RNA–Protein interactions for RNA: ENST00000490017.1

MMP23B-208, Transcript of matrix metallopeptidase 23B, humanhuman

TSL 3

Gene MMP23B, Length 530 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP23B-208ENST00000490017 CHIC2Q9UKJ5 165 aa22.11■■□□□ 1.13
MMP23B-208ENST00000490017 CROCC2H7BZ55 1655 aa22.11■■□□□ 1.13
MMP23B-208ENST00000490017 PTPRKQ15262 1439 aa22.1■■□□□ 1.13
MMP23B-208ENST00000490017 DUOX2Q9NRD8 1548 aa22.1■■□□□ 1.13
MMP23B-208ENST00000490017 KIF15Q9NS87 1388 aa22.1■■□□□ 1.13
MMP23B-208ENST00000490017 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
MMP23B-208ENST00000490017 KDM5DQ9BY66 1539 aa22.09■■□□□ 1.13
MMP23B-208ENST00000490017 FAM135AQ9P2D6 1515 aa22.08■■□□□ 1.13
MMP23B-208ENST00000490017 EIF2AK4Q9P2K8 1649 aaKnown RBP22.07■■□□□ 1.12
MMP23B-208ENST00000490017 DMRT2Q9Y5R5 561 aa22.07■■□□□ 1.12
MMP23B-208ENST00000490017 ANKRD30AQ9BXX3 1397 aa22.06■■□□□ 1.12
MMP23B-208ENST00000490017 FBXO31Q5XUX0 539 aaPredicted RBP22.05■■□□□ 1.12
MMP23B-208ENST00000490017 RNF17Q9BXT8 1623 aaKnown RBP22.04■■□□□ 1.12
MMP23B-208ENST00000490017 STRCQ7RTU9 1775 aa22.02■■□□□ 1.12
MMP23B-208ENST00000490017 ERBINQ96RT1 1412 aa22.02■■□□□ 1.12
MMP23B-208ENST00000490017 PZPP20742 1482 aa22.02■■□□□ 1.12
MMP23B-208ENST00000490017 NCOA1Q15788 1441 aa22■■□□□ 1.11
MMP23B-208ENST00000490017 MYO3AQ8NEV4 1616 aa22■■□□□ 1.11
MMP23B-208ENST00000490017 ILDR1Q86SU0 546 aaPredicted RBP22■■□□□ 1.11
MMP23B-208ENST00000490017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22■■□□□ 1.11
MMP23B-208ENST00000490017 TNRQ92752 1358 aa21.99■■□□□ 1.11
MMP23B-208ENST00000490017 ABCC3O15438 1527 aa21.98■■□□□ 1.11
MMP23B-208ENST00000490017 ZC3H13Q5T200 1668 aaKnown RBP21.98■■□□□ 1.11
MMP23B-208ENST00000490017 CAMSAP1Q5T5Y3 1602 aa21.97■■□□□ 1.11
MMP23B-208ENST00000490017 MROH1Q8NDA8 1641 aa21.97■■□□□ 1.11
MMP23B-208ENST00000490017 CEP170BQ9Y4F5 1589 aaPredicted RBP21.96■■□□□ 1.11
MMP23B-208ENST00000490017 ZNF142P52746 1687 aaPredicted RBP21.96■■□□□ 1.11
MMP23B-208ENST00000490017 KANK1Q14678 1352 aa21.95■■□□□ 1.1
MMP23B-208ENST00000490017 ADGRL2O95490 1459 aa21.95■■□□□ 1.1
MMP23B-208ENST00000490017 A2ML1A8K2U0 1454 aa21.94■■□□□ 1.1
MMP23B-208ENST00000490017 PTPRTO14522 1441 aa21.93■■□□□ 1.1
MMP23B-208ENST00000490017 CEP152O94986 1710 aa21.93■■□□□ 1.1
MMP23B-208ENST00000490017 NCKAP5LQ9HCH0 1330 aa21.93■■□□□ 1.1
MMP23B-208ENST00000490017 PKD2Q13563 968 aa21.92■■□□□ 1.1
MMP23B-208ENST00000490017 CFAP65Q6ZU64 1925 aaKnown RBP21.92■■□□□ 1.1
MMP23B-208ENST00000490017 PRDM15P57071 1507 aaPredicted RBP21.91■■□□□ 1.1
MMP23B-208ENST00000490017 ITGAEP38570 1179 aa21.91■■□□□ 1.1
MMP23B-208ENST00000490017 DEPDC5O75140 1603 aa21.89■■□□□ 1.09
MMP23B-208ENST00000490017 THEMISQ8N1K5 641 aaPredicted RBP21.89■■□□□ 1.09
MMP23B-208ENST00000490017 FBXO41Q8TF61 875 aa21.89■■□□□ 1.09
MMP23B-208ENST00000490017 PLA2R1Q13018 1463 aa21.89■■□□□ 1.09
MMP23B-208ENST00000490017 NLRP1Q9C000 1473 aa21.89■■□□□ 1.09
MMP23B-208ENST00000490017 ANKRD50Q9ULJ7 1429 aa21.89■■□□□ 1.09
MMP23B-208ENST00000490017 CERKQ8TCT0 537 aa21.88■■□□□ 1.09
MMP23B-208ENST00000490017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.87■■□□□ 1.09
MMP23B-208ENST00000490017 ERVK-7P63135 1459 aa21.86■■□□□ 1.09
MMP23B-208ENST00000490017 ARHGAP31Q2M1Z3 1444 aa21.86■■□□□ 1.09
MMP23B-208ENST00000490017 SPATA31D1Q6ZQQ2 1576 aa21.86■■□□□ 1.09
MMP23B-208ENST00000490017 ROCK1Q13464 1354 aa21.85■■□□□ 1.09
MMP23B-208ENST00000490017 UGGT1Q9NYU2 1555 aa21.83■■□□□ 1.09
MMP23B-208ENST00000490017 ANKLE2Q86XL3 938 aa21.83■■□□□ 1.09
MMP23B-208ENST00000490017 VWDEQ8N2E2 1590 aa21.81■■□□□ 1.08
MMP23B-208ENST00000490017 LMTK2Q8IWU2 1503 aa21.8■■□□□ 1.08
MMP23B-208ENST00000490017 RRBP1Q9P2E9 1410 aaKnown RBP21.77■■□□□ 1.08
MMP23B-208ENST00000490017 POLR1AO95602 1720 aaPredicted RBP21.75■■□□□ 1.07
MMP23B-208ENST00000490017 STAG3Q9UJ98 1225 aa21.74■■□□□ 1.07
MMP23B-208ENST00000490017 EFCAB6Q5THR3 1501 aa21.73■■□□□ 1.07
MMP23B-208ENST00000490017 ZNF335Q9H4Z2 1342 aaPredicted RBP21.73■■□□□ 1.07
MMP23B-208ENST00000490017 LTBP4Q8N2S1 1624 aa21.71■■□□□ 1.07
MMP23B-208ENST00000490017 IDI1Q13907 227 aa21.71■■□□□ 1.07
MMP23B-208ENST00000490017 UBR1Q8IWV7 1749 aa21.71■■□□□ 1.07
MMP23B-208ENST00000490017 UNC13BO14795 1591 aa21.7■■□□□ 1.06
MMP23B-208ENST00000490017 NEURL4Q96JN8 1562 aa21.7■■□□□ 1.06
MMP23B-208ENST00000490017 NUP155O75694 1391 aa21.69■■□□□ 1.06
MMP23B-208ENST00000490017 RPRD2Q5VT52 1461 aaKnown RBP21.69■■□□□ 1.06
MMP23B-208ENST00000490017 SLC52A1Q9NWF4 448 aa21.68■■□□□ 1.06
MMP23B-208ENST00000490017 NPHP4O75161 1426 aaPredicted RBP21.68■■□□□ 1.06
MMP23B-208ENST00000490017 NOS1P29475 1434 aa21.68■■□□□ 1.06
MMP23B-208ENST00000490017 TET3O43151 1660 aa21.68■■□□□ 1.06
MMP23B-208ENST00000490017 PIK3C2BO00750 1634 aa21.67■■□□□ 1.06
MMP23B-208ENST00000490017 MED14O60244 1454 aa21.67■■□□□ 1.06
MMP23B-208ENST00000490017 TXNDC2Q86VQ3 553 aa21.67■■□□□ 1.06
MMP23B-208ENST00000490017 EID1Q9Y6B2 187 aa21.67■■□□□ 1.06
MMP23B-208ENST00000490017 SYNMO15061 1565 aa21.65■■□□□ 1.06
MMP23B-208ENST00000490017 GCC2Q8IWJ2 1684 aa21.65■■□□□ 1.06
MMP23B-208ENST00000490017 LTKP29376 864 aa21.64■■□□□ 1.05
MMP23B-208ENST00000490017 IQGAP3Q86VI3 1631 aa21.63■■□□□ 1.05
MMP23B-208ENST00000490017 TMEM2Q9UHN6 1383 aa21.62■■□□□ 1.05
MMP23B-208ENST00000490017 SLIT1O75093 1534 aa21.62■■□□□ 1.05
MMP23B-208ENST00000490017 SCAF11Q99590 1463 aaKnown RBP21.62■■□□□ 1.05
MMP23B-208ENST00000490017 ARHGAP23Q9P227 1491 aa21.62■■□□□ 1.05
MMP23B-208ENST00000490017 IQGAP1P46940 1657 aa21.62■■□□□ 1.05
MMP23B-208ENST00000490017 KDM5AP29375 1690 aaKnown RBP21.61■■□□□ 1.05
MMP23B-208ENST00000490017 IQSEC2Q5JU85 1478 aa21.61■■□□□ 1.05
MMP23B-208ENST00000490017 NAIPQ13075 1403 aa21.6■■□□□ 1.05
MMP23B-208ENST00000490017 E9PCH4 1651 aa21.6■■□□□ 1.05
MMP23B-208ENST00000490017 CHGAP10645 457 aaKnown RBP21.56■■□□□ 1.04
MMP23B-208ENST00000490017 ADGRB3O60242 1522 aa21.55■■□□□ 1.04
MMP23B-208ENST00000490017 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
MMP23B-208ENST00000490017 CPS1P31327 1500 aa21.55■■□□□ 1.04
MMP23B-208ENST00000490017 HFM1A2PYH4 1435 aa21.55■■□□□ 1.04
MMP23B-208ENST00000490017 UBAP1LF5GYI3 381 aa21.54■■□□□ 1.04
MMP23B-208ENST00000490017 HDGFP51858 240 aaKnown RBP21.54■■□□□ 1.04
MMP23B-208ENST00000490017 BCANQ96GW7 911 aa21.52■■□□□ 1.04
MMP23B-208ENST00000490017 TMEM131LA2VDJ0 1609 aa21.5■■□□□ 1.03
MMP23B-208ENST00000490017 MYO5BQ9ULV0 1848 aa21.5■■□□□ 1.03
MMP23B-208ENST00000490017 PPP1R15AO75807 674 aaPredicted RBP21.49■■□□□ 1.03
MMP23B-208ENST00000490017 SLC26A8Q96RN1 970 aa21.48■■□□□ 1.03
MMP23B-208ENST00000490017 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.47■■□□□ 1.03
MMP23B-208ENST00000490017 RIMS2Q9UQ26 1411 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms