RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 TRIM52Q96A61 297 aa26.36■■□□□ 1.81
COL16A1-215ENST00000488897 A2MP01023 1474 aa26.36■■□□□ 1.81
COL16A1-215ENST00000488897 PLPPR3Q6T4P5 718 aa26.36■■□□□ 1.81
COL16A1-215ENST00000488897 ROCK1Q13464 1354 aa26.36■■□□□ 1.81
COL16A1-215ENST00000488897 HFM1A2PYH4 1435 aa26.35■■□□□ 1.81
COL16A1-215ENST00000488897 ATP10AO60312 1499 aa26.34■■□□□ 1.81
COL16A1-215ENST00000488897 DHX29Q7Z478 1369 aaKnown RBP26.34■■□□□ 1.81
COL16A1-215ENST00000488897 SETD5Q9C0A6 1442 aa26.34■■□□□ 1.81
COL16A1-215ENST00000488897 ARHGEF40Q8TER5 1519 aa26.31■■□□□ 1.8
COL16A1-215ENST00000488897 MAGI2Q86UL8 1455 aa26.31■■□□□ 1.8
COL16A1-215ENST00000488897 PLXNC1O60486 1568 aa26.3■■□□□ 1.8
COL16A1-215ENST00000488897 FOXD1Q16676 465 aa26.28■■□□□ 1.8
COL16A1-215ENST00000488897 DUOX2Q9NRD8 1548 aa26.27■■□□□ 1.8
COL16A1-215ENST00000488897 GCC2Q8IWJ2 1684 aa26.23■■□□□ 1.79
COL16A1-215ENST00000488897 NUP155O75694 1391 aa26.21■■□□□ 1.79
COL16A1-215ENST00000488897 ERBINQ96RT1 1412 aa26.18■■□□□ 1.78
COL16A1-215ENST00000488897 CEBPAP49715 358 aaPredicted RBP26.17■■□□□ 1.78
COL16A1-215ENST00000488897 WASHC2CQ9Y4E1 1318 aa26.16■■□□□ 1.78
COL16A1-215ENST00000488897 SLC4A1APQ9BWU0 796 aaKnown RBP26.14■■□□□ 1.78
COL16A1-215ENST00000488897 MROH1Q8NDA8 1641 aa26.12■■□□□ 1.77
COL16A1-215ENST00000488897 MPHOSPH9Q99550 1183 aa26.11■■□□□ 1.77
COL16A1-215ENST00000488897 CFAP65Q6ZU64 1925 aaKnown RBP26.1■■□□□ 1.77
COL16A1-215ENST00000488897 PKD2Q13563 968 aa26.08■■□□□ 1.77
COL16A1-215ENST00000488897 FBXO31Q5XUX0 539 aaPredicted RBP26.08■■□□□ 1.77
COL16A1-215ENST00000488897 ESF1Q9H501 851 aaKnown RBP26.06■■□□□ 1.76
COL16A1-215ENST00000488897 PZPP20742 1482 aa26.06■■□□□ 1.76
COL16A1-215ENST00000488897 REREQ9P2R6 1566 aa26.05■■□□□ 1.76
COL16A1-215ENST00000488897 KDM4FA0A1W2PPD8 638 aa26.05■■□□□ 1.76
COL16A1-215ENST00000488897 CEP152O94986 1710 aa26.05■■□□□ 1.76
COL16A1-215ENST00000488897 AGLP35573 1532 aa26.05■■□□□ 1.76
COL16A1-215ENST00000488897 EIF2AK4Q9P2K8 1649 aaKnown RBP26.03■■□□□ 1.76
COL16A1-215ENST00000488897 FAM135AQ9P2D6 1515 aa26.02■■□□□ 1.76
COL16A1-215ENST00000488897 CLTCQ00610 1675 aaKnown RBP26.01■■□□□ 1.75
COL16A1-215ENST00000488897 DEPDC5O75140 1603 aa26.01■■□□□ 1.75
COL16A1-215ENST00000488897 UNC13BO14795 1591 aa26.01■■□□□ 1.75
COL16A1-215ENST00000488897 KANK1Q14678 1352 aa26■■□□□ 1.75
COL16A1-215ENST00000488897 BCORL1Q5H9F3 1711 aa26■■□□□ 1.75
COL16A1-215ENST00000488897 RNF17Q9BXT8 1623 aaKnown RBP26■■□□□ 1.75
COL16A1-215ENST00000488897 PRDM15P57071 1507 aaPredicted RBP25.99■■□□□ 1.75
COL16A1-215ENST00000488897 MADDQ8WXG6 1647 aa25.99■■□□□ 1.75
COL16A1-215ENST00000488897 TIMELESSQ9UNS1 1208 aa25.98■■□□□ 1.75
COL16A1-215ENST00000488897 ABCC3O15438 1527 aa25.97■■□□□ 1.75
COL16A1-215ENST00000488897 SIN3AQ96ST3 1273 aa25.97■■□□□ 1.75
COL16A1-215ENST00000488897 ZMYM3Q14202 1370 aa25.96■■□□□ 1.75
COL16A1-215ENST00000488897 RIMS1Q86UR5 1692 aaKnown RBP25.92■■□□□ 1.74
COL16A1-215ENST00000488897 NPATQ14207 1427 aa25.92■■□□□ 1.74
COL16A1-215ENST00000488897 VWDEQ8N2E2 1590 aa25.92■■□□□ 1.74
COL16A1-215ENST00000488897 IQGAP3Q86VI3 1631 aa25.92■■□□□ 1.74
COL16A1-215ENST00000488897 FER1L4A9Z1Z3 1794 aa25.92■■□□□ 1.74
COL16A1-215ENST00000488897 KDM5DQ9BY66 1539 aa25.91■■□□□ 1.74
COL16A1-215ENST00000488897 SENP3Q9H4L4 574 aaPredicted RBP25.9■■□□□ 1.74
COL16A1-215ENST00000488897 E9PCH4 1651 aa25.89■■□□□ 1.74
COL16A1-215ENST00000488897 ADAMTSL3P82987 1691 aa25.88■■□□□ 1.73
COL16A1-215ENST00000488897 CAMSAP1Q5T5Y3 1602 aa25.87■■□□□ 1.73
COL16A1-215ENST00000488897 UGGT1Q9NYU2 1555 aa25.87■■□□□ 1.73
COL16A1-215ENST00000488897 PLA2R1Q13018 1463 aa25.83■■□□□ 1.73
COL16A1-215ENST00000488897 EFCAB6Q5THR3 1501 aa25.83■■□□□ 1.73
COL16A1-215ENST00000488897 CHGAP10645 457 aaKnown RBP25.82■■□□□ 1.72
COL16A1-215ENST00000488897 TET3O43151 1660 aa25.82■■□□□ 1.72
COL16A1-215ENST00000488897 PPP6R1Q9UPN7 881 aa25.82■■□□□ 1.72
COL16A1-215ENST00000488897 C3P01024 1663 aa25.81■■□□□ 1.72
COL16A1-215ENST00000488897 PTPRMP28827 1452 aa25.8■■□□□ 1.72
COL16A1-215ENST00000488897 MYT1Q01538 1121 aa25.8■■□□□ 1.72
COL16A1-215ENST00000488897 RGL3Q3MIN7 710 aa25.79■■□□□ 1.72
COL16A1-215ENST00000488897 LMTK2Q8IWU2 1503 aa25.79■■□□□ 1.72
COL16A1-215ENST00000488897 SUPT16HQ9Y5B9 1047 aaKnown RBP25.78■■□□□ 1.72
COL16A1-215ENST00000488897 IDI1Q13907 227 aa25.78■■□□□ 1.72
COL16A1-215ENST00000488897 ANKRD30BQ9BXX2 1392 aa25.77■■□□□ 1.72
COL16A1-215ENST00000488897 NUTM2DQ5VT03 806 aaPredicted RBP25.77■■□□□ 1.72
COL16A1-215ENST00000488897 PPP1R15AO75807 674 aaPredicted RBP25.76■■□□□ 1.71
COL16A1-215ENST00000488897 ZC3H13Q5T200 1668 aaKnown RBP25.75■■□□□ 1.71
COL16A1-215ENST00000488897 CNTLNQ9NXG0 1405 aa25.73■■□□□ 1.71
COL16A1-215ENST00000488897 ERVK-7P63135 1459 aa25.72■■□□□ 1.71
COL16A1-215ENST00000488897 PREX1Q8TCU6 1659 aa25.72■■□□□ 1.71
COL16A1-215ENST00000488897 SYNMO15061 1565 aa25.72■■□□□ 1.71
COL16A1-215ENST00000488897 DDX10Q13206 875 aaKnown RBP25.72■■□□□ 1.71
COL16A1-215ENST00000488897 ARHGAP31Q2M1Z3 1444 aa25.7■■□□□ 1.7
COL16A1-215ENST00000488897 NOS1P29475 1434 aa25.69■■□□□ 1.7
COL16A1-215ENST00000488897 TNRQ92752 1358 aa25.68■■□□□ 1.7
COL16A1-215ENST00000488897 SPHKAPQ2M3C7 1700 aa25.68■■□□□ 1.7
COL16A1-215ENST00000488897 PTPRTO14522 1441 aa25.66■■□□□ 1.7
COL16A1-215ENST00000488897 STAG3Q9UJ98 1225 aa25.66■■□□□ 1.7
COL16A1-215ENST00000488897 CCDC144AA2RUR9 1427 aa25.66■■□□□ 1.7
COL16A1-215ENST00000488897 CLTCL1P53675 1640 aa25.66■■□□□ 1.7
COL16A1-215ENST00000488897 MROH2AA6NES4 1674 aa25.65■■□□□ 1.7
COL16A1-215ENST00000488897 HSPA2P54652 639 aa25.65■■□□□ 1.7
COL16A1-215ENST00000488897 KDM2AQ9Y2K7 1162 aa25.64■■□□□ 1.7
COL16A1-215ENST00000488897 RPRD2Q5VT52 1461 aaKnown RBP25.64■■□□□ 1.69
COL16A1-215ENST00000488897 ZNF326Q5BKZ1 582 aaKnown RBP25.64■■□□□ 1.69
COL16A1-215ENST00000488897 TONSLQ96HA7 1378 aa25.63■■□□□ 1.69
COL16A1-215ENST00000488897 SPATA31D1Q6ZQQ2 1576 aa25.62■■□□□ 1.69
COL16A1-215ENST00000488897 TRPM2O94759 1503 aa25.6■■□□□ 1.69
COL16A1-215ENST00000488897 CCER2I3L3R5 266 aa25.58■■□□□ 1.69
COL16A1-215ENST00000488897 PIK3C2BO00750 1634 aa25.57■■□□□ 1.68
COL16A1-215ENST00000488897 L3MBTL2Q969R5 705 aa25.57■■□□□ 1.68
COL16A1-215ENST00000488897 MYO5BQ9ULV0 1848 aa25.57■■□□□ 1.68
COL16A1-215ENST00000488897 SLC52A1Q9NWF4 448 aa25.56■■□□□ 1.68
COL16A1-215ENST00000488897 DCAF11Q8TEB1 546 aa25.55■■□□□ 1.68
COL16A1-215ENST00000488897 ANP32CO43423 234 aa25.54■■□□□ 1.68
COL16A1-215ENST00000488897 MYO3AQ8NEV4 1616 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms