RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 NCOA2Q15596 1464 aa9.71□□□□□ -0.86
HDLBP-243ENST00000488923 EPRSP07814 1512 aaKnown RBP9.71□□□□□ -0.86
HDLBP-243ENST00000488923 HS3ST6Q96QI5 342 aa9.7□□□□□ -0.86
HDLBP-243ENST00000488923 MIA2Q96PC5 1412 aa9.7□□□□□ -0.86
HDLBP-243ENST00000488923 ARHGEF11O15085 1522 aa9.69□□□□□ -0.86
HDLBP-243ENST00000488923 MKRN3Q13064 507 aaKnown RBP9.69□□□□□ -0.86
HDLBP-243ENST00000488923 FKBP8Q14318 412 aa9.69□□□□□ -0.86
HDLBP-243ENST00000488923 DISP1Q96F81 1524 aa9.69□□□□□ -0.86
HDLBP-243ENST00000488923 RAB3GAP2Q9H2M9 1393 aa9.69□□□□□ -0.86
HDLBP-243ENST00000488923 FAM205CA6NFA0 338 aa9.68□□□□□ -0.86
HDLBP-243ENST00000488923 ZNF316A6NFI3 1004 aaPredicted RBP9.68□□□□□ -0.86
HDLBP-243ENST00000488923 KRTAP3-3Q9BYR6 98 aa9.68□□□□□ -0.86
HDLBP-243ENST00000488923 KRTAP3-2Q9BYR7 98 aa9.68□□□□□ -0.86
HDLBP-243ENST00000488923 POTEB3A0JP26 581 aa9.67□□□□□ -0.86
HDLBP-243ENST00000488923 ITGAEP38570 1179 aa9.67□□□□□ -0.86
HDLBP-243ENST00000488923 POTEBQ6S5H4 581 aa9.67□□□□□ -0.86
HDLBP-243ENST00000488923 TIMELESSQ9UNS1 1208 aa9.67□□□□□ -0.86
HDLBP-243ENST00000488923 CEP170Q5SW79 1584 aa9.67□□□□□ -0.86
HDLBP-243ENST00000488923 TCOF1Q13428 1488 aaKnown RBP9.66□□□□□ -0.86
HDLBP-243ENST00000488923 AKNAQ7Z591 1439 aa9.65□□□□□ -0.86
HDLBP-243ENST00000488923 RAPGEF6Q8TEU7 1601 aa9.65□□□□□ -0.86
HDLBP-243ENST00000488923 ZNF467Q7Z7K2 595 aaPredicted RBP9.65□□□□□ -0.86
HDLBP-243ENST00000488923 JPH4Q96JJ6 628 aa9.65□□□□□ -0.86
HDLBP-243ENST00000488923 HFM1A2PYH4 1435 aa9.65□□□□□ -0.87
HDLBP-243ENST00000488923 LRRIQ1Q96JM4 1722 aa9.63□□□□□ -0.87
HDLBP-243ENST00000488923 NUP153P49790 1475 aaKnown RBP9.62□□□□□ -0.87
HDLBP-243ENST00000488923 DIEXFQ68CQ4 756 aaKnown RBP9.62□□□□□ -0.87
HDLBP-243ENST00000488923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.62□□□□□ -0.876e-17■□□□□ 8.8
HDLBP-243ENST00000488923 PTPN23Q9H3S7 1636 aa9.62□□□□□ -0.87
HDLBP-243ENST00000488923 TROQ12816 1431 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-243ENST00000488923 CDK13Q14004 1512 aaKnown RBP9.61□□□□□ -0.87
HDLBP-243ENST00000488923 MAGI3Q5TCQ9 1506 aa9.61□□□□□ -0.87
HDLBP-243ENST00000488923 UACAQ9BZF9 1416 aa9.59□□□□□ -0.87
HDLBP-243ENST00000488923 GSE1Q14687 1217 aa9.59□□□□□ -0.87
HDLBP-243ENST00000488923 G3V3G9 751 aa9.58□□□□□ -0.88
HDLBP-243ENST00000488923 ROCK1Q13464 1354 aa9.58□□□□□ -0.88
HDLBP-243ENST00000488923 NAIPQ13075 1403 aa9.57□□□□□ -0.88
HDLBP-243ENST00000488923 MAPKBP1O60336 1514 aa9.57□□□□□ -0.88
HDLBP-243ENST00000488923 ILDR1Q86SU0 546 aaPredicted RBP9.57□□□□□ -0.88
HDLBP-243ENST00000488923 ABCA8O94911 1581 aa9.57□□□□□ -0.88
HDLBP-243ENST00000488923 PLEKHD1A6NEE1 506 aa9.56□□□□□ -0.88
HDLBP-243ENST00000488923 ADCY10Q96PN6 1610 aa9.56□□□□□ -0.88
HDLBP-243ENST00000488923 PTPRGP23470 1445 aa9.56□□□□□ -0.88
HDLBP-243ENST00000488923 ITSN2Q9NZM3 1697 aa9.55□□□□□ -0.88
HDLBP-243ENST00000488923 PLB1Q6P1J6 1458 aa9.55□□□□□ -0.88
HDLBP-243ENST00000488923 PSEN1P49768 467 aa9.55□□□□□ -0.88
HDLBP-243ENST00000488923 PRG4Q92954 1404 aaPredicted RBP9.55□□□□□ -0.88
HDLBP-243ENST00000488923 CHRM1P11229 460 aaPredicted RBP9.54□□□□□ -0.88
HDLBP-243ENST00000488923 DPY19L2Q6NUT2 758 aa9.54□□□□□ -0.88
HDLBP-243ENST00000488923 ZNF710Q8N1W2 664 aa9.54□□□□□ -0.88
HDLBP-243ENST00000488923 PTPRKQ15262 1439 aa9.54□□□□□ -0.88
HDLBP-243ENST00000488923 GCC2Q8IWJ2 1684 aa9.53□□□□□ -0.88
HDLBP-243ENST00000488923 HOXB1P14653 301 aaPredicted RBP9.53□□□□□ -0.88
HDLBP-243ENST00000488923 FBXO3Q9UK99 471 aa9.53□□□□□ -0.88
HDLBP-243ENST00000488923 SHROOM2Q13796 1616 aa9.53□□□□□ -0.88
HDLBP-243ENST00000488923 HOXB3P14651 431 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-243ENST00000488923 DAPK1P53355 1430 aa9.52□□□□□ -0.89
HDLBP-243ENST00000488923 RNF166Q96A37 237 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-243ENST00000488923 CFDP1Q9UEE9 299 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-243ENST00000488923 KIF14Q15058 1648 aa9.52□□□□□ -0.89
HDLBP-243ENST00000488923 VASPP50552 380 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-243ENST00000488923 DOK7Q18PE1 504 aa9.51□□□□□ -0.89
HDLBP-243ENST00000488923 DNMT1P26358 1616 aaKnown RBP9.51□□□□□ -0.89
HDLBP-243ENST00000488923 ATP10BO94823 1461 aa9.51□□□□□ -0.89
HDLBP-243ENST00000488923 ERBB3P21860 1342 aa9.51□□□□□ -0.89
HDLBP-243ENST00000488923 GPATCH8Q9UKJ3 1502 aaKnown RBP9.51□□□□□ -0.89
HDLBP-243ENST00000488923 TONSLQ96HA7 1378 aa9.5□□□□□ -0.89
HDLBP-243ENST00000488923 ABCC5O15440 1437 aa9.49□□□□□ -0.89
HDLBP-243ENST00000488923 RIMBP2O15034 1052 aa9.49□□□□□ -0.89
HDLBP-243ENST00000488923 CENPBP07199 599 aaPredicted RBP9.49□□□□□ -0.89
HDLBP-243ENST00000488923 RSPH4AQ5TD94 716 aa9.49□□□□□ -0.89
HDLBP-243ENST00000488923 KLHL34Q8N239 644 aa9.49□□□□□ -0.89
HDLBP-243ENST00000488923 BOLA1Q9Y3E2 137 aa9.49□□□□□ -0.89
HDLBP-243ENST00000488923 CHD1O14646 1710 aa9.48□□□□□ -0.89
HDLBP-243ENST00000488923 ADGRL2O95490 1459 aa9.48□□□□□ -0.89
HDLBP-243ENST00000488923 CAMSAP2Q08AD1 1489 aa9.48□□□□□ -0.89
HDLBP-243ENST00000488923 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
HDLBP-243ENST00000488923 SHANK2Q9UPX8 1470 aa9.47□□□□□ -0.89
HDLBP-243ENST00000488923 PDAP1Q13442 181 aaKnown RBP9.47□□□□□ -0.89
HDLBP-243ENST00000488923 ANKRD30AQ9BXX3 1397 aa9.47□□□□□ -0.89
HDLBP-243ENST00000488923 ABCC10Q5T3U5 1492 aa9.47□□□□□ -0.89
HDLBP-243ENST00000488923 PPP1R15AO75807 674 aaPredicted RBP9.46□□□□□ -0.9
HDLBP-243ENST00000488923 RRP7BPQ9NSQ0 103 aa9.46□□□□□ -0.9
HDLBP-243ENST00000488923 UHRF1BP1LA0JNW5 1464 aa9.46□□□□□ -0.9
HDLBP-243ENST00000488923 CLASP1Q7Z460 1538 aa9.46□□□□□ -0.9
HDLBP-243ENST00000488923 ABCC2Q92887 1545 aa9.46□□□□□ -0.9
HDLBP-243ENST00000488923 NEUROD1Q13562 356 aa9.45□□□□□ -0.9
HDLBP-243ENST00000488923 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
HDLBP-243ENST00000488923 CABP2Q9NPB3 220 aa9.45□□□□□ -0.9
HDLBP-243ENST00000488923 CHIC2Q9UKJ5 165 aa9.45□□□□□ -0.9
HDLBP-243ENST00000488923 MYT1LQ9UL68 1186 aa9.45□□□□□ -0.9
HDLBP-243ENST00000488923 PTGER2P43116 358 aa9.44□□□□□ -0.9
HDLBP-243ENST00000488923 SIN3AQ96ST3 1273 aa9.44□□□□□ -0.9
HDLBP-243ENST00000488923 NCOA1Q15788 1441 aa9.44□□□□□ -0.9
HDLBP-243ENST00000488923 PLEKHH2Q8IVE3 1493 aa9.44□□□□□ -0.9
HDLBP-243ENST00000488923 ADGBQ8N7X0 1667 aa9.43□□□□□ -0.9
HDLBP-243ENST00000488923 ARHGEF5Q12774 1597 aa9.43□□□□□ -0.9
HDLBP-243ENST00000488923 TSPY4P0CV99 314 aa9.43□□□□□ -0.9
HDLBP-243ENST00000488923 TSPY10P0CW01 314 aa9.43□□□□□ -0.9
HDLBP-243ENST00000488923 MPHOSPH9Q99550 1183 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms