RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 DIP2CQ9Y2E4 1556 aa20.91■□□□□ 0.94
VPS26A-205ENST00000489656 ZEB1P37275 1124 aaPredicted RBP20.9■□□□□ 0.94
VPS26A-205ENST00000489656 IQGAP3Q86VI3 1631 aa20.89■□□□□ 0.93
VPS26A-205ENST00000489656 PZPP20742 1482 aa20.88■□□□□ 0.93
VPS26A-205ENST00000489656 DHX29Q7Z478 1369 aaKnown RBP20.86■□□□□ 0.93
VPS26A-205ENST00000489656 RNF17Q9BXT8 1623 aaKnown RBP20.86■□□□□ 0.93
VPS26A-205ENST00000489656 RAPGEF3O95398 923 aa20.86■□□□□ 0.93
VPS26A-205ENST00000489656 A2MP01023 1474 aa20.86■□□□□ 0.93
VPS26A-205ENST00000489656 REREQ9P2R6 1566 aa20.85■□□□□ 0.93
VPS26A-205ENST00000489656 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
VPS26A-205ENST00000489656 COL17A1Q9UMD9 1497 aaPredicted RBP20.83■□□□□ 0.93
VPS26A-205ENST00000489656 MROH1Q8NDA8 1641 aa20.82■□□□□ 0.92
VPS26A-205ENST00000489656 PRDM15P57071 1507 aaPredicted RBP20.81■□□□□ 0.92
VPS26A-205ENST00000489656 ARHGEF40Q8TER5 1519 aa20.81■□□□□ 0.92
VPS26A-205ENST00000489656 FAM135AQ9P2D6 1515 aa20.81■□□□□ 0.92
VPS26A-205ENST00000489656 VWDEQ8N2E2 1590 aa20.8■□□□□ 0.92
VPS26A-205ENST00000489656 MPHOSPH9Q99550 1183 aa20.8■□□□□ 0.92
VPS26A-205ENST00000489656 MYT1LQ9UL68 1186 aa20.79■□□□□ 0.92
VPS26A-205ENST00000489656 YEATS2Q9ULM3 1422 aa20.78■□□□□ 0.92
VPS26A-205ENST00000489656 NUP155O75694 1391 aa20.78■□□□□ 0.92
VPS26A-205ENST00000489656 TRHP20396 242 aaPredicted RBP20.78■□□□□ 0.92
VPS26A-205ENST00000489656 POTEDQ86YR6 584 aa20.77■□□□□ 0.92
VPS26A-205ENST00000489656 TET3O43151 1660 aa20.77■□□□□ 0.91
VPS26A-205ENST00000489656 ATP10AO60312 1499 aa20.75■□□□□ 0.91
VPS26A-205ENST00000489656 SLC4A1APQ9BWU0 796 aaKnown RBP20.74■□□□□ 0.91
VPS26A-205ENST00000489656 AGLP35573 1532 aa20.73■□□□□ 0.91
VPS26A-205ENST00000489656 CEP152O94986 1710 aa20.73■□□□□ 0.91
VPS26A-205ENST00000489656 ZC3H13Q5T200 1668 aaKnown RBP20.72■□□□□ 0.91
VPS26A-205ENST00000489656 E9PCH4 1651 aa20.71■□□□□ 0.91
VPS26A-205ENST00000489656 LMTK2Q8IWU2 1503 aa20.71■□□□□ 0.91
VPS26A-205ENST00000489656 SIGLEC1Q9BZZ2 1709 aa20.7■□□□□ 0.9
VPS26A-205ENST00000489656 KIF3BO15066 747 aa20.69■□□□□ 0.9
VPS26A-205ENST00000489656 KANK1Q14678 1352 aa20.69■□□□□ 0.9
VPS26A-205ENST00000489656 ANKRD30BQ9BXX2 1392 aa20.69■□□□□ 0.9
VPS26A-205ENST00000489656 SPHKAPQ2M3C7 1700 aa20.66■□□□□ 0.9
VPS26A-205ENST00000489656 EFCAB6Q5THR3 1501 aa20.65■□□□□ 0.9
VPS26A-205ENST00000489656 PKD2Q13563 968 aa20.65■□□□□ 0.9
VPS26A-205ENST00000489656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.89
VPS26A-205ENST00000489656 CAMSAP1Q5T5Y3 1602 aa20.64■□□□□ 0.89
VPS26A-205ENST00000489656 TIMELESSQ9UNS1 1208 aa20.63■□□□□ 0.89
VPS26A-205ENST00000489656 ABCC3O15438 1527 aa20.63■□□□□ 0.89
VPS26A-205ENST00000489656 RPRD2Q5VT52 1461 aaKnown RBP20.62■□□□□ 0.89
VPS26A-205ENST00000489656 SIN3AQ96ST3 1273 aa20.61■□□□□ 0.89
VPS26A-205ENST00000489656 TRPM2O94759 1503 aa20.57■□□□□ 0.88
VPS26A-205ENST00000489656 CFAP65Q6ZU64 1925 aaKnown RBP20.57■□□□□ 0.88
VPS26A-205ENST00000489656 PLA2R1Q13018 1463 aa20.56■□□□□ 0.88
VPS26A-205ENST00000489656 PTPRTO14522 1441 aa20.55■□□□□ 0.88
VPS26A-205ENST00000489656 CLTCQ00610 1675 aaKnown RBP20.54■□□□□ 0.88
VPS26A-205ENST00000489656 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
VPS26A-205ENST00000489656 GGT6Q6P531 493 aa20.53■□□□□ 0.88
VPS26A-205ENST00000489656 ARHGAP31Q2M1Z3 1444 aa20.53■□□□□ 0.88
VPS26A-205ENST00000489656 TONSLQ96HA7 1378 aa20.51■□□□□ 0.87
VPS26A-205ENST00000489656 KIF1BO60333 1816 aa20.5■□□□□ 0.87
VPS26A-205ENST00000489656 MROH2AA6NES4 1674 aa20.5■□□□□ 0.87
VPS26A-205ENST00000489656 CLTCL1P53675 1640 aa20.49■□□□□ 0.87
VPS26A-205ENST00000489656 PREX1Q8TCU6 1659 aa20.49■□□□□ 0.87
VPS26A-205ENST00000489656 CCDC144AA2RUR9 1427 aa20.49■□□□□ 0.87
VPS26A-205ENST00000489656 NPATQ14207 1427 aa20.49■□□□□ 0.87
VPS26A-205ENST00000489656 NEURL4Q96JN8 1562 aa20.49■□□□□ 0.87
VPS26A-205ENST00000489656 WASHC2CQ9Y4E1 1318 aa20.49■□□□□ 0.87
VPS26A-205ENST00000489656 PIK3C2BO00750 1634 aa20.45■□□□□ 0.87
VPS26A-205ENST00000489656 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
VPS26A-205ENST00000489656 FER1L4A9Z1Z3 1794 aa20.44■□□□□ 0.86
VPS26A-205ENST00000489656 NOS1P29475 1434 aa20.44■□□□□ 0.86
VPS26A-205ENST00000489656 SYNMO15061 1565 aa20.42■□□□□ 0.86
VPS26A-205ENST00000489656 PPP1R15AO75807 674 aaPredicted RBP20.42■□□□□ 0.86
VPS26A-205ENST00000489656 IFT172Q9UG01 1749 aa20.39■□□□□ 0.86
VPS26A-205ENST00000489656 SPATA31E1Q6ZUB1 1445 aa20.39■□□□□ 0.85
VPS26A-205ENST00000489656 SPATA31D1Q6ZQQ2 1576 aa20.38■□□□□ 0.85
VPS26A-205ENST00000489656 L3MBTL2Q969R5 705 aa20.38■□□□□ 0.85
VPS26A-205ENST00000489656 UGGT1Q9NYU2 1555 aa20.37■□□□□ 0.85
VPS26A-205ENST00000489656 ARID4BQ4LE39 1312 aaPredicted RBP20.36■□□□□ 0.85
VPS26A-205ENST00000489656 ERVK-7P63135 1459 aa20.36■□□□□ 0.85
VPS26A-205ENST00000489656 ADGRB3O60242 1522 aa20.35■□□□□ 0.85
VPS26A-205ENST00000489656 C3P01024 1663 aa20.35■□□□□ 0.85
VPS26A-205ENST00000489656 MYO5BQ9ULV0 1848 aa20.34■□□□□ 0.85
VPS26A-205ENST00000489656 ADAMTSL3P82987 1691 aa20.33■□□□□ 0.85
VPS26A-205ENST00000489656 MLECQ14165 292 aa20.33■□□□□ 0.85
VPS26A-205ENST00000489656 UHRF1BP1Q6BDS2 1440 aa20.33■□□□□ 0.84
VPS26A-205ENST00000489656 PPLO60437 1756 aa20.31■□□□□ 0.84
VPS26A-205ENST00000489656 PPP4R3CPQ6ZMV5 832 aa20.3■□□□□ 0.84
VPS26A-205ENST00000489656 ZMYM3Q14202 1370 aa20.3■□□□□ 0.84
VPS26A-205ENST00000489656 KDM5AP29375 1690 aaKnown RBP20.29■□□□□ 0.84
VPS26A-205ENST00000489656 MADDQ8WXG6 1647 aa20.29■□□□□ 0.84
VPS26A-205ENST00000489656 ESF1Q9H501 851 aaKnown RBP20.29■□□□□ 0.84
VPS26A-205ENST00000489656 TMEM131LA2VDJ0 1609 aa20.28■□□□□ 0.84
VPS26A-205ENST00000489656 TRPM1Q7Z4N2 1603 aa20.27■□□□□ 0.84
VPS26A-205ENST00000489656 RIMS1Q86UR5 1692 aaKnown RBP20.27■□□□□ 0.84
VPS26A-205ENST00000489656 SLC52A1Q9NWF4 448 aa20.27■□□□□ 0.84
VPS26A-205ENST00000489656 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
VPS26A-205ENST00000489656 KIAA1210Q9ULL0 1709 aa20.25■□□□□ 0.83
VPS26A-205ENST00000489656 STAC3Q96MF2 364 aa20.25■□□□□ 0.83
VPS26A-205ENST00000489656 MYOM2P54296 1465 aa20.24■□□□□ 0.83
VPS26A-205ENST00000489656 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
VPS26A-205ENST00000489656 PRAG1Q86YV5 1406 aa20.23■□□□□ 0.83
VPS26A-205ENST00000489656 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
VPS26A-205ENST00000489656 FBXO31Q5XUX0 539 aaPredicted RBP20.22■□□□□ 0.83
VPS26A-205ENST00000489656 LAMC1P11047 1609 aa20.22■□□□□ 0.83
VPS26A-205ENST00000489656 RGL3Q3MIN7 710 aa20.21■□□□□ 0.83
VPS26A-205ENST00000489656 DCAF11Q8TEB1 546 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms