RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 PCDHGA10Q9Y5H3 936 aa12.67□□□□□ -0.38
VPS26A-206ENST00000489794 ZMYND10O75800 440 aa12.66□□□□□ -0.38
VPS26A-206ENST00000489794 ZNF454Q8N9F8 522 aa12.65□□□□□ -0.38
VPS26A-206ENST00000489794 MAP3K7O43318 606 aa12.64□□□□□ -0.39
VPS26A-206ENST00000489794 FCHSD2O94868 740 aa12.64□□□□□ -0.39
VPS26A-206ENST00000489794 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
VPS26A-206ENST00000489794 ZNF687Q8N1G0 1237 aa12.64□□□□□ -0.39
VPS26A-206ENST00000489794 ZDHHC16Q969W1 377 aa12.64□□□□□ -0.39
VPS26A-206ENST00000489794 BARGINQ6ZT62 677 aa12.62□□□□□ -0.39
VPS26A-206ENST00000489794 LHX6Q9UPM6 363 aa12.62□□□□□ -0.39
VPS26A-206ENST00000489794 HIC1Q14526 733 aa12.61□□□□□ -0.39
VPS26A-206ENST00000489794 CERKQ8TCT0 537 aa12.6□□□□□ -0.39
VPS26A-206ENST00000489794 RBM33Q96EV2 1170 aaKnown RBP12.58□□□□□ -0.4
VPS26A-206ENST00000489794 GNPATO15228 680 aa12.57□□□□□ -0.4
VPS26A-206ENST00000489794 GPR37O15354 613 aa12.57□□□□□ -0.4
VPS26A-206ENST00000489794 PRIM1P49642 420 aaKnown RBP12.57□□□□□ -0.4
VPS26A-206ENST00000489794 PTGDRQ13258 359 aa12.57□□□□□ -0.4
VPS26A-206ENST00000489794 KRI1Q8N9T8 703 aaKnown RBP12.56□□□□□ -0.4
VPS26A-206ENST00000489794 C6orf132Q5T0Z8 1188 aa12.54□□□□□ -0.4
VPS26A-206ENST00000489794 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
VPS26A-206ENST00000489794 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
VPS26A-206ENST00000489794 MINK1Q8N4C8 1332 aaPredicted RBP12.53□□□□□ -0.4
VPS26A-206ENST00000489794 MAP2K5Q13163 448 aa12.52□□□□□ -0.41
VPS26A-206ENST00000489794 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.41
VPS26A-206ENST00000489794 KCNH8Q96L42 1107 aa12.52□□□□□ -0.41
VPS26A-206ENST00000489794 AK7Q96M32 723 aa12.52□□□□□ -0.41
VPS26A-206ENST00000489794 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
VPS26A-206ENST00000489794 PTPREP23469 700 aa12.5□□□□□ -0.41
VPS26A-206ENST00000489794 CDHR5Q9HBB8 845 aa12.5□□□□□ -0.41
VPS26A-206ENST00000489794 NPDC1Q9NQX5 325 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-206ENST00000489794 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
VPS26A-206ENST00000489794 PBX2P40425 430 aa12.47□□□□□ -0.41
VPS26A-206ENST00000489794 PPP1R3GB7ZBB8 358 aa12.46□□□□□ -0.41
VPS26A-206ENST00000489794 IRF6O14896 467 aa12.45□□□□□ -0.42
VPS26A-206ENST00000489794 ANKRD13DQ6ZTN6 518 aa12.44□□□□□ -0.42
VPS26A-206ENST00000489794 PRSS12P56730 875 aa12.42□□□□□ -0.42
VPS26A-206ENST00000489794 LSM11P83369 360 aaKnown RBP eCLIP12.41□□□□□ -0.42
VPS26A-206ENST00000489794 CCDC102AQ96A19 550 aa12.4□□□□□ -0.42
VPS26A-206ENST00000489794 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
VPS26A-206ENST00000489794 FECHP22830 423 aa12.39□□□□□ -0.43
VPS26A-206ENST00000489794 CDCA7LQ96GN5 454 aa12.39□□□□□ -0.43
VPS26A-206ENST00000489794 ARHGAP33O14559 1287 aa12.38□□□□□ -0.43
VPS26A-206ENST00000489794 TRIM66O15016 1216 aa12.38□□□□□ -0.43
VPS26A-206ENST00000489794 ONECUT3O60422 494 aaPredicted RBP12.38□□□□□ -0.43
VPS26A-206ENST00000489794 OATP04181 439 aa12.38□□□□□ -0.43
VPS26A-206ENST00000489794 PADI6Q6TGC4 694 aa12.38□□□□□ -0.43
VPS26A-206ENST00000489794 TTC13Q8NBP0 860 aa12.38□□□□□ -0.43
VPS26A-206ENST00000489794 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
VPS26A-206ENST00000489794 KCNK17Q96T54 332 aa12.38□□□□□ -0.43
VPS26A-206ENST00000489794 COL9A1P20849 921 aa12.37□□□□□ -0.43
VPS26A-206ENST00000489794 AMHR2Q16671 573 aa12.35□□□□□ -0.43
VPS26A-206ENST00000489794 AXIN2Q9Y2T1 843 aa12.35□□□□□ -0.43
VPS26A-206ENST00000489794 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
VPS26A-206ENST00000489794 PACS2Q86VP3 889 aa12.34□□□□□ -0.43
VPS26A-206ENST00000489794 SLC4A5Q9BY07 1137 aa12.34□□□□□ -0.43
VPS26A-206ENST00000489794 DAXXQ9UER7 740 aaPredicted RBP12.34□□□□□ -0.43
VPS26A-206ENST00000489794 TRIM6-TRIM34B2RNG4 842 aa12.33□□□□□ -0.44
VPS26A-206ENST00000489794 BRPF1P55201 1214 aaPredicted RBP12.33□□□□□ -0.44
VPS26A-206ENST00000489794 NEUROD2Q15784 382 aa12.33□□□□□ -0.44
VPS26A-206ENST00000489794 PDE4DQ08499 809 aa12.32□□□□□ -0.44
VPS26A-206ENST00000489794 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
VPS26A-206ENST00000489794 ADGRG1Q9Y653 693 aa12.32□□□□□ -0.44
VPS26A-206ENST00000489794 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
VPS26A-206ENST00000489794 ZBED2Q9BTP6 218 aa12.3□□□□□ -0.44
VPS26A-206ENST00000489794 METTL3Q86U44 580 aaKnown RBP12.29□□□□□ -0.44
VPS26A-206ENST00000489794 PSEN2P49810 448 aa12.28□□□□□ -0.44
VPS26A-206ENST00000489794 PXYLP1Q8TE99 480 aa12.28□□□□□ -0.44
VPS26A-206ENST00000489794 TSKSQ9UJT2 592 aa12.28□□□□□ -0.44
VPS26A-206ENST00000489794 CLCN1P35523 988 aa12.26□□□□□ -0.45
VPS26A-206ENST00000489794 TK2O00142 265 aa12.25□□□□□ -0.45
VPS26A-206ENST00000489794 TTLL12Q14166 644 aaPredicted RBP12.25□□□□□ -0.45
VPS26A-206ENST00000489794 ADGRD1Q6QNK2 874 aa12.25□□□□□ -0.45
VPS26A-206ENST00000489794 RABGEF1Q9UJ41 708 aa12.25□□□□□ -0.45
VPS26A-206ENST00000489794 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
VPS26A-206ENST00000489794 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
VPS26A-206ENST00000489794 TATDN2Q93075 761 aa12.24□□□□□ -0.45
VPS26A-206ENST00000489794 FAM198AQ9UFP1 575 aa12.24□□□□□ -0.45
VPS26A-206ENST00000489794 NUDT18Q6ZVK8 323 aa12.23□□□□□ -0.45
VPS26A-206ENST00000489794 PNMA3Q9UL41 463 aa12.23□□□□□ -0.45
VPS26A-206ENST00000489794 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
VPS26A-206ENST00000489794 EYA1Q99502 592 aa12.22□□□□□ -0.45
VPS26A-206ENST00000489794 KDM4CQ9H3R0 1056 aa12.22□□□□□ -0.45
VPS26A-206ENST00000489794 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
VPS26A-206ENST00000489794 KIAA1468Q9P260 1216 aa12.22□□□□□ -0.45
VPS26A-206ENST00000489794 FAM161AQ3B820 660 aa12.21□□□□□ -0.45
VPS26A-206ENST00000489794 PARP9Q8IXQ6 854 aa12.21□□□□□ -0.45
VPS26A-206ENST00000489794 VPS9D1Q9Y2B5 631 aa12.21□□□□□ -0.45
VPS26A-206ENST00000489794 DNAJB2P25686 324 aa12.2□□□□□ -0.46
VPS26A-206ENST00000489794 TMEM132AQ24JP5 1023 aa12.2□□□□□ -0.46
VPS26A-206ENST00000489794 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
VPS26A-206ENST00000489794 PHOX2BQ99453 314 aa12.19□□□□□ -0.46
VPS26A-206ENST00000489794 GPBP1L1Q9HC44 474 aaPredicted RBP12.19□□□□□ -0.46
VPS26A-206ENST00000489794 MDM2Q00987 491 aaPredicted RBP12.18□□□□□ -0.46
VPS26A-206ENST00000489794 LAPTM4BQ86VI4 370 aa12.18□□□□□ -0.46
VPS26A-206ENST00000489794 STAC3Q96MF2 364 aa12.18□□□□□ -0.46
VPS26A-206ENST00000489794 TMUB1Q9BVT8 246 aa12.18□□□□□ -0.46
VPS26A-206ENST00000489794 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
VPS26A-206ENST00000489794 GIGYF2Q6Y7W6 1299 aaKnown RBP12.17□□□□□ -0.46
VPS26A-206ENST00000489794 DDRGK1Q96HY6 314 aa12.17□□□□□ -0.46
VPS26A-206ENST00000489794 HRO43593 1189 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms