RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 RALGAPBQ86X10 1494 aa12.26□□□□□ -0.45
CSMD2-209ENST00000489419 ABCC1P33527 1531 aa12.25□□□□□ -0.45
CSMD2-209ENST00000489419 RTEL1-TNFRSF6BF6WH68 1400 aa12.25□□□□□ -0.45
CSMD2-209ENST00000489419 C11orf95C9JLR9 678 aaPredicted RBP12.25□□□□□ -0.45
CSMD2-209ENST00000489419 IQGAP3Q86VI3 1631 aa12.24□□□□□ -0.45
CSMD2-209ENST00000489419 MAGI2Q86UL8 1455 aa12.24□□□□□ -0.45
CSMD2-209ENST00000489419 ATP10AO60312 1499 aa12.23□□□□□ -0.45
CSMD2-209ENST00000489419 KIF7Q2M1P5 1343 aa12.23□□□□□ -0.45
CSMD2-209ENST00000489419 USP47Q96K76 1375 aa12.23□□□□□ -0.45
CSMD2-209ENST00000489419 WDR7Q9Y4E6 1490 aa12.23□□□□□ -0.45
CSMD2-209ENST00000489419 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
CSMD2-209ENST00000489419 KDM5CP41229 1560 aa12.22□□□□□ -0.45
CSMD2-209ENST00000489419 CCDC144AA2RUR9 1427 aa12.21□□□□□ -0.45
CSMD2-209ENST00000489419 ROCK2O75116 1388 aaKnown RBP12.2□□□□□ -0.46
CSMD2-209ENST00000489419 PRKRIP1Q9H875 184 aaPredicted RBP12.2□□□□□ -0.46
CSMD2-209ENST00000489419 TRAPPC8Q9Y2L5 1435 aa12.19□□□□□ -0.46
CSMD2-209ENST00000489419 PLA2R1Q13018 1463 aa12.19□□□□□ -0.46
CSMD2-209ENST00000489419 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
CSMD2-209ENST00000489419 ABCA9Q8IUA7 1624 aa12.19□□□□□ -0.46
CSMD2-209ENST00000489419 SPAG9O60271 1321 aaKnown RBP12.18□□□□□ -0.46
CSMD2-209ENST00000489419 DCAF11Q8TEB1 546 aa12.18□□□□□ -0.46
CSMD2-209ENST00000489419 CARD11Q9BXL7 1154 aa12.18□□□□□ -0.46
CSMD2-209ENST00000489419 ZNF326Q5BKZ1 582 aaKnown RBP12.17□□□□□ -0.46
CSMD2-209ENST00000489419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
CSMD2-209ENST00000489419 PRAG1Q86YV5 1406 aa12.16□□□□□ -0.46
CSMD2-209ENST00000489419 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
CSMD2-209ENST00000489419 BCORL1Q5H9F3 1711 aa12.15□□□□□ -0.46
CSMD2-209ENST00000489419 STAC3Q96MF2 364 aa12.15□□□□□ -0.46
CSMD2-209ENST00000489419 ZFYVE16Q7Z3T8 1539 aa12.15□□□□□ -0.46
CSMD2-209ENST00000489419 GPRASP1Q5JY77 1395 aa12.15□□□□□ -0.46
CSMD2-209ENST00000489419 FANCAO15360 1455 aa12.15□□□□□ -0.46
CSMD2-209ENST00000489419 KDM2AQ9Y2K7 1162 aa12.15□□□□□ -0.47
CSMD2-209ENST00000489419 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
CSMD2-209ENST00000489419 ASXL2Q76L83 1435 aa12.14□□□□□ -0.47
CSMD2-209ENST00000489419 LAMC1P11047 1609 aa12.13□□□□□ -0.47
CSMD2-209ENST00000489419 DHX29Q7Z478 1369 aaKnown RBP12.13□□□□□ -0.47
CSMD2-209ENST00000489419 AFAP1Q8N556 730 aa12.13□□□□□ -0.47
CSMD2-209ENST00000489419 TRPM1Q7Z4N2 1603 aa12.13□□□□□ -0.47
CSMD2-209ENST00000489419 INO80Q9ULG1 1556 aaPredicted RBP12.12□□□□□ -0.47
CSMD2-209ENST00000489419 A2MP01023 1474 aa12.12□□□□□ -0.47
CSMD2-209ENST00000489419 DEPDC5O75140 1603 aa12.12□□□□□ -0.47
CSMD2-209ENST00000489419 EIF2AK4Q9P2K8 1649 aaKnown RBP12.12□□□□□ -0.47
CSMD2-209ENST00000489419 ATP7AQ04656 1500 aa12.11□□□□□ -0.47
CSMD2-209ENST00000489419 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
CSMD2-209ENST00000489419 KTN1Q86UP2 1357 aaKnown RBP12.11□□□□□ -0.47
CSMD2-209ENST00000489419 PTPRTO14522 1441 aa12.1□□□□□ -0.47
CSMD2-209ENST00000489419 ST20-MTHFSA0A0A6YYL1 179 aa12.1□□□□□ -0.47
CSMD2-209ENST00000489419 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
CSMD2-209ENST00000489419 ADGRL1O94910 1474 aa12.1□□□□□ -0.47
CSMD2-209ENST00000489419 KANK1Q14678 1352 aa12.1□□□□□ -0.47
CSMD2-209ENST00000489419 SCAPERQ9BY12 1400 aa12.1□□□□□ -0.47
CSMD2-209ENST00000489419 VWDEQ8N2E2 1590 aa12.1□□□□□ -0.47
CSMD2-209ENST00000489419 NEFLP07196 543 aa12.09□□□□□ -0.47
CSMD2-209ENST00000489419 MRS2Q9HD23 443 aa12.09□□□□□ -0.47
CSMD2-209ENST00000489419 TRPM2O94759 1503 aa12.08□□□□□ -0.47
CSMD2-209ENST00000489419 RGL3Q3MIN7 710 aa12.08□□□□□ -0.48
CSMD2-209ENST00000489419 TET3O43151 1660 aa12.08□□□□□ -0.48
CSMD2-209ENST00000489419 NEURL4Q96JN8 1562 aa12.08□□□□□ -0.48
CSMD2-209ENST00000489419 E9PCH4 1651 aa12.07□□□□□ -0.48
CSMD2-209ENST00000489419 PRDM15P57071 1507 aaPredicted RBP12.07□□□□□ -0.48
CSMD2-209ENST00000489419 CCDC184Q52MB2 194 aa12.07□□□□□ -0.48
CSMD2-209ENST00000489419 CFAP74Q9C0B2 1584 aa12.07□□□□□ -0.48
CSMD2-209ENST00000489419 ZNF518AQ6AHZ1 1483 aa12.06□□□□□ -0.48
CSMD2-209ENST00000489419 ZBED9Q6R2W3 1325 aa12.05□□□□□ -0.48
CSMD2-209ENST00000489419 FKBP8Q14318 412 aa12.05□□□□□ -0.48
CSMD2-209ENST00000489419 RALBP1Q15311 655 aa12.05□□□□□ -0.48
CSMD2-209ENST00000489419 PKNOX2Q96KN3 472 aa12.05□□□□□ -0.48
CSMD2-209ENST00000489419 SPHKAPQ2M3C7 1700 aa12.04□□□□□ -0.48
CSMD2-209ENST00000489419 NBPF1Q3BBV0 1214 aa12.04□□□□□ -0.48
CSMD2-209ENST00000489419 LMTK3Q96Q04 1460 aa12.04□□□□□ -0.48
CSMD2-209ENST00000489419 WASHC2CQ9Y4E1 1318 aa12.04□□□□□ -0.48
CSMD2-209ENST00000489419 CEP152O94986 1710 aa12.03□□□□□ -0.48
CSMD2-209ENST00000489419 KIF3BO15066 747 aa12.03□□□□□ -0.48
CSMD2-209ENST00000489419 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
CSMD2-209ENST00000489419 CD109Q6YHK3 1445 aa12.03□□□□□ -0.48
CSMD2-209ENST00000489419 RNF17Q9BXT8 1623 aaKnown RBP12.03□□□□□ -0.48
CSMD2-209ENST00000489419 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.48
CSMD2-209ENST00000489419 LMTK2Q8IWU2 1503 aa12.02□□□□□ -0.48
CSMD2-209ENST00000489419 ERICH6BQ5W0A0 696 aa12.02□□□□□ -0.49
CSMD2-209ENST00000489419 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.49
CSMD2-209ENST00000489419 MLH3Q9UHC1 1453 aa12.02□□□□□ -0.49
CSMD2-209ENST00000489419 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.49
CSMD2-209ENST00000489419 TESK2Q96S53 571 aa12.01□□□□□ -0.49
CSMD2-209ENST00000489419 MROH1Q8NDA8 1641 aa12.01□□□□□ -0.49
CSMD2-209ENST00000489419 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
CSMD2-209ENST00000489419 BRD4O60885 1362 aaPredicted RBP12□□□□□ -0.49
CSMD2-209ENST00000489419 MADDQ8WXG6 1647 aa12□□□□□ -0.49
CSMD2-209ENST00000489419 TMF1P82094 1093 aa12□□□□□ -0.49
CSMD2-209ENST00000489419 CLTCL1P53675 1640 aa12□□□□□ -0.49
CSMD2-209ENST00000489419 POGZQ7Z3K3 1410 aa12□□□□□ -0.49
CSMD2-209ENST00000489419 NEO1Q92859 1461 aa11.99□□□□□ -0.49
CSMD2-209ENST00000489419 MYBBP1AQ9BQG0 1328 aaKnown RBP11.99□□□□□ -0.49
CSMD2-209ENST00000489419 EFCAB6Q5THR3 1501 aa11.98□□□□□ -0.49
CSMD2-209ENST00000489419 PNISRQ8TF01 805 aaKnown RBP11.98□□□□□ -0.49
CSMD2-209ENST00000489419 KIAA1210Q9ULL0 1709 aa11.98□□□□□ -0.49
CSMD2-209ENST00000489419 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
CSMD2-209ENST00000489419 TMC1Q8TDI8 760 aa11.98□□□□□ -0.49
CSMD2-209ENST00000489419 PER1O15534 1290 aaPredicted RBP11.97□□□□□ -0.49
CSMD2-209ENST00000489419 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
CSMD2-209ENST00000489419 PARD3Q8TEW0 1356 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms