RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 PDIA6Q15084 440 aa10.37□□□□□ -0.75
ITGB1-214ENST00000488427 SMYD5Q6GMV2 418 aa10.37□□□□□ -0.75
ITGB1-214ENST00000488427 EVI5O60447 810 aa10.35□□□□□ -0.75
ITGB1-214ENST00000488427 PTPREP23469 700 aa10.35□□□□□ -0.75
ITGB1-214ENST00000488427 FOSBP53539 338 aa10.35□□□□□ -0.75
ITGB1-214ENST00000488427 SLC4A5Q9BY07 1137 aa10.34□□□□□ -0.75
ITGB1-214ENST00000488427 PTPN5P54829 565 aa10.32□□□□□ -0.76
ITGB1-214ENST00000488427 JPH4Q96JJ6 628 aa10.32□□□□□ -0.76
ITGB1-214ENST00000488427 ANO8Q9HCE9 1232 aaPredicted RBP10.31□□□□□ -0.76
ITGB1-214ENST00000488427 GOLGA8CPA6NN73 597 aa10.3□□□□□ -0.76
ITGB1-214ENST00000488427 ZDHHC16Q969W1 377 aa10.29□□□□□ -0.76
ITGB1-214ENST00000488427 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
ITGB1-214ENST00000488427 ZBED2Q9BTP6 218 aa10.28□□□□□ -0.76
ITGB1-214ENST00000488427 MRPL50Q8N5N7 158 aaKnown RBP10.27□□□□□ -0.77
ITGB1-214ENST00000488427 EPAS1Q99814 870 aa10.27□□□□□ -0.77
ITGB1-214ENST00000488427 THSD4Q6ZMP0 1018 aa10.26□□□□□ -0.77
ITGB1-214ENST00000488427 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
ITGB1-214ENST00000488427 ADAM33Q9BZ11 813 aa10.26□□□□□ -0.77
ITGB1-214ENST00000488427 WNT2BQ93097 391 aa10.25□□□□□ -0.77
ITGB1-214ENST00000488427 NBPF3Q9H094 633 aa10.25□□□□□ -0.77
ITGB1-214ENST00000488427 PHF14O94880 888 aa10.24□□□□□ -0.77
ITGB1-214ENST00000488427 TESPA1A2RU30 521 aaPredicted RBP10.23□□□□□ -0.77
ITGB1-214ENST00000488427 SEMA3EO15041 775 aa10.23□□□□□ -0.77
ITGB1-214ENST00000488427 TYW1BQ6NUM6 668 aa10.22□□□□□ -0.77
ITGB1-214ENST00000488427 GRXCR2A6NFK2 248 aa10.21□□□□□ -0.77
ITGB1-214ENST00000488427 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
ITGB1-214ENST00000488427 DDX12PQ92771 950 aa10.2□□□□□ -0.78
ITGB1-214ENST00000488427 PPP1R3GB7ZBB8 358 aa10.19□□□□□ -0.78
ITGB1-214ENST00000488427 PCDHGA10Q9Y5H3 936 aa10.18□□□□□ -0.78
ITGB1-214ENST00000488427 RGS20O76081 388 aa10.17□□□□□ -0.78
ITGB1-214ENST00000488427 RABGEF1Q9UJ41 708 aa10.16□□□□□ -0.78
ITGB1-214ENST00000488427 MAP3K7O43318 606 aa10.14□□□□□ -0.79
ITGB1-214ENST00000488427 MLLT3P42568 568 aaPredicted RBP10.14□□□□□ -0.79
ITGB1-214ENST00000488427 ANKK1Q8NFD2 765 aa10.14□□□□□ -0.79
ITGB1-214ENST00000488427 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-214ENST00000488427 PROX2Q3B8N5 592 aa10.13□□□□□ -0.79
ITGB1-214ENST00000488427 CERKQ8TCT0 537 aa10.13□□□□□ -0.79
ITGB1-214ENST00000488427 A0A0G2JS52 829 aa10.12□□□□□ -0.79
ITGB1-214ENST00000488427 COL9A1P20849 921 aa10.12□□□□□ -0.79
ITGB1-214ENST00000488427 OSBPP22059 807 aa10.11□□□□□ -0.79
ITGB1-214ENST00000488427 LMOD2Q6P5Q4 547 aa10.1□□□□□ -0.79
ITGB1-214ENST00000488427 LAPTM4BQ86VI4 370 aa10.1□□□□□ -0.79
ITGB1-214ENST00000488427 NUTM2FA1L443 756 aa10.09□□□□□ -0.79
ITGB1-214ENST00000488427 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
ITGB1-214ENST00000488427 GPIHBP1Q8IV16 184 aa10.09□□□□□ -0.79
ITGB1-214ENST00000488427 RBM33Q96EV2 1170 aaKnown RBP10.09□□□□□ -0.79
ITGB1-214ENST00000488427 IRX2Q9BZI1 471 aaPredicted RBP10.07□□□□□ -0.8
ITGB1-214ENST00000488427 KIAA1468Q9P260 1216 aa10.07□□□□□ -0.8
ITGB1-214ENST00000488427 ONECUT3O60422 494 aaPredicted RBP10.06□□□□□ -0.8
ITGB1-214ENST00000488427 FCHSD2O94868 740 aa10.06□□□□□ -0.8
ITGB1-214ENST00000488427 BCAMP50895 628 aa10.06□□□□□ -0.8
ITGB1-214ENST00000488427 C6orf132Q5T0Z8 1188 aa10.06□□□□□ -0.8
ITGB1-214ENST00000488427 SOWAHBA6NEL2 793 aa10.05□□□□□ -0.8
ITGB1-214ENST00000488427 NYAP1Q6ZVC0 841 aa10.05□□□□□ -0.8
ITGB1-214ENST00000488427 ZFRQ96KR1 1074 aaKnown RBP10.05□□□□□ -0.8
ITGB1-214ENST00000488427 RBM26Q5T8P6 1007 aaKnown RBP10.04□□□□□ -0.8
ITGB1-214ENST00000488427 ITGBL1O95965 494 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-214ENST00000488427 TRIM6-TRIM34B2RNG4 842 aa10.02□□□□□ -0.81
ITGB1-214ENST00000488427 HIC1Q14526 733 aa10.02□□□□□ -0.81
ITGB1-214ENST00000488427 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.81
ITGB1-214ENST00000488427 SEPT9Q9UHD8 586 aaPredicted RBP10.01□□□□□ -0.81
ITGB1-214ENST00000488427 FAM98CQ17RN3 349 aaKnown RBP9.99□□□□□ -0.81
ITGB1-214ENST00000488427 WBP1LQ9NX94 342 aa9.99□□□□□ -0.81
ITGB1-214ENST00000488427 PTGDRQ13258 359 aa9.98□□□□□ -0.81
ITGB1-214ENST00000488427 TSR1Q2NL82 804 aaKnown RBP9.98□□□□□ -0.81
ITGB1-214ENST00000488427 GNPATO15228 680 aa9.97□□□□□ -0.81
ITGB1-214ENST00000488427 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.97□□□□□ -0.81
ITGB1-214ENST00000488427 KCNC4Q03721 635 aa9.96□□□□□ -0.82
ITGB1-214ENST00000488427 PACS2Q86VP3 889 aa9.96□□□□□ -0.82
ITGB1-214ENST00000488427 LRCH3Q96II8 777 aa9.96□□□□□ -0.82
ITGB1-214ENST00000488427 PRSS12P56730 875 aa9.95□□□□□ -0.82
ITGB1-214ENST00000488427 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
ITGB1-214ENST00000488427 PRIM1P49642 420 aaKnown RBP9.94□□□□□ -0.82
ITGB1-214ENST00000488427 CDHR5Q9HBB8 845 aa9.94□□□□□ -0.82
ITGB1-214ENST00000488427 HPS5Q9UPZ3 1129 aa9.94□□□□□ -0.82
ITGB1-214ENST00000488427 NBPF26B4DH59 902 aa9.93□□□□□ -0.82
ITGB1-214ENST00000488427 ZC3H15Q8WU90 426 aaKnown RBP9.93□□□□□ -0.82
ITGB1-214ENST00000488427 CDCA7LQ96GN5 454 aa9.93□□□□□ -0.82
ITGB1-214ENST00000488427 KRI1Q8N9T8 703 aaKnown RBP9.92□□□□□ -0.82
ITGB1-214ENST00000488427 NPDC1Q9NQX5 325 aaPredicted RBP9.91□□□□□ -0.82
ITGB1-214ENST00000488427 TSKSQ9UJT2 592 aa9.91□□□□□ -0.82
ITGB1-214ENST00000488427 MINK1Q8N4C8 1332 aaPredicted RBP9.9□□□□□ -0.82
ITGB1-214ENST00000488427 OATP04181 439 aa9.9□□□□□ -0.82
ITGB1-214ENST00000488427 ZMYND10O75800 440 aa9.89□□□□□ -0.83
ITGB1-214ENST00000488427 MAP2K5Q13163 448 aa9.89□□□□□ -0.83
ITGB1-214ENST00000488427 RBM46Q8TBY0 533 aaKnown RBP9.89□□□□□ -0.83
ITGB1-214ENST00000488427 GPR37O15354 613 aa9.88□□□□□ -0.83
ITGB1-214ENST00000488427 PPP4CP60510 307 aa9.88□□□□□ -0.83
ITGB1-214ENST00000488427 PADI6Q6TGC4 694 aa9.88□□□□□ -0.83
ITGB1-214ENST00000488427 BARGINQ6ZT62 677 aa9.88□□□□□ -0.83
ITGB1-214ENST00000488427 SLC4A3P48751 1232 aa9.87□□□□□ -0.83
ITGB1-214ENST00000488427 HDGFP51858 240 aaKnown RBP9.86□□□□□ -0.83
ITGB1-214ENST00000488427 TPRNQ4KMQ1 711 aa9.86□□□□□ -0.83
ITGB1-214ENST00000488427 Q6ZNB5 142 aa9.86□□□□□ -0.83
ITGB1-214ENST00000488427 TTC13Q8NBP0 860 aa9.85□□□□□ -0.83
ITGB1-214ENST00000488427 SMAPO00193 183 aa9.83□□□□□ -0.84
ITGB1-214ENST00000488427 SAMD7Q7Z3H4 446 aa9.83□□□□□ -0.84
ITGB1-214ENST00000488427 PNMA3Q9UL41 463 aa9.83□□□□□ -0.84
ITGB1-214ENST00000488427 IRF6O14896 467 aa9.82□□□□□ -0.84
ITGB1-214ENST00000488427 TATDN2Q93075 761 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms