RNA–Protein interactions for RNA: ENST00000488268.5

ECHDC2-216, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-216ENST00000488268 LRRC7Q96NW7 1537 aa17.09■□□□□ 0.33
ECHDC2-216ENST00000488268 SYNMO15061 1565 aa17.09■□□□□ 0.33
ECHDC2-216ENST00000488268 IQGAP1P46940 1657 aa17.09■□□□□ 0.33
ECHDC2-216ENST00000488268 HNRNPMP52272 730 aaKnown RBP eCLIP17.08■□□□□ 0.326e-7■□□□□ 9
ECHDC2-216ENST00000488268 GPATCH8Q9UKJ3 1502 aaKnown RBP17.07■□□□□ 0.32
ECHDC2-216ENST00000488268 CCDC18Q5T9S5 1454 aa17.07■□□□□ 0.32
ECHDC2-216ENST00000488268 KIAA1107Q9UPP5 1409 aa17.07■□□□□ 0.32
ECHDC2-216ENST00000488268 XIRP1Q702N8 1843 aaKnown RBP17.07■□□□□ 0.32
ECHDC2-216ENST00000488268 ANKLE2Q86XL3 938 aa17.06■□□□□ 0.32
ECHDC2-216ENST00000488268 NPHP4O75161 1426 aaPredicted RBP17.05■□□□□ 0.32
ECHDC2-216ENST00000488268 TNRQ92752 1358 aa17.05■□□□□ 0.32
ECHDC2-216ENST00000488268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.05■□□□□ 0.32
ECHDC2-216ENST00000488268 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
ECHDC2-216ENST00000488268 FBXO31Q5XUX0 539 aaPredicted RBP17.04■□□□□ 0.32
ECHDC2-216ENST00000488268 POTEAQ6S8J7 498 aa17.04■□□□□ 0.32
ECHDC2-216ENST00000488268 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
ECHDC2-216ENST00000488268 PZPP20742 1482 aa17.04■□□□□ 0.32
ECHDC2-216ENST00000488268 SETD1AO15047 1707 aaKnown RBP17.03■□□□□ 0.32
ECHDC2-216ENST00000488268 ZC3H13Q5T200 1668 aaKnown RBP17.03■□□□□ 0.32
ECHDC2-216ENST00000488268 CASKIN1Q8WXD9 1431 aa17.03■□□□□ 0.32
ECHDC2-216ENST00000488268 UGGT1Q9NYU2 1555 aa17.02■□□□□ 0.32
ECHDC2-216ENST00000488268 PLEKHH2Q8IVE3 1493 aa17.02■□□□□ 0.32
ECHDC2-216ENST00000488268 FAM135AQ9P2D6 1515 aa17.01■□□□□ 0.31
ECHDC2-216ENST00000488268 NLRP1Q9C000 1473 aa17■□□□□ 0.31
ECHDC2-216ENST00000488268 THEMISQ8N1K5 641 aaPredicted RBP17■□□□□ 0.31
ECHDC2-216ENST00000488268 KDM5DQ9BY66 1539 aa16.99■□□□□ 0.31
ECHDC2-216ENST00000488268 MIA2Q96PC5 1412 aa16.98■□□□□ 0.31
ECHDC2-216ENST00000488268 FYCO1Q9BQS8 1478 aa16.98■□□□□ 0.31
ECHDC2-216ENST00000488268 DHX29Q7Z478 1369 aaKnown RBP16.96■□□□□ 0.31
ECHDC2-216ENST00000488268 RTEL1-TNFRSF6BF6WH68 1400 aa16.95■□□□□ 0.3
ECHDC2-216ENST00000488268 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
ECHDC2-216ENST00000488268 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
ECHDC2-216ENST00000488268 CFDP1Q9UEE9 299 aaPredicted RBP16.93■□□□□ 0.3
ECHDC2-216ENST00000488268 FAM135BQ49AJ0 1406 aa16.92■□□□□ 0.3
ECHDC2-216ENST00000488268 UBR1Q8IWV7 1749 aa16.9■□□□□ 0.3
ECHDC2-216ENST00000488268 KIF3BO15066 747 aa16.89■□□□□ 0.29
ECHDC2-216ENST00000488268 APLP2Q06481 763 aa16.89■□□□□ 0.29
ECHDC2-216ENST00000488268 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
ECHDC2-216ENST00000488268 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
ECHDC2-216ENST00000488268 CCNB3Q8WWL7 1395 aa16.88■□□□□ 0.29
ECHDC2-216ENST00000488268 CFAP65Q6ZU64 1925 aaKnown RBP16.87■□□□□ 0.29
ECHDC2-216ENST00000488268 ZNF644Q9H582 1327 aaPredicted RBP16.87■□□□□ 0.29
ECHDC2-216ENST00000488268 TIAM1Q13009 1591 aa16.86■□□□□ 0.29
ECHDC2-216ENST00000488268 MTUS2Q5JR59 1369 aa16.85■□□□□ 0.29
ECHDC2-216ENST00000488268 UPF1Q92900 1129 aaKnown RBP eCLIP16.83■□□□□ 0.28
ECHDC2-216ENST00000488268 SCAF11Q99590 1463 aaKnown RBP16.83■□□□□ 0.28
ECHDC2-216ENST00000488268 ARHGAP23Q9P227 1491 aa16.82■□□□□ 0.28
ECHDC2-216ENST00000488268 SLIT1O75093 1534 aa16.81■□□□□ 0.28
ECHDC2-216ENST00000488268 NCOA2Q15596 1464 aa16.81■□□□□ 0.28
ECHDC2-216ENST00000488268 ABCC3O15438 1527 aa16.8■□□□□ 0.28
ECHDC2-216ENST00000488268 ERVK-7P63135 1459 aa16.8■□□□□ 0.28
ECHDC2-216ENST00000488268 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
ECHDC2-216ENST00000488268 LTKP29376 864 aa16.79■□□□□ 0.28
ECHDC2-216ENST00000488268 MAP3K1Q13233 1512 aa16.79■□□□□ 0.28
ECHDC2-216ENST00000488268 SRCAPQ6ZRS2 3230 aa16.78■□□□□ 0.28
ECHDC2-216ENST00000488268 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
ECHDC2-216ENST00000488268 CEP152O94986 1710 aa16.77■□□□□ 0.28
ECHDC2-216ENST00000488268 EHBP1L1Q8N3D4 1523 aa16.76■□□□□ 0.27
ECHDC2-216ENST00000488268 MROH1Q8NDA8 1641 aa16.76■□□□□ 0.27
ECHDC2-216ENST00000488268 TMEM94Q12767 1356 aa16.75■□□□□ 0.27
ECHDC2-216ENST00000488268 LRRC9Q6ZRR7 1453 aa16.74■□□□□ 0.27
ECHDC2-216ENST00000488268 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
ECHDC2-216ENST00000488268 TXNDC2Q86VQ3 553 aa16.73■□□□□ 0.27
ECHDC2-216ENST00000488268 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
ECHDC2-216ENST00000488268 COL16A1Q07092 1604 aaPredicted RBP16.73■□□□□ 0.27
ECHDC2-216ENST00000488268 EIF2AK4Q9P2K8 1649 aaKnown RBP16.73■□□□□ 0.27
ECHDC2-216ENST00000488268 JCADQ9P266 1359 aa16.72■□□□□ 0.27
ECHDC2-216ENST00000488268 CAMSAP2Q08AD1 1489 aa16.72■□□□□ 0.27
ECHDC2-216ENST00000488268 ARHGEF5Q12774 1597 aa16.72■□□□□ 0.27
ECHDC2-216ENST00000488268 LRP6O75581 1613 aa16.71■□□□□ 0.27
ECHDC2-216ENST00000488268 TET3O43151 1660 aa16.7■□□□□ 0.26
ECHDC2-216ENST00000488268 RSPH4AQ5TD94 716 aa16.7■□□□□ 0.26
ECHDC2-216ENST00000488268 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
ECHDC2-216ENST00000488268 PRDM15P57071 1507 aaPredicted RBP16.7■□□□□ 0.26
ECHDC2-216ENST00000488268 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
ECHDC2-216ENST00000488268 NWD1Q149M9 1564 aa16.69■□□□□ 0.26
ECHDC2-216ENST00000488268 KCNA6P17658 529 aa16.68■□□□□ 0.26
ECHDC2-216ENST00000488268 SHPRHQ149N8 1683 aa16.67■□□□□ 0.26
ECHDC2-216ENST00000488268 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
ECHDC2-216ENST00000488268 MAST1Q9Y2H9 1570 aa16.66■□□□□ 0.26
ECHDC2-216ENST00000488268 NKTRP30414 1462 aaKnown RBP16.66■□□□□ 0.26
ECHDC2-216ENST00000488268 CDK12Q9NYV4 1490 aaPredicted RBP16.66■□□□□ 0.26
ECHDC2-216ENST00000488268 TMEM2Q9UHN6 1383 aa16.65■□□□□ 0.26
ECHDC2-216ENST00000488268 ZNF772Q68DY9 489 aaPredicted RBP16.65■□□□□ 0.26
ECHDC2-216ENST00000488268 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
ECHDC2-216ENST00000488268 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
ECHDC2-216ENST00000488268 EID1Q9Y6B2 187 aa16.65■□□□□ 0.26
ECHDC2-216ENST00000488268 ARHGAP31Q2M1Z3 1444 aa16.64■□□□□ 0.25
ECHDC2-216ENST00000488268 FGD6Q6ZV73 1430 aa16.64■□□□□ 0.25
ECHDC2-216ENST00000488268 SLAIN2Q9P270 581 aa16.64■□□□□ 0.25
ECHDC2-216ENST00000488268 SPATA31A6Q5VVP1 1343 aa16.64■□□□□ 0.25
ECHDC2-216ENST00000488268 CHD2O14647 1828 aaKnown RBP16.63■□□□□ 0.25
ECHDC2-216ENST00000488268 MSH6P52701 1360 aa16.61■□□□□ 0.25
ECHDC2-216ENST00000488268 TSPY4P0CV99 314 aa16.6■□□□□ 0.25
ECHDC2-216ENST00000488268 TSPY10P0CW01 314 aa16.6■□□□□ 0.25
ECHDC2-216ENST00000488268 EFCAB6Q5THR3 1501 aa16.6■□□□□ 0.25
ECHDC2-216ENST00000488268 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
ECHDC2-216ENST00000488268 RXRBP28702 533 aa16.59■□□□□ 0.25
ECHDC2-216ENST00000488268 SLC26A8Q96RN1 970 aa16.58■□□□□ 0.24
ECHDC2-216ENST00000488268 DIP2AQ14689 1571 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms