RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
RPL13A-212ENST00000488946 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
RPL13A-212ENST00000488946 ZFYVE16Q7Z3T8 1539 aa19.93■□□□□ 0.78
RPL13A-212ENST00000488946 TRAPPC8Q9Y2L5 1435 aa19.93■□□□□ 0.78
RPL13A-212ENST00000488946 RTEL1-TNFRSF6BF6WH68 1400 aa19.91■□□□□ 0.78
RPL13A-212ENST00000488946 NBPF8Q3BBV2 869 aa19.91■□□□□ 0.78
RPL13A-212ENST00000488946 HSPA5P11021 654 aaKnown RBP19.9■□□□□ 0.78
RPL13A-212ENST00000488946 POLR1AO95602 1720 aaPredicted RBP19.89■□□□□ 0.78
RPL13A-212ENST00000488946 INO80Q9ULG1 1556 aaPredicted RBP19.89■□□□□ 0.78
RPL13A-212ENST00000488946 UHRF1BP1Q6BDS2 1440 aa19.89■□□□□ 0.77
RPL13A-212ENST00000488946 EIF4G2P78344 907 aaKnown RBP eCLIP19.88■□□□□ 0.77
RPL13A-212ENST00000488946 FANCAO15360 1455 aa19.88■□□□□ 0.77
RPL13A-212ENST00000488946 SPATA31E1Q6ZUB1 1445 aa19.87■□□□□ 0.77
RPL13A-212ENST00000488946 NEO1Q92859 1461 aa19.86■□□□□ 0.77
RPL13A-212ENST00000488946 CFAP74Q9C0B2 1584 aa19.86■□□□□ 0.77
RPL13A-212ENST00000488946 DEPDC5O75140 1603 aa19.84■□□□□ 0.77
RPL13A-212ENST00000488946 RALGAPBQ86X10 1494 aa19.83■□□□□ 0.76
RPL13A-212ENST00000488946 ATP7AQ04656 1500 aa19.83■□□□□ 0.76
RPL13A-212ENST00000488946 ATP10AO60312 1499 aa19.82■□□□□ 0.76
RPL13A-212ENST00000488946 WASHC2AQ641Q2 1341 aa19.81■□□□□ 0.76
RPL13A-212ENST00000488946 PLA2R1Q13018 1463 aa19.81■□□□□ 0.76
RPL13A-212ENST00000488946 ADGRL1O94910 1474 aa19.81■□□□□ 0.76
RPL13A-212ENST00000488946 KDM5CP41229 1560 aa19.8■□□□□ 0.76
RPL13A-212ENST00000488946 SPAG9O60271 1321 aaKnown RBP19.8■□□□□ 0.76
RPL13A-212ENST00000488946 EIF2AK4Q9P2K8 1649 aaKnown RBP19.79■□□□□ 0.76
RPL13A-212ENST00000488946 COL17A1Q9UMD9 1497 aaPredicted RBP19.78■□□□□ 0.76
RPL13A-212ENST00000488946 CCER2I3L3R5 266 aa19.77■□□□□ 0.76
RPL13A-212ENST00000488946 CCDC144AA2RUR9 1427 aa19.77■□□□□ 0.76
RPL13A-212ENST00000488946 CCDC7Q96M83 1385 aa19.77■□□□□ 0.75
RPL13A-212ENST00000488946 CNTLNQ9NXG0 1405 aa19.76■□□□□ 0.75
RPL13A-212ENST00000488946 ANP32CO43423 234 aa19.75■□□□□ 0.75
RPL13A-212ENST00000488946 VWDEQ8N2E2 1590 aa19.75■□□□□ 0.75
RPL13A-212ENST00000488946 SCAPERQ9BY12 1400 aa19.75■□□□□ 0.75
RPL13A-212ENST00000488946 AFAP1Q8N556 730 aa19.74■□□□□ 0.75
RPL13A-212ENST00000488946 E9PCH4 1651 aa19.74■□□□□ 0.75
RPL13A-212ENST00000488946 TET3O43151 1660 aa19.72■□□□□ 0.75
RPL13A-212ENST00000488946 USP47Q96K76 1375 aa19.72■□□□□ 0.75
RPL13A-212ENST00000488946 KIDINS220Q9ULH0 1771 aa19.72■□□□□ 0.75
RPL13A-212ENST00000488946 TRPM1Q7Z4N2 1603 aa19.72■□□□□ 0.75
RPL13A-212ENST00000488946 PRDM15P57071 1507 aaPredicted RBP19.72■□□□□ 0.75
RPL13A-212ENST00000488946 BCORL1Q5H9F3 1711 aa19.71■□□□□ 0.75
RPL13A-212ENST00000488946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.742e-18■□□□□ 8.9
RPL13A-212ENST00000488946 MROH1Q8NDA8 1641 aa19.7■□□□□ 0.74
RPL13A-212ENST00000488946 ZNF518AQ6AHZ1 1483 aa19.7■□□□□ 0.74
RPL13A-212ENST00000488946 C11orf95C9JLR9 678 aaPredicted RBP19.7■□□□□ 0.74
RPL13A-212ENST00000488946 RAPGEF3O95398 923 aa19.7■□□□□ 0.74
RPL13A-212ENST00000488946 TRPM2O94759 1503 aa19.69■□□□□ 0.74
RPL13A-212ENST00000488946 A2MP01023 1474 aa19.69■□□□□ 0.74
RPL13A-212ENST00000488946 PRAG1Q86YV5 1406 aa19.69■□□□□ 0.74
RPL13A-212ENST00000488946 LAMC1P11047 1609 aa19.69■□□□□ 0.74
RPL13A-212ENST00000488946 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
RPL13A-212ENST00000488946 RICTORQ6R327 1708 aa19.68■□□□□ 0.74
RPL13A-212ENST00000488946 KIF7Q2M1P5 1343 aa19.67■□□□□ 0.74
RPL13A-212ENST00000488946 POGZQ7Z3K3 1410 aa19.67■□□□□ 0.74
RPL13A-212ENST00000488946 DHX29Q7Z478 1369 aaKnown RBP19.66■□□□□ 0.74
RPL13A-212ENST00000488946 CEP152O94986 1710 aa19.65■□□□□ 0.74
RPL13A-212ENST00000488946 FRMPD1Q5SYB0 1578 aa19.65■□□□□ 0.74
RPL13A-212ENST00000488946 PTPRTO14522 1441 aa19.65■□□□□ 0.74
RPL13A-212ENST00000488946 ZNF326Q5BKZ1 582 aaKnown RBP19.65■□□□□ 0.74
RPL13A-212ENST00000488946 RNF17Q9BXT8 1623 aaKnown RBP19.65■□□□□ 0.74
RPL13A-212ENST00000488946 DCAF11Q8TEB1 546 aa19.63■□□□□ 0.73
RPL13A-212ENST00000488946 HECW2Q9P2P5 1572 aa19.63■□□□□ 0.73
RPL13A-212ENST00000488946 ARID4BQ4LE39 1312 aaPredicted RBP19.62■□□□□ 0.73
RPL13A-212ENST00000488946 MLH3Q9UHC1 1453 aa19.62■□□□□ 0.73
RPL13A-212ENST00000488946 GPRASP1Q5JY77 1395 aa19.62■□□□□ 0.73
RPL13A-212ENST00000488946 NEURL4Q96JN8 1562 aa19.61■□□□□ 0.73
RPL13A-212ENST00000488946 CLTCL1P53675 1640 aa19.61■□□□□ 0.73
RPL13A-212ENST00000488946 ZMYM4Q5VZL5 1548 aa19.6■□□□□ 0.73
RPL13A-212ENST00000488946 KANK1Q14678 1352 aa19.6■□□□□ 0.73
RPL13A-212ENST00000488946 LMTK2Q8IWU2 1503 aa19.6■□□□□ 0.73
RPL13A-212ENST00000488946 EFCAB6Q5THR3 1501 aa19.59■□□□□ 0.73
RPL13A-212ENST00000488946 CARD11Q9BXL7 1154 aa19.59■□□□□ 0.73
RPL13A-212ENST00000488946 KDM2AQ9Y2K7 1162 aa19.58■□□□□ 0.72
RPL13A-212ENST00000488946 ROCK2O75116 1388 aaKnown RBP19.57■□□□□ 0.72
RPL13A-212ENST00000488946 ABCA6Q8N139 1617 aa19.56■□□□□ 0.72
RPL13A-212ENST00000488946 MADDQ8WXG6 1647 aa19.56■□□□□ 0.72
RPL13A-212ENST00000488946 MYT1LQ9UL68 1186 aa19.55■□□□□ 0.72
RPL13A-212ENST00000488946 KIF3BO15066 747 aa19.53■□□□□ 0.72
RPL13A-212ENST00000488946 FKBP8Q14318 412 aa19.52■□□□□ 0.72
RPL13A-212ENST00000488946 BCANQ96GW7 911 aa19.52■□□□□ 0.72
RPL13A-212ENST00000488946 ARHGEF40Q8TER5 1519 aa19.52■□□□□ 0.72
RPL13A-212ENST00000488946 RGL3Q3MIN7 710 aa19.52■□□□□ 0.71
RPL13A-212ENST00000488946 PRKRIP1Q9H875 184 aaPredicted RBP19.51■□□□□ 0.71
RPL13A-212ENST00000488946 ANO8Q9HCE9 1232 aaPredicted RBP19.5■□□□□ 0.71
RPL13A-212ENST00000488946 YEATS2Q9ULM3 1422 aa19.5■□□□□ 0.71
RPL13A-212ENST00000488946 DIP2CQ9Y2E4 1556 aa19.49■□□□□ 0.71
RPL13A-212ENST00000488946 ST20-MTHFSA0A0A6YYL1 179 aa19.48■□□□□ 0.71
RPL13A-212ENST00000488946 IQGAP1P46940 1657 aa19.48■□□□□ 0.71
RPL13A-212ENST00000488946 KIAA1210Q9ULL0 1709 aa19.47■□□□□ 0.71
RPL13A-212ENST00000488946 IFT172Q9UG01 1749 aa19.47■□□□□ 0.71
RPL13A-212ENST00000488946 STAC3Q96MF2 364 aa19.47■□□□□ 0.71
RPL13A-212ENST00000488946 KIF1BO60333 1816 aa19.46■□□□□ 0.71
RPL13A-212ENST00000488946 NBPF1Q3BBV0 1214 aa19.45■□□□□ 0.7
RPL13A-212ENST00000488946 MYOM2P54296 1465 aa19.44■□□□□ 0.7
RPL13A-212ENST00000488946 UGGT1Q9NYU2 1555 aa19.44■□□□□ 0.7
RPL13A-212ENST00000488946 ABCC3O15438 1527 aa19.44■□□□□ 0.7
RPL13A-212ENST00000488946 MROH2AA6NES4 1674 aa19.43■□□□□ 0.7
RPL13A-212ENST00000488946 CAMSAP1Q5T5Y3 1602 aa19.41■□□□□ 0.7
RPL13A-212ENST00000488946 ADGRB3O60242 1522 aa19.41■□□□□ 0.7
RPL13A-212ENST00000488946 NEFLP07196 543 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms