RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 NPM2Q86SE8 214 aaKnown RBP21.88■■□□□ 1.09
GCOM1-210ENST00000488175 RGL3Q3MIN7 710 aa21.86■■□□□ 1.09
GCOM1-210ENST00000488175 CDCA7LQ96GN5 454 aa21.85■■□□□ 1.09
GCOM1-210ENST00000488175 CROCC2H7BZ55 1655 aa21.85■■□□□ 1.09
GCOM1-210ENST00000488175 NBPF1Q3BBV0 1214 aa21.84■■□□□ 1.09
GCOM1-210ENST00000488175 NLRP13Q86W25 1043 aa21.84■■□□□ 1.09
GCOM1-210ENST00000488175 ARHGEF12Q9NZN5 1544 aa21.83■■□□□ 1.09
GCOM1-210ENST00000488175 KTN1Q86UP2 1357 aaKnown RBP21.82■■□□□ 1.08
GCOM1-210ENST00000488175 CARMIL2Q6F5E8 1435 aa21.81■■□□□ 1.08
GCOM1-210ENST00000488175 EIF4G3O43432 1585 aaKnown RBP21.81■■□□□ 1.08
GCOM1-210ENST00000488175 CC2D1BQ5T0F9 858 aaKnown RBP21.8■■□□□ 1.08
GCOM1-210ENST00000488175 CEP170Q5SW79 1584 aa21.8■■□□□ 1.08
GCOM1-210ENST00000488175 ADCY10Q96PN6 1610 aa21.8■■□□□ 1.08
GCOM1-210ENST00000488175 PLIN1O60240 522 aa21.79■■□□□ 1.08
GCOM1-210ENST00000488175 RTL5Q5HYW3 569 aaPredicted RBP21.79■■□□□ 1.08
GCOM1-210ENST00000488175 PER1O15534 1290 aaPredicted RBP21.78■■□□□ 1.08
GCOM1-210ENST00000488175 ABCC10Q5T3U5 1492 aa21.78■■□□□ 1.08
GCOM1-210ENST00000488175 MAGI1Q96QZ7 1491 aaPredicted RBP21.78■■□□□ 1.08
GCOM1-210ENST00000488175 PDE4AP27815 886 aa21.77■■□□□ 1.08
GCOM1-210ENST00000488175 PARD3Q8TEW0 1356 aa21.77■■□□□ 1.08
GCOM1-210ENST00000488175 TCERG1O14776 1098 aaKnown RBP21.77■■□□□ 1.08
GCOM1-210ENST00000488175 ATP10BO94823 1461 aa21.77■■□□□ 1.08
GCOM1-210ENST00000488175 SHANK2Q9UPX8 1470 aa21.77■■□□□ 1.07
GCOM1-210ENST00000488175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.76■■□□□ 1.07
GCOM1-210ENST00000488175 PDE3BQ13370 1112 aa21.75■■□□□ 1.07
GCOM1-210ENST00000488175 SKAP1Q86WV1 359 aa21.75■■□□□ 1.07
GCOM1-210ENST00000488175 PTPRGP23470 1445 aa21.75■■□□□ 1.07
GCOM1-210ENST00000488175 CDC42BPAQ5VT25 1732 aa21.75■■□□□ 1.07
GCOM1-210ENST00000488175 SYNJ2O15056 1496 aa21.74■■□□□ 1.07
GCOM1-210ENST00000488175 KDM5DQ9BY66 1539 aa21.73■■□□□ 1.07
GCOM1-210ENST00000488175 PRAG1Q86YV5 1406 aa21.73■■□□□ 1.07
GCOM1-210ENST00000488175 CCDC144AA2RUR9 1427 aa21.72■■□□□ 1.07
GCOM1-210ENST00000488175 PANK3Q9H999 370 aa21.72■■□□□ 1.07
GCOM1-210ENST00000488175 BACH2Q9BYV9 841 aa21.71■■□□□ 1.07
GCOM1-210ENST00000488175 LAS1LQ9Y4W2 734 aaKnown RBP21.7■■□□□ 1.06
GCOM1-210ENST00000488175 DISP3Q9P2K9 1392 aa21.7■■□□□ 1.06
GCOM1-210ENST00000488175 TESK2Q96S53 571 aa21.69■■□□□ 1.06
GCOM1-210ENST00000488175 FAM135AQ9P2D6 1515 aa21.69■■□□□ 1.06
GCOM1-210ENST00000488175 E9PCH4 1651 aa21.68■■□□□ 1.06
GCOM1-210ENST00000488175 CRBNQ96SW2 442 aa21.68■■□□□ 1.06
GCOM1-210ENST00000488175 ABCA8O94911 1581 aa21.66■■□□□ 1.06
GCOM1-210ENST00000488175 NUP160Q12769 1436 aa21.66■■□□□ 1.06
GCOM1-210ENST00000488175 MS4A1P11836 297 aa21.64■■□□□ 1.06
GCOM1-210ENST00000488175 PLA2R1Q13018 1463 aa21.64■■□□□ 1.05
GCOM1-210ENST00000488175 C20orf194Q5TEA3 1177 aa21.63■■□□□ 1.05
GCOM1-210ENST00000488175 CCDC141Q6ZP82 1450 aa21.62■■□□□ 1.05
GCOM1-210ENST00000488175 NEFMP07197 916 aa21.61■■□□□ 1.05
GCOM1-210ENST00000488175 A2MP01023 1474 aa21.61■■□□□ 1.05
GCOM1-210ENST00000488175 ADAMTS8Q9UP79 889 aa21.61■■□□□ 1.05
GCOM1-210ENST00000488175 TRPM1Q7Z4N2 1603 aa21.61■■□□□ 1.05
GCOM1-210ENST00000488175 ERCC6Q03468 1493 aa21.61■■□□□ 1.05
GCOM1-210ENST00000488175 GPRASP1Q5JY77 1395 aa21.61■■□□□ 1.05
GCOM1-210ENST00000488175 WASHC2CQ9Y4E1 1318 aa21.6■■□□□ 1.05
GCOM1-210ENST00000488175 COL17A1Q9UMD9 1497 aaPredicted RBP21.6■■□□□ 1.05
GCOM1-210ENST00000488175 TMF1P82094 1093 aa21.6■■□□□ 1.05
GCOM1-210ENST00000488175 ERBINQ96RT1 1412 aa21.59■■□□□ 1.05
GCOM1-210ENST00000488175 ARHGEF5Q12774 1597 aa21.59■■□□□ 1.05
GCOM1-210ENST00000488175 BLMP54132 1417 aaPredicted RBP21.58■■□□□ 1.05
GCOM1-210ENST00000488175 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.04
GCOM1-210ENST00000488175 SAMD9LQ8IVG5 1584 aa21.57■■□□□ 1.04
GCOM1-210ENST00000488175 PLEKHH2Q8IVE3 1493 aa21.52■■□□□ 1.04
GCOM1-210ENST00000488175 PRDM15P57071 1507 aaPredicted RBP21.51■■□□□ 1.03
GCOM1-210ENST00000488175 SYCP2Q9BX26 1530 aa21.51■■□□□ 1.03
GCOM1-210ENST00000488175 KNSTRNQ9Y448 316 aa21.5■■□□□ 1.03
GCOM1-210ENST00000488175 PPP2R1AP30153 589 aa21.5■■□□□ 1.03
GCOM1-210ENST00000488175 SLC4A3P48751 1232 aa21.5■■□□□ 1.03
GCOM1-210ENST00000488175 WDR43Q15061 677 aaKnown RBP eCLIP21.49■■□□□ 1.03
GCOM1-210ENST00000488175 PLEKHH1Q9ULM0 1364 aa21.49■■□□□ 1.03
GCOM1-210ENST00000488175 IL27Q8NEV9 243 aa21.49■■□□□ 1.03
GCOM1-210ENST00000488175 INSRP06213 1382 aa21.48■■□□□ 1.03
GCOM1-210ENST00000488175 DUSP27Q5VZP5 1158 aa21.48■■□□□ 1.03
GCOM1-210ENST00000488175 CDC42BPBQ9Y5S2 1711 aa21.48■■□□□ 1.03
GCOM1-210ENST00000488175 ZMYM4Q5VZL5 1548 aa21.47■■□□□ 1.03
GCOM1-210ENST00000488175 PPM1GO15355 546 aaPredicted RBP21.47■■□□□ 1.03
GCOM1-210ENST00000488175 USP35Q9P2H5 1018 aa21.47■■□□□ 1.03
GCOM1-210ENST00000488175 KDM2BQ8NHM5 1336 aa21.46■■□□□ 1.03
GCOM1-210ENST00000488175 ARHGAP5Q13017 1502 aa21.46■■□□□ 1.03
GCOM1-210ENST00000488175 MAGI2Q86UL8 1455 aa21.46■■□□□ 1.03
GCOM1-210ENST00000488175 DDRGK1Q96HY6 314 aa21.44■■□□□ 1.02
GCOM1-210ENST00000488175 PREX2Q70Z35 1606 aa21.44■■□□□ 1.02
GCOM1-210ENST00000488175 AMER1Q5JTC6 1135 aaPredicted RBP21.43■■□□□ 1.02
GCOM1-210ENST00000488175 GOLGA2Q08379 1002 aa21.43■■□□□ 1.02
GCOM1-210ENST00000488175 RTN4Q9NQC3 1192 aaKnown RBP21.43■■□□□ 1.02
GCOM1-210ENST00000488175 CCDC146Q8IYE0 955 aa21.42■■□□□ 1.02
GCOM1-210ENST00000488175 CENPQQ7L2Z9 268 aaPredicted RBP21.42■■□□□ 1.02
GCOM1-210ENST00000488175 UNC13BO14795 1591 aa21.42■■□□□ 1.02
GCOM1-210ENST00000488175 WDR7Q9Y4E6 1490 aa21.42■■□□□ 1.02
GCOM1-210ENST00000488175 ZNF521Q96K83 1311 aa21.4■■□□□ 1.02
GCOM1-210ENST00000488175 LAMC1P11047 1609 aa21.39■■□□□ 1.02
GCOM1-210ENST00000488175 RGS3P49796 1198 aa21.39■■□□□ 1.01
GCOM1-210ENST00000488175 TTC37Q6PGP7 1564 aa21.38■■□□□ 1.01
GCOM1-210ENST00000488175 SPINK5Q9NQ38 1064 aaPredicted RBP21.38■■□□□ 1.01
GCOM1-210ENST00000488175 EIF2AK4Q9P2K8 1649 aaKnown RBP21.37■■□□□ 1.01
GCOM1-210ENST00000488175 C8orf34Q49A92 452 aa21.37■■□□□ 1.01
GCOM1-210ENST00000488175 DAXXQ9UER7 740 aaPredicted RBP21.37■■□□□ 1.01
GCOM1-210ENST00000488175 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.36■■□□□ 1.01
GCOM1-210ENST00000488175 SLFN5Q08AF3 891 aa21.36■■□□□ 1.01
GCOM1-210ENST00000488175 FAM161AQ3B820 660 aa21.36■■□□□ 1.01
GCOM1-210ENST00000488175 MYO5CQ9NQX4 1742 aa21.36■■□□□ 1.01
GCOM1-210ENST00000488175 NFKBIBQ15653 356 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms