RNA–Protein interactions for RNA: ENST00000488655.5

LRMDA-204, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2

Gene LRMDA, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-204ENST00000488655 ATP7AQ04656 1500 aa11.74□□□□□ -0.53
LRMDA-204ENST00000488655 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
LRMDA-204ENST00000488655 PLXNC1O60486 1568 aa11.73□□□□□ -0.53
LRMDA-204ENST00000488655 CCDC141Q6ZP82 1450 aa11.71□□□□□ -0.53
LRMDA-204ENST00000488655 ZNF644Q9H582 1327 aaPredicted RBP11.71□□□□□ -0.53
LRMDA-204ENST00000488655 AFAP1Q8N556 730 aa11.71□□□□□ -0.53
LRMDA-204ENST00000488655 FER1L4A9Z1Z3 1794 aa11.71□□□□□ -0.54
LRMDA-204ENST00000488655 AGLP35573 1532 aa11.7□□□□□ -0.54
LRMDA-204ENST00000488655 ATP10AO60312 1499 aa11.7□□□□□ -0.54
LRMDA-204ENST00000488655 RTEL1-TNFRSF6BF6WH68 1400 aa11.7□□□□□ -0.54
LRMDA-204ENST00000488655 FGD6Q6ZV73 1430 aa11.7□□□□□ -0.54
LRMDA-204ENST00000488655 C9orf84Q5VXU9 1444 aa11.69□□□□□ -0.54
LRMDA-204ENST00000488655 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
LRMDA-204ENST00000488655 HNRNPMP52272 730 aaKnown RBP eCLIP11.68□□□□□ -0.545e-6■■■□□ 17.7
LRMDA-204ENST00000488655 MADDQ8WXG6 1647 aa11.68□□□□□ -0.54
LRMDA-204ENST00000488655 RSPH4AQ5TD94 716 aa11.67□□□□□ -0.54
LRMDA-204ENST00000488655 IFNLR1Q8IU57 520 aaPredicted RBP11.67□□□□□ -0.54
LRMDA-204ENST00000488655 SHANK2Q9UPX8 1470 aa11.67□□□□□ -0.54
LRMDA-204ENST00000488655 EIF2AK4Q9P2K8 1649 aaKnown RBP11.66□□□□□ -0.54
LRMDA-204ENST00000488655 MROH2AA6NES4 1674 aa11.65□□□□□ -0.54
LRMDA-204ENST00000488655 RIMS1Q86UR5 1692 aaKnown RBP11.65□□□□□ -0.54
LRMDA-204ENST00000488655 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
LRMDA-204ENST00000488655 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
LRMDA-204ENST00000488655 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
LRMDA-204ENST00000488655 ABCC5O15440 1437 aa11.63□□□□□ -0.55
LRMDA-204ENST00000488655 DAPK1P53355 1430 aa11.63□□□□□ -0.55
LRMDA-204ENST00000488655 RNF17Q9BXT8 1623 aaKnown RBP11.63□□□□□ -0.55
LRMDA-204ENST00000488655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.63□□□□□ -0.55
LRMDA-204ENST00000488655 A2MP01023 1474 aa11.63□□□□□ -0.55
LRMDA-204ENST00000488655 C3P01024 1663 aa11.62□□□□□ -0.55
LRMDA-204ENST00000488655 RRBP1Q9P2E9 1410 aaKnown RBP11.61□□□□□ -0.55
LRMDA-204ENST00000488655 DEPDC5O75140 1603 aa11.61□□□□□ -0.55
LRMDA-204ENST00000488655 ADGRL2O95490 1459 aa11.61□□□□□ -0.55
LRMDA-204ENST00000488655 CLTCQ00610 1675 aaKnown RBP11.6□□□□□ -0.55
LRMDA-204ENST00000488655 MROH1Q8NDA8 1641 aa11.6□□□□□ -0.55
LRMDA-204ENST00000488655 ZC3H13Q5T200 1668 aaKnown RBP11.59□□□□□ -0.55
LRMDA-204ENST00000488655 DUOX2Q9NRD8 1548 aa11.59□□□□□ -0.55
LRMDA-204ENST00000488655 FAM135AQ9P2D6 1515 aa11.59□□□□□ -0.55
LRMDA-204ENST00000488655 DHX29Q7Z478 1369 aaKnown RBP11.58□□□□□ -0.56
LRMDA-204ENST00000488655 PTPRMP28827 1452 aa11.57□□□□□ -0.56
LRMDA-204ENST00000488655 SETD1BQ9UPS6 1966 aaKnown RBP11.57□□□□□ -0.56
LRMDA-204ENST00000488655 GCC2Q8IWJ2 1684 aa11.56□□□□□ -0.56
LRMDA-204ENST00000488655 SPDYE2BA6NHP3 402 aa11.56□□□□□ -0.56
LRMDA-204ENST00000488655 CEP152O94986 1710 aa11.56□□□□□ -0.56
LRMDA-204ENST00000488655 SPDYE6P0CI01 402 aa11.56□□□□□ -0.56
LRMDA-204ENST00000488655 TSPY4P0CV99 314 aa11.56□□□□□ -0.56
LRMDA-204ENST00000488655 TSPY10P0CW01 314 aa11.56□□□□□ -0.56
LRMDA-204ENST00000488655 SPDYE2Q495Y8 402 aa11.56□□□□□ -0.56
LRMDA-204ENST00000488655 PTPRKQ15262 1439 aa11.55□□□□□ -0.56
LRMDA-204ENST00000488655 NCOA1Q15788 1441 aa11.55□□□□□ -0.56
LRMDA-204ENST00000488655 SSUH2Q9Y2M2 353 aa11.55□□□□□ -0.56
LRMDA-204ENST00000488655 PRDM15P57071 1507 aaPredicted RBP11.55□□□□□ -0.56
LRMDA-204ENST00000488655 ERBINQ96RT1 1412 aa11.54□□□□□ -0.56
LRMDA-204ENST00000488655 PPARGC1BQ86YN6 1023 aaKnown RBP11.54□□□□□ -0.56
LRMDA-204ENST00000488655 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
LRMDA-204ENST00000488655 PREX1Q8TCU6 1659 aa11.54□□□□□ -0.56
LRMDA-204ENST00000488655 KDM5DQ9BY66 1539 aa11.53□□□□□ -0.56
LRMDA-204ENST00000488655 ARID4BQ4LE39 1312 aaPredicted RBP11.53□□□□□ -0.56
LRMDA-204ENST00000488655 UNC13BO14795 1591 aa11.52□□□□□ -0.57
LRMDA-204ENST00000488655 VWDEQ8N2E2 1590 aa11.52□□□□□ -0.57
LRMDA-204ENST00000488655 CAMSAP1Q5T5Y3 1602 aa11.52□□□□□ -0.57
LRMDA-204ENST00000488655 ROCK1Q13464 1354 aa11.52□□□□□ -0.57
LRMDA-204ENST00000488655 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.57
LRMDA-204ENST00000488655 ANKRD30AQ9BXX3 1397 aa11.51□□□□□ -0.57
LRMDA-204ENST00000488655 KIF15Q9NS87 1388 aa11.51□□□□□ -0.57
LRMDA-204ENST00000488655 CFAP65Q6ZU64 1925 aaKnown RBP11.5□□□□□ -0.57
LRMDA-204ENST00000488655 ZNF142P52746 1687 aaPredicted RBP11.49□□□□□ -0.57
LRMDA-204ENST00000488655 FAM50AQ14320 339 aaKnown RBP11.49□□□□□ -0.57
LRMDA-204ENST00000488655 ABCC3O15438 1527 aa11.48□□□□□ -0.57
LRMDA-204ENST00000488655 IQGAP3Q86VI3 1631 aa11.47□□□□□ -0.57
LRMDA-204ENST00000488655 LMTK2Q8IWU2 1503 aa11.47□□□□□ -0.57
LRMDA-204ENST00000488655 PKD2Q13563 968 aa11.47□□□□□ -0.57
LRMDA-204ENST00000488655 MLECQ14165 292 aa11.47□□□□□ -0.57
LRMDA-204ENST00000488655 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
LRMDA-204ENST00000488655 TET3O43151 1660 aa11.46□□□□□ -0.57
LRMDA-204ENST00000488655 MYO3AQ8NEV4 1616 aa11.46□□□□□ -0.57
LRMDA-204ENST00000488655 STAG3Q9UJ98 1225 aa11.46□□□□□ -0.57
LRMDA-204ENST00000488655 ANKRD50Q9ULJ7 1429 aa11.45□□□□□ -0.58
LRMDA-204ENST00000488655 KIF3BO15066 747 aa11.45□□□□□ -0.58
LRMDA-204ENST00000488655 RRP7BPQ9NSQ0 103 aa11.45□□□□□ -0.58
LRMDA-204ENST00000488655 LMTK3Q96Q04 1460 aa11.44□□□□□ -0.58
LRMDA-204ENST00000488655 NPATQ14207 1427 aa11.44□□□□□ -0.58
LRMDA-204ENST00000488655 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
LRMDA-204ENST00000488655 SPATA31D1Q6ZQQ2 1576 aa11.44□□□□□ -0.58
LRMDA-204ENST00000488655 PZPP20742 1482 aa11.44□□□□□ -0.58
LRMDA-204ENST00000488655 ZMYM3Q14202 1370 aa11.43□□□□□ -0.58
LRMDA-204ENST00000488655 E9PCH4 1651 aa11.43□□□□□ -0.58
LRMDA-204ENST00000488655 GGT6Q6P531 493 aa11.43□□□□□ -0.58
LRMDA-204ENST00000488655 EFCAB6Q5THR3 1501 aa11.43□□□□□ -0.58
LRMDA-204ENST00000488655 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
LRMDA-204ENST00000488655 SPOCK2Q92563 424 aa11.42□□□□□ -0.58
LRMDA-204ENST00000488655 KDM5AP29375 1690 aaKnown RBP11.42□□□□□ -0.58
LRMDA-204ENST00000488655 HFM1A2PYH4 1435 aa11.42□□□□□ -0.58
LRMDA-204ENST00000488655 NAIPQ13075 1403 aa11.42□□□□□ -0.58
LRMDA-204ENST00000488655 ARHGAP31Q2M1Z3 1444 aa11.42□□□□□ -0.58
LRMDA-204ENST00000488655 STRCQ7RTU9 1775 aa11.41□□□□□ -0.58
LRMDA-204ENST00000488655 CEBPAP49715 358 aaPredicted RBP11.39□□□□□ -0.59
LRMDA-204ENST00000488655 UBR1Q8IWV7 1749 aa11.39□□□□□ -0.59
LRMDA-204ENST00000488655 CEP170BQ9Y4F5 1589 aaPredicted RBP11.39□□□□□ -0.59
LRMDA-204ENST00000488655 MYO5BQ9ULV0 1848 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms