RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 PTPN23Q9H3S7 1636 aa16.88■□□□□ 0.29
NUP98-212ENST00000488828 RTEL1-TNFRSF6BF6WH68 1400 aa16.87■□□□□ 0.29
NUP98-212ENST00000488828 A2MP01023 1474 aa16.86■□□□□ 0.29
NUP98-212ENST00000488828 ITGAEP38570 1179 aa16.86■□□□□ 0.29
NUP98-212ENST00000488828 BCORL1Q5H9F3 1711 aa16.86■□□□□ 0.29
NUP98-212ENST00000488828 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
NUP98-212ENST00000488828 KIF3BO15066 747 aa16.85■□□□□ 0.29
NUP98-212ENST00000488828 RRP7BPQ9NSQ0 103 aa16.85■□□□□ 0.29
NUP98-212ENST00000488828 INO80Q9ULG1 1556 aaPredicted RBP16.84■□□□□ 0.29
NUP98-212ENST00000488828 SIGLEC1Q9BZZ2 1709 aa16.84■□□□□ 0.29
NUP98-212ENST00000488828 DHX29Q7Z478 1369 aaKnown RBP16.83■□□□□ 0.28
NUP98-212ENST00000488828 ADAMTSL3P82987 1691 aa16.82■□□□□ 0.28
NUP98-212ENST00000488828 PTPRMP28827 1452 aa16.82■□□□□ 0.28
NUP98-212ENST00000488828 ABCC5O15440 1437 aa16.82■□□□□ 0.28
NUP98-212ENST00000488828 MADDQ8WXG6 1647 aa16.81■□□□□ 0.28
NUP98-212ENST00000488828 TCOF1Q13428 1488 aaKnown RBP16.81■□□□□ 0.28
NUP98-212ENST00000488828 CEBPAP49715 358 aaPredicted RBP16.81■□□□□ 0.28
NUP98-212ENST00000488828 REREQ9P2R6 1566 aa16.81■□□□□ 0.28
NUP98-212ENST00000488828 DAPK1P53355 1430 aa16.8■□□□□ 0.28
NUP98-212ENST00000488828 AGLP35573 1532 aa16.8■□□□□ 0.28
NUP98-212ENST00000488828 POLA2Q14181 598 aa16.79■□□□□ 0.28
NUP98-212ENST00000488828 RIMS1Q86UR5 1692 aaKnown RBP16.78■□□□□ 0.28
NUP98-212ENST00000488828 ADGBQ8N7X0 1667 aa16.78■□□□□ 0.28
NUP98-212ENST00000488828 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.28
NUP98-212ENST00000488828 KIF15Q9NS87 1388 aa16.76■□□□□ 0.27
NUP98-212ENST00000488828 WASHC2CQ9Y4E1 1318 aa16.75■□□□□ 0.27
NUP98-212ENST00000488828 FER1L4A9Z1Z3 1794 aa16.75■□□□□ 0.27
NUP98-212ENST00000488828 DNMT1P26358 1616 aaKnown RBP16.74■□□□□ 0.27
NUP98-212ENST00000488828 MAST1Q9Y2H9 1570 aa16.74■□□□□ 0.27
NUP98-212ENST00000488828 SHANK2Q9UPX8 1470 aa16.73■□□□□ 0.27
NUP98-212ENST00000488828 PLXNC1O60486 1568 aa16.72■□□□□ 0.27
NUP98-212ENST00000488828 CNTLNQ9NXG0 1405 aa16.71■□□□□ 0.27
NUP98-212ENST00000488828 ZMYM3Q14202 1370 aa16.71■□□□□ 0.27
NUP98-212ENST00000488828 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
NUP98-212ENST00000488828 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
NUP98-212ENST00000488828 CROCC2H7BZ55 1655 aa16.69■□□□□ 0.26
NUP98-212ENST00000488828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.67■□□□□ 0.26
NUP98-212ENST00000488828 PTPRKQ15262 1439 aa16.66■□□□□ 0.26
NUP98-212ENST00000488828 RRBP1Q9P2E9 1410 aaKnown RBP16.65■□□□□ 0.26
NUP98-212ENST00000488828 KANK1Q14678 1352 aa16.64■□□□□ 0.26
NUP98-212ENST00000488828 ERBINQ96RT1 1412 aa16.64■□□□□ 0.25
NUP98-212ENST00000488828 HSPA2P54652 639 aa16.64■□□□□ 0.25
NUP98-212ENST00000488828 CLTCQ00610 1675 aaKnown RBP16.64■□□□□ 0.25
NUP98-212ENST00000488828 ANKRD50Q9ULJ7 1429 aa16.62■□□□□ 0.25
NUP98-212ENST00000488828 ADGRL2O95490 1459 aa16.62■□□□□ 0.25
NUP98-212ENST00000488828 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
NUP98-212ENST00000488828 ROCK1Q13464 1354 aa16.62■□□□□ 0.25
NUP98-212ENST00000488828 C3P01024 1663 aa16.6■□□□□ 0.25
NUP98-212ENST00000488828 KDM5DQ9BY66 1539 aa16.6■□□□□ 0.25
NUP98-212ENST00000488828 EIF2AK4Q9P2K8 1649 aaKnown RBP16.59■□□□□ 0.25
NUP98-212ENST00000488828 UHRF1BP1Q6BDS2 1440 aa16.59■□□□□ 0.25
NUP98-212ENST00000488828 MROH2AA6NES4 1674 aa16.57■□□□□ 0.24
NUP98-212ENST00000488828 NPATQ14207 1427 aa16.56■□□□□ 0.24
NUP98-212ENST00000488828 RNF17Q9BXT8 1623 aaKnown RBP16.56■□□□□ 0.24
NUP98-212ENST00000488828 LMTK3Q96Q04 1460 aa16.55■□□□□ 0.24
NUP98-212ENST00000488828 SETD1BQ9UPS6 1966 aaKnown RBP16.55■□□□□ 0.24
NUP98-212ENST00000488828 ABCC3O15438 1527 aa16.55■□□□□ 0.24
NUP98-212ENST00000488828 TNRQ92752 1358 aa16.53■□□□□ 0.24
NUP98-212ENST00000488828 TRIM52Q96A61 297 aa16.53■□□□□ 0.24
NUP98-212ENST00000488828 FAM135AQ9P2D6 1515 aa16.53■□□□□ 0.24
NUP98-212ENST00000488828 NUP155O75694 1391 aa16.52■□□□□ 0.24
NUP98-212ENST00000488828 PZPP20742 1482 aa16.52■□□□□ 0.23
NUP98-212ENST00000488828 PREX1Q8TCU6 1659 aa16.52■□□□□ 0.23
NUP98-212ENST00000488828 MROH1Q8NDA8 1641 aa16.51■□□□□ 0.23
NUP98-212ENST00000488828 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
NUP98-212ENST00000488828 CEP152O94986 1710 aa16.49■□□□□ 0.23
NUP98-212ENST00000488828 ZC3H13Q5T200 1668 aaKnown RBP16.49■□□□□ 0.23
NUP98-212ENST00000488828 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
NUP98-212ENST00000488828 ZBTB12Q9Y330 459 aaPredicted RBP16.48■□□□□ 0.23
NUP98-212ENST00000488828 CFAP65Q6ZU64 1925 aaKnown RBP16.47■□□□□ 0.23
NUP98-212ENST00000488828 NAIPQ13075 1403 aa16.47■□□□□ 0.23
NUP98-212ENST00000488828 THEMISQ8N1K5 641 aaPredicted RBP16.47■□□□□ 0.23
NUP98-212ENST00000488828 DEPDC5O75140 1603 aa16.47■□□□□ 0.23
NUP98-212ENST00000488828 CAMSAP1Q5T5Y3 1602 aa16.46■□□□□ 0.23
NUP98-212ENST00000488828 HFM1A2PYH4 1435 aa16.45■□□□□ 0.22
NUP98-212ENST00000488828 ARHGAP31Q2M1Z3 1444 aa16.45■□□□□ 0.22
NUP98-212ENST00000488828 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
NUP98-212ENST00000488828 ERVK-7P63135 1459 aa16.43■□□□□ 0.22
NUP98-212ENST00000488828 A2ML1A8K2U0 1454 aa16.42■□□□□ 0.22
NUP98-212ENST00000488828 MYO3AQ8NEV4 1616 aa16.42■□□□□ 0.22
NUP98-212ENST00000488828 LMTK2Q8IWU2 1503 aa16.42■□□□□ 0.22
NUP98-212ENST00000488828 VWDEQ8N2E2 1590 aa16.42■□□□□ 0.22
NUP98-212ENST00000488828 NLRP1Q9C000 1473 aa16.42■□□□□ 0.22
NUP98-212ENST00000488828 CHGAP10645 457 aaKnown RBP16.41■□□□□ 0.22
NUP98-212ENST00000488828 IDI1Q13907 227 aa16.41■□□□□ 0.22
NUP98-212ENST00000488828 CEP170BQ9Y4F5 1589 aaPredicted RBP16.41■□□□□ 0.22
NUP98-212ENST00000488828 UNC13BO14795 1591 aa16.4■□□□□ 0.22
NUP98-212ENST00000488828 ANKLE2Q86XL3 938 aa16.4■□□□□ 0.22
NUP98-212ENST00000488828 SPATA31D1Q6ZQQ2 1576 aa16.39■□□□□ 0.21
NUP98-212ENST00000488828 PKD2Q13563 968 aa16.39■□□□□ 0.21
NUP98-212ENST00000488828 SLC52A1Q9NWF4 448 aa16.39■□□□□ 0.21
NUP98-212ENST00000488828 EFCAB6Q5THR3 1501 aa16.38■□□□□ 0.21
NUP98-212ENST00000488828 UGGT1Q9NYU2 1555 aa16.38■□□□□ 0.21
NUP98-212ENST00000488828 GCC2Q8IWJ2 1684 aa16.37■□□□□ 0.21
NUP98-212ENST00000488828 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
NUP98-212ENST00000488828 EID1Q9Y6B2 187 aa16.36■□□□□ 0.21
NUP98-212ENST00000488828 TET3O43151 1660 aa16.36■□□□□ 0.21
NUP98-212ENST00000488828 RPRD2Q5VT52 1461 aaKnown RBP16.35■□□□□ 0.21
NUP98-212ENST00000488828 IQGAP3Q86VI3 1631 aa16.35■□□□□ 0.21
NUP98-212ENST00000488828 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms