RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
PCYT1A-215ENST00000488235 ZNF142P52746 1687 aaPredicted RBP17.73■□□□□ 0.43
PCYT1A-215ENST00000488235 MAST1Q9Y2H9 1570 aa17.72■□□□□ 0.43
PCYT1A-215ENST00000488235 KDM5DQ9BY66 1539 aa17.72■□□□□ 0.43
PCYT1A-215ENST00000488235 LTBP4Q8N2S1 1624 aa17.71■□□□□ 0.43
PCYT1A-215ENST00000488235 WASHC2CQ9Y4E1 1318 aa17.7■□□□□ 0.42
PCYT1A-215ENST00000488235 PZPP20742 1482 aa17.69■□□□□ 0.42
PCYT1A-215ENST00000488235 TCOF1Q13428 1488 aaKnown RBP17.69■□□□□ 0.42
PCYT1A-215ENST00000488235 A2ML1A8K2U0 1454 aa17.68■□□□□ 0.42
PCYT1A-215ENST00000488235 PLA2R1Q13018 1463 aa17.68■□□□□ 0.42
PCYT1A-215ENST00000488235 TNRQ92752 1358 aa17.67■□□□□ 0.42
PCYT1A-215ENST00000488235 ABCC5O15440 1437 aa17.67■□□□□ 0.42
PCYT1A-215ENST00000488235 DNMT1P26358 1616 aaKnown RBP17.67■□□□□ 0.42
PCYT1A-215ENST00000488235 MROH1Q8NDA8 1641 aa17.66■□□□□ 0.42
PCYT1A-215ENST00000488235 RNF17Q9BXT8 1623 aaKnown RBP17.66■□□□□ 0.42
PCYT1A-215ENST00000488235 FAM135AQ9P2D6 1515 aa17.66■□□□□ 0.42
PCYT1A-215ENST00000488235 ABCC3O15438 1527 aa17.65■□□□□ 0.42
PCYT1A-215ENST00000488235 ZNF335Q9H4Z2 1342 aaPredicted RBP17.65■□□□□ 0.42
PCYT1A-215ENST00000488235 PTPN23Q9H3S7 1636 aa17.65■□□□□ 0.42
PCYT1A-215ENST00000488235 FGD6Q6ZV73 1430 aa17.64■□□□□ 0.41
PCYT1A-215ENST00000488235 APLP2Q06481 763 aa17.63■□□□□ 0.41
PCYT1A-215ENST00000488235 PKD2Q13563 968 aa17.63■□□□□ 0.41
PCYT1A-215ENST00000488235 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
PCYT1A-215ENST00000488235 RRP7BPQ9NSQ0 103 aa17.61■□□□□ 0.41
PCYT1A-215ENST00000488235 KIF15Q9NS87 1388 aa17.61■□□□□ 0.41
PCYT1A-215ENST00000488235 DAPK1P53355 1430 aa17.61■□□□□ 0.41
PCYT1A-215ENST00000488235 SHANK2Q9UPX8 1470 aa17.61■□□□□ 0.41
PCYT1A-215ENST00000488235 DUOX2Q9NRD8 1548 aa17.61■□□□□ 0.41
PCYT1A-215ENST00000488235 CROCC2H7BZ55 1655 aa17.61■□□□□ 0.41
PCYT1A-215ENST00000488235 NEURL4Q96JN8 1562 aa17.59■□□□□ 0.41
PCYT1A-215ENST00000488235 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCYT1A-215ENST00000488235 CEP152O94986 1710 aa17.57■□□□□ 0.4
PCYT1A-215ENST00000488235 ZC3H13Q5T200 1668 aaKnown RBP17.57■□□□□ 0.4
PCYT1A-215ENST00000488235 SPATA31D1Q6ZQQ2 1576 aa17.57■□□□□ 0.4
PCYT1A-215ENST00000488235 ERVK-7P63135 1459 aa17.56■□□□□ 0.4
PCYT1A-215ENST00000488235 NLRP1Q9C000 1473 aa17.56■□□□□ 0.4
PCYT1A-215ENST00000488235 CHIC2Q9UKJ5 165 aa17.56■□□□□ 0.4
PCYT1A-215ENST00000488235 UGGT1Q9NYU2 1555 aa17.55■□□□□ 0.4
PCYT1A-215ENST00000488235 PRDM15P57071 1507 aaPredicted RBP17.55■□□□□ 0.4
PCYT1A-215ENST00000488235 ERBINQ96RT1 1412 aa17.55■□□□□ 0.4
PCYT1A-215ENST00000488235 POLR1AO95602 1720 aaPredicted RBP17.53■□□□□ 0.4
PCYT1A-215ENST00000488235 IQSEC2Q5JU85 1478 aa17.53■□□□□ 0.4
PCYT1A-215ENST00000488235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.42e-6■■■□□ 16.5
PCYT1A-215ENST00000488235 THEMISQ8N1K5 641 aaPredicted RBP17.51■□□□□ 0.39
PCYT1A-215ENST00000488235 DEPDC5O75140 1603 aa17.5■□□□□ 0.39
PCYT1A-215ENST00000488235 ANKLE2Q86XL3 938 aa17.5■□□□□ 0.39
PCYT1A-215ENST00000488235 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
PCYT1A-215ENST00000488235 MED14O60244 1454 aa17.49■□□□□ 0.39
PCYT1A-215ENST00000488235 ARHGAP31Q2M1Z3 1444 aa17.48■□□□□ 0.39
PCYT1A-215ENST00000488235 FAM50AQ14320 339 aaKnown RBP17.48■□□□□ 0.39
PCYT1A-215ENST00000488235 ANKRD30AQ9BXX3 1397 aa17.48■□□□□ 0.39
PCYT1A-215ENST00000488235 VWDEQ8N2E2 1590 aa17.48■□□□□ 0.39
PCYT1A-215ENST00000488235 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
PCYT1A-215ENST00000488235 ADGRL2O95490 1459 aa17.47■□□□□ 0.39
PCYT1A-215ENST00000488235 UBAP1LF5GYI3 381 aa17.46■□□□□ 0.39
PCYT1A-215ENST00000488235 UBR1Q8IWV7 1749 aa17.45■□□□□ 0.38
PCYT1A-215ENST00000488235 LMTK2Q8IWU2 1503 aa17.43■□□□□ 0.38
PCYT1A-215ENST00000488235 LTKP29376 864 aa17.43■□□□□ 0.38
PCYT1A-215ENST00000488235 IQGAP1P46940 1657 aa17.42■□□□□ 0.38
PCYT1A-215ENST00000488235 PPARGC1BQ86YN6 1023 aaKnown RBP17.42■□□□□ 0.38
PCYT1A-215ENST00000488235 KANK1Q14678 1352 aa17.41■□□□□ 0.38
PCYT1A-215ENST00000488235 ARHGAP23Q9P227 1491 aa17.41■□□□□ 0.38
PCYT1A-215ENST00000488235 CPS1P31327 1500 aa17.41■□□□□ 0.38
PCYT1A-215ENST00000488235 SYNMO15061 1565 aa17.4■□□□□ 0.38
PCYT1A-215ENST00000488235 PIK3C2BO00750 1634 aa17.4■□□□□ 0.38
PCYT1A-215ENST00000488235 STRCP1A6NGW2 1772 aa17.4■□□□□ 0.38
PCYT1A-215ENST00000488235 ANKRD50Q9ULJ7 1429 aa17.39■□□□□ 0.38
PCYT1A-215ENST00000488235 SCAF11Q99590 1463 aaKnown RBP17.39■□□□□ 0.37
PCYT1A-215ENST00000488235 SLIT1O75093 1534 aa17.39■□□□□ 0.37
PCYT1A-215ENST00000488235 EFCAB6Q5THR3 1501 aa17.39■□□□□ 0.37
PCYT1A-215ENST00000488235 IDI1Q13907 227 aa17.38■□□□□ 0.37
PCYT1A-215ENST00000488235 NOS1P29475 1434 aa17.38■□□□□ 0.37
PCYT1A-215ENST00000488235 ALKQ9UM73 1620 aa17.37■□□□□ 0.37
PCYT1A-215ENST00000488235 TXNDC2Q86VQ3 553 aa17.37■□□□□ 0.37
PCYT1A-215ENST00000488235 DISP3Q9P2K9 1392 aa17.37■□□□□ 0.37
PCYT1A-215ENST00000488235 TMEM2Q9UHN6 1383 aa17.36■□□□□ 0.37
PCYT1A-215ENST00000488235 ILDR2Q71H61 639 aa17.35■□□□□ 0.37
PCYT1A-215ENST00000488235 PIP4K2BP78356 416 aa17.34■□□□□ 0.37
PCYT1A-215ENST00000488235 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
PCYT1A-215ENST00000488235 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
PCYT1A-215ENST00000488235 HSPA1LP34931 641 aa17.31■□□□□ 0.36
PCYT1A-215ENST00000488235 ITGAEP38570 1179 aa17.31■□□□□ 0.36
PCYT1A-215ENST00000488235 ROCK1Q13464 1354 aa17.3■□□□□ 0.36
PCYT1A-215ENST00000488235 STAG3Q9UJ98 1225 aa17.3■□□□□ 0.36
PCYT1A-215ENST00000488235 UNC13BO14795 1591 aa17.3■□□□□ 0.36
PCYT1A-215ENST00000488235 ADGRB3O60242 1522 aa17.3■□□□□ 0.36
PCYT1A-215ENST00000488235 TOM1O60784 492 aa17.29■□□□□ 0.36
PCYT1A-215ENST00000488235 EID1Q9Y6B2 187 aa17.29■□□□□ 0.36
PCYT1A-215ENST00000488235 RPRD2Q5VT52 1461 aaKnown RBP17.28■□□□□ 0.36
PCYT1A-215ENST00000488235 TET3O43151 1660 aa17.28■□□□□ 0.36
PCYT1A-215ENST00000488235 KDM5AP29375 1690 aaKnown RBP17.28■□□□□ 0.36
PCYT1A-215ENST00000488235 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
PCYT1A-215ENST00000488235 SLC52A1Q9NWF4 448 aa17.26■□□□□ 0.35
PCYT1A-215ENST00000488235 SLC26A8Q96RN1 970 aa17.25■□□□□ 0.35
PCYT1A-215ENST00000488235 E9PCH4 1651 aa17.23■□□□□ 0.35
PCYT1A-215ENST00000488235 ZFYVE9O95405 1425 aa17.23■□□□□ 0.35
PCYT1A-215ENST00000488235 XIRP1Q702N8 1843 aaKnown RBP17.23■□□□□ 0.35
PCYT1A-215ENST00000488235 GCC2Q8IWJ2 1684 aa17.23■□□□□ 0.35
PCYT1A-215ENST00000488235 TMEM131LA2VDJ0 1609 aa17.22■□□□□ 0.35
PCYT1A-215ENST00000488235 IQGAP3Q86VI3 1631 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms