RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 PBX2P40425 430 aa7.66□□□□□ -1.18
RBM28-207ENST00000488249 C6orf132Q5T0Z8 1188 aa7.66□□□□□ -1.18
RBM28-207ENST00000488249 RBM26Q5T8P6 1007 aaKnown RBP7.66□□□□□ -1.18
RBM28-207ENST00000488249 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.66□□□□□ -1.18
RBM28-207ENST00000488249 PCDH10Q9P2E7 1040 aa7.66□□□□□ -1.18
RBM28-207ENST00000488249 TSR1Q2NL82 804 aaKnown RBP7.65□□□□□ -1.18
RBM28-207ENST00000488249 CDAN1Q8IWY9 1227 aa7.65□□□□□ -1.18
RBM28-207ENST00000488249 PSEN2P49810 448 aa7.64□□□□□ -1.19
RBM28-207ENST00000488249 KCNH8Q96L42 1107 aa7.64□□□□□ -1.19
RBM28-207ENST00000488249 KCNK17Q96T54 332 aa7.64□□□□□ -1.19
RBM28-207ENST00000488249 AXIN2Q9Y2T1 843 aa7.64□□□□□ -1.19
RBM28-207ENST00000488249 NUTM2FA1L443 756 aa7.62□□□□□ -1.19
RBM28-207ENST00000488249 LMOD2Q6P5Q4 547 aa7.62□□□□□ -1.19
RBM28-207ENST00000488249 CDHR5Q9HBB8 845 aa7.62□□□□□ -1.19
RBM28-207ENST00000488249 PPP1R3GB7ZBB8 358 aa7.61□□□□□ -1.19
RBM28-207ENST00000488249 COL9A1P20849 921 aa7.61□□□□□ -1.19
RBM28-207ENST00000488249 KRTAP3-3Q9BYR6 98 aa7.61□□□□□ -1.19
RBM28-207ENST00000488249 KRTAP3-2Q9BYR7 98 aa7.61□□□□□ -1.19
RBM28-207ENST00000488249 DMRTA1Q5VZB9 504 aa7.6□□□□□ -1.19
RBM28-207ENST00000488249 CERKQ8TCT0 537 aa7.6□□□□□ -1.19
RBM28-207ENST00000488249 NPDC1Q9NQX5 325 aaPredicted RBP7.6□□□□□ -1.19
RBM28-207ENST00000488249 LSM11P83369 360 aaKnown RBP eCLIP7.59□□□□□ -1.19
RBM28-207ENST00000488249 GPIHBP1Q8IV16 184 aa7.59□□□□□ -1.19
RBM28-207ENST00000488249 PTGDRQ13258 359 aa7.58□□□□□ -1.2
RBM28-207ENST00000488249 ZBED2Q9BTP6 218 aa7.58□□□□□ -1.2
RBM28-207ENST00000488249 GPR37O15354 613 aa7.57□□□□□ -1.2
RBM28-207ENST00000488249 FCHSD2O94868 740 aa7.57□□□□□ -1.2
RBM28-207ENST00000488249 SLC4A5Q9BY07 1137 aa7.57□□□□□ -1.2
RBM28-207ENST00000488249 TK2O00142 265 aa7.56□□□□□ -1.2
RBM28-207ENST00000488249 ANKRD13DQ6ZTN6 518 aa7.56□□□□□ -1.2
RBM28-207ENST00000488249 PRSS12P56730 875 aa7.55□□□□□ -1.2
RBM28-207ENST00000488249 HIC1Q14526 733 aa7.55□□□□□ -1.2
RBM28-207ENST00000488249 PROX2Q3B8N5 592 aa7.55□□□□□ -1.2
RBM28-207ENST00000488249 CDCA7LQ96GN5 454 aa7.55□□□□□ -1.2
RBM28-207ENST00000488249 VPS9D1Q9Y2B5 631 aa7.55□□□□□ -1.2
RBM28-207ENST00000488249 TRIM6-TRIM34B2RNG4 842 aa7.54□□□□□ -1.2
RBM28-207ENST00000488249 ONECUT3O60422 494 aaPredicted RBP7.54□□□□□ -1.2
RBM28-207ENST00000488249 ADGRD1Q6QNK2 874 aa7.54□□□□□ -1.2
RBM28-207ENST00000488249 RBM27Q9P2N5 1060 aaKnown RBP7.54□□□□□ -1.2
RBM28-207ENST00000488249 GNPATO15228 680 aa7.53□□□□□ -1.2
RBM28-207ENST00000488249 ZC3H15Q8WU90 426 aaKnown RBP7.53□□□□□ -1.2
RBM28-207ENST00000488249 TSKSQ9UJT2 592 aa7.53□□□□□ -1.2
RBM28-207ENST00000488249 PADI6Q6TGC4 694 aa7.52□□□□□ -1.21
RBM28-207ENST00000488249 TTC13Q8NBP0 860 aa7.52□□□□□ -1.21
RBM28-207ENST00000488249 FAM198AQ9UFP1 575 aa7.52□□□□□ -1.21
RBM28-207ENST00000488249 PACS2Q86VP3 889 aa7.51□□□□□ -1.21
RBM28-207ENST00000488249 KIAA1468Q9P260 1216 aa7.51□□□□□ -1.21
RBM28-207ENST00000488249 RABGEF1Q9UJ41 708 aa7.51□□□□□ -1.21
RBM28-207ENST00000488249 HRO43593 1189 aa7.5□□□□□ -1.21
RBM28-207ENST00000488249 FECHP22830 423 aa7.5□□□□□ -1.21
RBM28-207ENST00000488249 BHMG1C9JSJ3 638 aaPredicted RBP7.49□□□□□ -1.21
RBM28-207ENST00000488249 ZMYND10O75800 440 aa7.49□□□□□ -1.21
RBM28-207ENST00000488249 BARGINQ6ZT62 677 aa7.48□□□□□ -1.21
RBM28-207ENST00000488249 NBPF26B4DH59 902 aa7.47□□□□□ -1.21
RBM28-207ENST00000488249 C3orf80F5H4A9 247 aa7.47□□□□□ -1.21
RBM28-207ENST00000488249 TATDN2Q93075 761 aa7.47□□□□□ -1.21
RBM28-207ENST00000488249 STAC3Q96MF2 364 aa7.47□□□□□ -1.21
RBM28-207ENST00000488249 NBPF3Q9H094 633 aa7.47□□□□□ -1.21
RBM28-207ENST00000488249 PNMA3Q9UL41 463 aa7.47□□□□□ -1.21
RBM28-207ENST00000488249 MAP2K5Q13163 448 aa7.46□□□□□ -1.22
RBM28-207ENST00000488249 NUDT18Q6ZVK8 323 aa7.46□□□□□ -1.22
RBM28-207ENST00000488249 MRPL50Q8N5N7 158 aaKnown RBP7.46□□□□□ -1.22
RBM28-207ENST00000488249 ADGRG1Q9Y653 693 aa7.46□□□□□ -1.22
RBM28-207ENST00000488249 FAM161AQ3B820 660 aa7.45□□□□□ -1.22
RBM28-207ENST00000488249 LAPTM4BQ86VI4 370 aa7.45□□□□□ -1.22
RBM28-207ENST00000488249 SPNS2Q8IVW8 549 aa7.45□□□□□ -1.22
RBM28-207ENST00000488249 KRI1Q8N9T8 703 aaKnown RBP7.45□□□□□ -1.22
RBM28-207ENST00000488249 SEPT9Q9UHD8 586 aaPredicted RBP7.45□□□□□ -1.22
RBM28-207ENST00000488249 MINK1Q8N4C8 1332 aaPredicted RBP7.45□□□□□ -1.22
RBM28-207ENST00000488249 SMAPO00193 183 aa7.44□□□□□ -1.22
RBM28-207ENST00000488249 IRF6O14896 467 aa7.44□□□□□ -1.22
RBM28-207ENST00000488249 OATP04181 439 aa7.44□□□□□ -1.22
RBM28-207ENST00000488249 EYA1Q99502 592 aa7.44□□□□□ -1.22
RBM28-207ENST00000488249 FAM98CQ17RN3 349 aaKnown RBP7.43□□□□□ -1.22
RBM28-207ENST00000488249 TPRNQ4KMQ1 711 aa7.43□□□□□ -1.22
RBM28-207ENST00000488249 RBM46Q8TBY0 533 aaKnown RBP7.43□□□□□ -1.22
RBM28-207ENST00000488249 PXYLP1Q8TE99 480 aa7.42□□□□□ -1.22
RBM28-207ENST00000488249 GOLGA8CPA6NN73 597 aa7.41□□□□□ -1.22
RBM28-207ENST00000488249 METTL3Q86U44 580 aaKnown RBP7.41□□□□□ -1.22
RBM28-207ENST00000488249 CCDC102AQ96A19 550 aa7.41□□□□□ -1.22
RBM28-207ENST00000488249 MYT1LQ9UL68 1186 aa7.41□□□□□ -1.22
RBM28-207ENST00000488249 ZFRQ96KR1 1074 aaKnown RBP7.4□□□□□ -1.22
RBM28-207ENST00000488249 RCCD1A6NED2 376 aa7.39□□□□□ -1.23
RBM28-207ENST00000488249 DNAJB2P25686 324 aa7.39□□□□□ -1.23
RBM28-207ENST00000488249 SLC24A3Q9HC58 644 aa7.39□□□□□ -1.23
RBM28-207ENST00000488249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.38□□□□□ -1.23
RBM28-207ENST00000488249 AK7Q96M32 723 aa7.38□□□□□ -1.23
RBM28-207ENST00000488249 PHOX2BQ99453 314 aa7.38□□□□□ -1.23
RBM28-207ENST00000488249 HDGFP51858 240 aaKnown RBP7.37□□□□□ -1.23
RBM28-207ENST00000488249 MMRN1Q13201 1228 aa7.37□□□□□ -1.23
RBM28-207ENST00000488249 ANKK1Q8NFD2 765 aa7.37□□□□□ -1.23
RBM28-207ENST00000488249 WNT2BQ93097 391 aa7.37□□□□□ -1.23
RBM28-207ENST00000488249 SAMD7Q7Z3H4 446 aa7.36□□□□□ -1.23
RBM28-207ENST00000488249 RNF166Q96A37 237 aaPredicted RBP7.36□□□□□ -1.23
RBM28-207ENST00000488249 KCTD12Q96CX2 325 aaKnown RBP7.36□□□□□ -1.23
RBM28-207ENST00000488249 TMEM134Q9H6X4 195 aa7.36□□□□□ -1.23
RBM28-207ENST00000488249 TRIM66O15016 1216 aa7.35□□□□□ -1.23
RBM28-207ENST00000488249 PRKCSHP14314 528 aaPredicted RBP7.35□□□□□ -1.23
RBM28-207ENST00000488249 SWT1Q5T5J6 900 aaKnown RBP7.35□□□□□ -1.23
RBM28-207ENST00000488249 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms