Q9UPT8 1303 aaKnown RBP4.95□□□□□ -1.62
UBXN4-208ENST00000490163 SOX11P35716 441 aa4.95□□□□□ -1.62
UBXN4-208ENST00000490163 RSPH4AQ5TD94 716 aa4.95□□□□□ -1.62
UBXN4-208ENST00000490163 CCDC97Q96F63 343 aaPredicted RBP4.95□□□□□ -1.62
UBXN4-208ENST00000490163 UCN2Q96RP3 112 aa4.95□□□□□ -1.62
UBXN4-208ENST00000490163 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.95□□□□□ -1.62
UBXN4-208ENST00000490163 SIRT1Q96EB6 747 aa4.95□□□□□ -1.62
UBXN4-208ENST00000490163 POM121CA8CG34 1229 aa4.95□□□□□ -1.62
UBXN4-208ENST00000490163 E9PSI1 815 aa4.95□□□□□ -1.62
UBXN4-208ENST00000490163 EVI5O60447 810 aa4.95□□□□□ -1.62
UBXN4-208ENST00000490163 WASHC4Q2M389 1173 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms