RNA–Protein interactions for RNA: ENST00000489333.1

GABRE-210, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-210ENST00000489333 DIP2CQ9Y2E4 1556 aa12.29□□□□□ -0.44
GABRE-210ENST00000489333 ABCA6Q8N139 1617 aa12.29□□□□□ -0.44
GABRE-210ENST00000489333 NCOA2Q15596 1464 aa12.28□□□□□ -0.44
GABRE-210ENST00000489333 ABCC1P33527 1531 aa12.27□□□□□ -0.44
GABRE-210ENST00000489333 ITGAEP38570 1179 aa12.27□□□□□ -0.45
GABRE-210ENST00000489333 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
GABRE-210ENST00000489333 CEBPAP49715 358 aaPredicted RBP12.26□□□□□ -0.45
GABRE-210ENST00000489333 GCC2Q8IWJ2 1684 aa12.26□□□□□ -0.45
GABRE-210ENST00000489333 MYT1Q01538 1121 aa12.25□□□□□ -0.45
GABRE-210ENST00000489333 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
GABRE-210ENST00000489333 TRAPPC8Q9Y2L5 1435 aa12.25□□□□□ -0.45
GABRE-210ENST00000489333 C3P01024 1663 aa12.24□□□□□ -0.45
GABRE-210ENST00000489333 REREQ9P2R6 1566 aa12.24□□□□□ -0.45
GABRE-210ENST00000489333 KIDINS220Q9ULH0 1771 aa12.24□□□□□ -0.45
GABRE-210ENST00000489333 SETD1BQ9UPS6 1966 aaKnown RBP12.23□□□□□ -0.45
GABRE-210ENST00000489333 MLH3Q9UHC1 1453 aa12.23□□□□□ -0.45
GABRE-210ENST00000489333 ZNF777Q9ULD5 760 aaPredicted RBP12.23□□□□□ -0.45
GABRE-210ENST00000489333 TONSLQ96HA7 1378 aa12.22□□□□□ -0.45
GABRE-210ENST00000489333 SAMD9LQ8IVG5 1584 aa12.22□□□□□ -0.45
GABRE-210ENST00000489333 STRCQ7RTU9 1775 aa12.21□□□□□ -0.45
GABRE-210ENST00000489333 PPP1R15AO75807 674 aaPredicted RBP12.21□□□□□ -0.45
GABRE-210ENST00000489333 SYCP2Q9BX26 1530 aa12.21□□□□□ -0.46
GABRE-210ENST00000489333 NAIPQ13075 1403 aa12.2□□□□□ -0.46
GABRE-210ENST00000489333 UHRF1BP1Q6BDS2 1440 aa12.2□□□□□ -0.46
GABRE-210ENST00000489333 ESF1Q9H501 851 aaKnown RBP12.2□□□□□ -0.46
GABRE-210ENST00000489333 ROCK1Q13464 1354 aa12.19□□□□□ -0.46
GABRE-210ENST00000489333 CCER2I3L3R5 266 aa12.19□□□□□ -0.46
GABRE-210ENST00000489333 YTHDC1Q96MU7 727 aaKnown RBP12.19□□□□□ -0.46
GABRE-210ENST00000489333 AGLP35573 1532 aa12.19□□□□□ -0.46
GABRE-210ENST00000489333 GPATCH8Q9UKJ3 1502 aaKnown RBP12.18□□□□□ -0.46
GABRE-210ENST00000489333 CAPN15O75808 1086 aa12.17□□□□□ -0.46
GABRE-210ENST00000489333 CERKQ8TCT0 537 aa12.17□□□□□ -0.46
GABRE-210ENST00000489333 SPAG9O60271 1321 aaKnown RBP12.15□□□□□ -0.46
GABRE-210ENST00000489333 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.46
GABRE-210ENST00000489333 MROH2AA6NES4 1674 aa12.15□□□□□ -0.46
GABRE-210ENST00000489333 CLTCQ00610 1675 aaKnown RBP12.15□□□□□ -0.46
GABRE-210ENST00000489333 ATP7AQ04656 1500 aa12.15□□□□□ -0.46
GABRE-210ENST00000489333 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
GABRE-210ENST00000489333 CFDP1Q9UEE9 299 aaPredicted RBP12.14□□□□□ -0.47
GABRE-210ENST00000489333 CNTLNQ9NXG0 1405 aa12.13□□□□□ -0.47
GABRE-210ENST00000489333 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
GABRE-210ENST00000489333 PLEKHH2Q8IVE3 1493 aa12.13□□□□□ -0.47
GABRE-210ENST00000489333 ANP32CO43423 234 aa12.12□□□□□ -0.47
GABRE-210ENST00000489333 ADGBQ8N7X0 1667 aa12.12□□□□□ -0.47
GABRE-210ENST00000489333 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
GABRE-210ENST00000489333 PLXNC1O60486 1568 aa12.11□□□□□ -0.47
GABRE-210ENST00000489333 PTPRKQ15262 1439 aa12.11□□□□□ -0.47
GABRE-210ENST00000489333 KIAA1107Q9UPP5 1409 aa12.11□□□□□ -0.47
GABRE-210ENST00000489333 A2MP01023 1474 aa12.1□□□□□ -0.47
GABRE-210ENST00000489333 CAMSAP1Q5T5Y3 1602 aa12.09□□□□□ -0.47
GABRE-210ENST00000489333 DSG3P32926 999 aa12.09□□□□□ -0.47
GABRE-210ENST00000489333 SIN3AQ96ST3 1273 aa12.09□□□□□ -0.47
GABRE-210ENST00000489333 MYO3AQ8NEV4 1616 aa12.08□□□□□ -0.48
GABRE-210ENST00000489333 ZMYM3Q14202 1370 aa12.08□□□□□ -0.48
GABRE-210ENST00000489333 PTPRTO14522 1441 aa12.08□□□□□ -0.48
GABRE-210ENST00000489333 ZNF644Q9H582 1327 aaPredicted RBP12.08□□□□□ -0.48
GABRE-210ENST00000489333 NPATQ14207 1427 aa12.07□□□□□ -0.48
GABRE-210ENST00000489333 NCOA1Q15788 1441 aa12.07□□□□□ -0.48
GABRE-210ENST00000489333 GGT6Q6P531 493 aa12.07□□□□□ -0.48
GABRE-210ENST00000489333 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
GABRE-210ENST00000489333 ZNF142P52746 1687 aaPredicted RBP12.06□□□□□ -0.48
GABRE-210ENST00000489333 DAPK1P53355 1430 aa12.06□□□□□ -0.48
GABRE-210ENST00000489333 MBD5Q9P267 1494 aa12.04□□□□□ -0.48
GABRE-210ENST00000489333 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
GABRE-210ENST00000489333 CEP170BQ9Y4F5 1589 aaPredicted RBP12.04□□□□□ -0.48
GABRE-210ENST00000489333 LTBP4Q8N2S1 1624 aa12.04□□□□□ -0.48
GABRE-210ENST00000489333 DDX10Q13206 875 aaKnown RBP12.03□□□□□ -0.48
GABRE-210ENST00000489333 NCKAP5LQ9HCH0 1330 aa12.03□□□□□ -0.48
GABRE-210ENST00000489333 ADGRL2O95490 1459 aa12.02□□□□□ -0.48
GABRE-210ENST00000489333 CAMSAP2Q08AD1 1489 aa12.02□□□□□ -0.48
GABRE-210ENST00000489333 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.49
GABRE-210ENST00000489333 MPHOSPH9Q99550 1183 aa12.01□□□□□ -0.49
GABRE-210ENST00000489333 RTEL1-TNFRSF6BF6WH68 1400 aa12.01□□□□□ -0.49
GABRE-210ENST00000489333 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
GABRE-210ENST00000489333 SHANK2Q9UPX8 1470 aa12.01□□□□□ -0.49
GABRE-210ENST00000489333 CROCC2H7BZ55 1655 aa12□□□□□ -0.49
GABRE-210ENST00000489333 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
GABRE-210ENST00000489333 EIF4G2P78344 907 aaKnown RBP eCLIP12□□□□□ -0.49
GABRE-210ENST00000489333 ABCC5O15440 1437 aa12□□□□□ -0.49
GABRE-210ENST00000489333 NEFLP07196 543 aa11.99□□□□□ -0.49
GABRE-210ENST00000489333 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
GABRE-210ENST00000489333 SUPT16HQ9Y5B9 1047 aaKnown RBP11.99□□□□□ -0.49
GABRE-210ENST00000489333 DHX29Q7Z478 1369 aaKnown RBP11.99□□□□□ -0.49
GABRE-210ENST00000489333 PLA2R1Q13018 1463 aa11.98□□□□□ -0.49
GABRE-210ENST00000489333 DISP3Q9P2K9 1392 aa11.98□□□□□ -0.49
GABRE-210ENST00000489333 KIF3BO15066 747 aa11.98□□□□□ -0.49
GABRE-210ENST00000489333 KDM5DQ9BY66 1539 aa11.97□□□□□ -0.49
GABRE-210ENST00000489333 IQSEC2Q5JU85 1478 aa11.97□□□□□ -0.49
GABRE-210ENST00000489333 ANKRD30BQ9BXX2 1392 aa11.97□□□□□ -0.49
GABRE-210ENST00000489333 ANKRD30AQ9BXX3 1397 aa11.97□□□□□ -0.49
GABRE-210ENST00000489333 ZNF335Q9H4Z2 1342 aaPredicted RBP11.97□□□□□ -0.49
GABRE-210ENST00000489333 ARHGEF5Q12774 1597 aa11.96□□□□□ -0.49
GABRE-210ENST00000489333 A2ML1A8K2U0 1454 aa11.96□□□□□ -0.49
GABRE-210ENST00000489333 ABCB7O75027 752 aa11.96□□□□□ -0.49
GABRE-210ENST00000489333 PKD2Q13563 968 aa11.96□□□□□ -0.49
GABRE-210ENST00000489333 RSPH4AQ5TD94 716 aa11.96□□□□□ -0.49
GABRE-210ENST00000489333 RRP7BPQ9NSQ0 103 aa11.96□□□□□ -0.49
GABRE-210ENST00000489333 SPATA31D1Q6ZQQ2 1576 aa11.96□□□□□ -0.5
GABRE-210ENST00000489333 ERICH6BQ5W0A0 696 aa11.95□□□□□ -0.5
GABRE-210ENST00000489333 TNRQ92752 1358 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms