RNA–Protein interactions for RNA: ENST00000488741.5

CREM-238, Transcript of cAMP responsive element modulator, human

TSL 2 BASIC

Gene CREM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-238	ENST00000488741	CCDC18	Q5T9S5	1454 aa		7.02	□□□□□ -1.29
CREM-238	ENST00000488741	HFM1	A2PYH4	1435 aa		7.01	□□□□□ -1.29
CREM-238	ENST00000488741	PTPN23	Q9H3S7	1636 aa		7.01	□□□□□ -1.29
CREM-238	ENST00000488741	FGD5	Q6ZNL6	1462 aa		7.01	□□□□□ -1.29
CREM-238	ENST00000488741	IGF1R	P08069	1367 aa		7.01	□□□□□ -1.29
CREM-238	ENST00000488741	CARMIL1	Q5VZK9	1371 aa		7.01	□□□□□ -1.29
CREM-238	ENST00000488741	NEUROD2	Q15784	382 aa		7.01	□□□□□ -1.29
CREM-238	ENST00000488741	C14orf37	Q86TY3	774 aa		7.01	□□□□□ -1.29
CREM-238	ENST00000488741	CASKIN1	Q8WXD9	1431 aa		7.01	□□□□□ -1.29
CREM-238	ENST00000488741	CNTLN	Q9NXG0	1405 aa		7.01	□□□□□ -1.29
CREM-238	ENST00000488741	ZRANB1	Q9UGI0	708 aa		7	□□□□□ -1.29
CREM-238	ENST00000488741	TRPC6	Q9Y210	931 aa		7	□□□□□ -1.29
CREM-238	ENST00000488741	NOP58	Q9Y2X3	529 aa	Known RBP	7	□□□□□ -1.29
CREM-238	ENST00000488741	FGD6	Q6ZV73	1430 aa		7	□□□□□ -1.29
CREM-238	ENST00000488741	ZBED9	Q6R2W3	1325 aa		7	□□□□□ -1.29
CREM-238	ENST00000488741	KDM5B	Q9UGL1	1544 aa		6.99	□□□□□ -1.29
CREM-238	ENST00000488741	THOC2	Q8NI27	1593 aa	Known RBP	6.99	□□□□□ -1.29
CREM-238	ENST00000488741	HECW1	Q76N89	1606 aa		6.98	□□□□□ -1.29
CREM-238	ENST00000488741	FMN1	Q68DA7	1419 aa		6.98	□□□□□ -1.29
CREM-238	ENST00000488741	POLR1A	O95602	1720 aa	Predicted RBP	6.98	□□□□□ -1.29
CREM-238	ENST00000488741	ABCA5	Q8WWZ7	1642 aa		6.98	□□□□□ -1.29
CREM-238	ENST00000488741	PDE4A	P27815	886 aa		6.97	□□□□□ -1.29
CREM-238	ENST00000488741	AKNA	Q7Z591	1439 aa		6.97	□□□□□ -1.29
CREM-238	ENST00000488741	CC2D2A	Q9P2K1	1620 aa		6.97	□□□□□ -1.29
CREM-238	ENST00000488741	GCC2	Q8IWJ2	1684 aa		6.96	□□□□□ -1.29
CREM-238	ENST00000488741	CTTNBP2	Q8WZ74	1663 aa		6.96	□□□□□ -1.29
CREM-238	ENST00000488741	ANP32A	P39687	249 aa	Known RBP	6.96	□□□□□ -1.3
CREM-238	ENST00000488741	EIF4G2	P78344	907 aa	Known RBP eCLIP	6.96	□□□□□ -1.3
CREM-238	ENST00000488741	TMEM106C	Q9BVX2	250 aa		6.96	□□□□□ -1.3
CREM-238	ENST00000488741	CUL7	Q14999	1698 aa		6.96	□□□□□ -1.3
CREM-238	ENST00000488741	NAIP	Q13075	1403 aa		6.95	□□□□□ -1.3
CREM-238	ENST00000488741	CD44	P16070	742 aa	Known RBP	6.95	□□□□□ -1.3
CREM-238	ENST00000488741	MFSD10	Q14728	455 aa		6.95	□□□□□ -1.3
CREM-238	ENST00000488741	RTL5	Q5HYW3	569 aa	Predicted RBP	6.95	□□□□□ -1.3
CREM-238	ENST00000488741	DDX27	Q96GQ7	796 aa	Known RBP	6.95	□□□□□ -1.3
CREM-238	ENST00000488741	HIRIP3	Q9BW71	556 aa	Predicted RBP	6.95	□□□□□ -1.3
CREM-238	ENST00000488741	CRISPLD2	Q9H0B8	497 aa		6.95	□□□□□ -1.3
CREM-238	ENST00000488741	SUPT6H	Q7KZ85	1726 aa	Known RBP	6.95	□□□□□ -1.3
CREM-238	ENST00000488741	EHBP1L1	Q8N3D4	1523 aa		6.95	□□□□□ -1.3
CREM-238	ENST00000488741	NCOA1	Q15788	1441 aa		6.94	□□□□□ -1.3
CREM-238	ENST00000488741	SMG6	Q86US8	1419 aa	Known RBP	6.94	□□□□□ -1.3
CREM-238	ENST00000488741	KIF21A	Q7Z4S6	1674 aa		6.94	□□□□□ -1.3
CREM-238	ENST00000488741	HSPA5	P11021	654 aa	Known RBP	6.94	□□□□□ -1.3
CREM-238	ENST00000488741	MLLT3	P42568	568 aa	Predicted RBP	6.94	□□□□□ -1.3
CREM-238	ENST00000488741	GOLGA2	Q08379	1002 aa		6.94	□□□□□ -1.3
CREM-238	ENST00000488741	WASHC2A	Q641Q2	1341 aa		6.94	□□□□□ -1.3
CREM-238	ENST00000488741	MYOM3	Q5VTT5	1437 aa		6.93	□□□□□ -1.3
CREM-238	ENST00000488741	ZMYND10	O75800	440 aa		6.93	□□□□□ -1.3
CREM-238	ENST00000488741	IRX6	P78412	446 aa	Predicted RBP	6.93	□□□□□ -1.3
CREM-238	ENST00000488741	RBM26	Q5T8P6	1007 aa	Known RBP	6.93	□□□□□ -1.3
CREM-238	ENST00000488741	IPO9	Q96P70	1041 aa	Known RBP	6.93	□□□□□ -1.3
CREM-238	ENST00000488741	PRKRIP1	Q9H875	184 aa	Predicted RBP	6.93	□□□□□ -1.3
CREM-238	ENST00000488741	RNF123	Q5XPI4	1314 aa		6.93	□□□□□ -1.3
CREM-238	ENST00000488741	MTUS2	Q5JR59	1369 aa		6.93	□□□□□ -1.3
CREM-238	ENST00000488741	CCDC7	Q96M83	1385 aa		6.93	□□□□□ -1.3
CREM-238	ENST00000488741	TCOF1	Q13428	1488 aa	Known RBP	6.92	□□□□□ -1.3
CREM-238	ENST00000488741	SNAPC4	Q5SXM2	1469 aa		6.92	□□□□□ -1.3
CREM-238	ENST00000488741	MS4A3	Q96HJ5	214 aa		6.92	□□□□□ -1.3
CREM-238	ENST00000488741	FHOD3	Q2V2M9	1422 aa		6.92	□□□□□ -1.3
CREM-238	ENST00000488741	B4GALNT3	Q6L9W6	998 aa		6.91	□□□□□ -1.3
CREM-238	ENST00000488741	MRS2	Q9HD23	443 aa		6.91	□□□□□ -1.3
CREM-238	ENST00000488741	USP35	Q9P2H5	1018 aa		6.91	□□□□□ -1.3
CREM-238	ENST00000488741	PTPRK	Q15262	1439 aa		6.91	□□□□□ -1.3
CREM-238	ENST00000488741	ARHGEF11	O15085	1522 aa		6.91	□□□□□ -1.3
CREM-238	ENST00000488741	UGGT2	Q9NYU1	1516 aa		6.91	□□□□□ -1.3
CREM-238	ENST00000488741	CAMK2B	Q13554	666 aa		6.9	□□□□□ -1.3
CREM-238	ENST00000488741	SMYD5	Q6GMV2	418 aa		6.9	□□□□□ -1.3
CREM-238	ENST00000488741	NUDC	Q9Y266	331 aa		6.9	□□□□□ -1.3
CREM-238	ENST00000488741	ABCA10	Q8WWZ4	1543 aa		6.9	□□□□□ -1.31
CREM-238	ENST00000488741	SAMD9	Q5K651	1589 aa		6.9	□□□□□ -1.31
CREM-238	ENST00000488741	MKRN3	Q13064	507 aa	Known RBP	6.89	□□□□□ -1.31
CREM-238	ENST00000488741	GPBP1L1	Q9HC44	474 aa	Predicted RBP	6.89	□□□□□ -1.31
CREM-238	ENST00000488741	CADPS	Q9ULU8	1353 aa		6.89	□□□□□ -1.31
CREM-238	ENST00000488741	GRIN2B	Q13224	1484 aa		6.89	□□□□□ -1.31
CREM-238	ENST00000488741	DNMBP	Q6XZF7	1577 aa		6.88	□□□□□ -1.31
CREM-238	ENST00000488741	MIA2	Q96PC5	1412 aa		6.88	□□□□□ -1.31
CREM-238	ENST00000488741	ARID4B	Q4LE39	1312 aa	Predicted RBP	6.88	□□□□□ -1.31
CREM-238	ENST00000488741	POTEM	A6NI47	508 aa		6.88	□□□□□ -1.31
CREM-238	ENST00000488741	DPY19L2	Q6NUT2	758 aa		6.88	□□□□□ -1.31
CREM-238	ENST00000488741	BARGIN	Q6ZT62	677 aa		6.88	□□□□□ -1.31
CREM-238	ENST00000488741	CCDC136	Q96JN2	1154 aa		6.88	□□□□□ -1.31
CREM-238	ENST00000488741	C11orf95	C9JLR9	678 aa	Predicted RBP	6.87	□□□□□ -1.31
CREM-238	ENST00000488741	DPYSL4	O14531	572 aa		6.87	□□□□□ -1.31
CREM-238	ENST00000488741	TCERG1	O14776	1098 aa	Known RBP	6.87	□□□□□ -1.31
CREM-238	ENST00000488741	PPM1G	O15355	546 aa	Predicted RBP	6.87	□□□□□ -1.31
CREM-238	ENST00000488741	PPP1R15B	Q5SWA1	713 aa		6.87	□□□□□ -1.31
CREM-238	ENST00000488741	FAM9B	Q8IZU0	186 aa		6.87	□□□□□ -1.31
CREM-238	ENST00000488741	OTUD5	Q96G74	571 aa		6.87	□□□□□ -1.31
CREM-238	ENST00000488741	ATP1B4	Q9UN42	357 aa	Predicted RBP	6.87	□□□□□ -1.31
CREM-238	ENST00000488741	LRRIQ1	Q96JM4	1722 aa		6.87	□□□□□ -1.31
CREM-238	ENST00000488741	DENND4B	O75064	1496 aa	Predicted RBP	6.86	□□□□□ -1.31
CREM-238	ENST00000488741	RPRD2	Q5VT52	1461 aa	Known RBP	6.86	□□□□□ -1.31
CREM-238	ENST00000488741	SPATA31E1	Q6ZUB1	1445 aa		6.86	□□□□□ -1.31
CREM-238	ENST00000488741	CCDC184	Q52MB2	194 aa		6.86	□□□□□ -1.31
CREM-238	ENST00000488741	GPIHBP1	Q8IV16	184 aa		6.86	□□□□□ -1.31
CREM-238	ENST00000488741	KRI1	Q8N9T8	703 aa	Known RBP	6.86	□□□□□ -1.31
CREM-238	ENST00000488741	EMILIN3	Q9NT22	766 aa		6.86	□□□□□ -1.31
CREM-238	ENST00000488741	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	6.86	□□□□□ -1.31
CREM-238	ENST00000488741	ARIH1	Q9Y4X5	557 aa	Predicted RBP	6.86	□□□□□ -1.31
CREM-238	ENST00000488741	TEX14	Q8IWB6	1497 aa		6.85	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms