RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 E2F4Q16254 413 aa7.29□□□□□ -1.24
CDC42BPA-213ENST00000488131 LARP6Q9BRS8 491 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-213ENST00000488131 FOXK1P85037 733 aa7.28□□□□□ -1.24
CDC42BPA-213ENST00000488131 MFSD10Q14728 455 aa7.28□□□□□ -1.24
CDC42BPA-213ENST00000488131 PLPP6Q8IY26 295 aa7.28□□□□□ -1.24
CDC42BPA-213ENST00000488131 PSEN2P49810 448 aa7.27□□□□□ -1.25
CDC42BPA-213ENST00000488131 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDC42BPA-213ENST00000488131 ARHGEF1Q92888 912 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-213ENST00000488131 ZCCHC6Q5VYS8 1495 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-213ENST00000488131 GPHNQ9NQX3 736 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-213ENST00000488131 PDE4AP27815 886 aa7.26□□□□□ -1.25
CDC42BPA-213ENST00000488131 TRAF7Q6Q0C0 670 aa7.25□□□□□ -1.25
CDC42BPA-213ENST00000488131 THSD4Q6ZMP0 1018 aa7.25□□□□□ -1.25
CDC42BPA-213ENST00000488131 BCL11AQ9H165 835 aa7.25□□□□□ -1.25
CDC42BPA-213ENST00000488131 KDM4FA0A1W2PPD8 638 aa7.24□□□□□ -1.25
CDC42BPA-213ENST00000488131 SEMA3EO15041 775 aa7.24□□□□□ -1.25
CDC42BPA-213ENST00000488131 LMOD2Q6P5Q4 547 aa7.24□□□□□ -1.25
CDC42BPA-213ENST00000488131 DDX27Q96GQ7 796 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-213ENST00000488131 CAMK2BQ13554 666 aa7.22□□□□□ -1.25
CDC42BPA-213ENST00000488131 TESPA1A2RU30 521 aaPredicted RBP7.21□□□□□ -1.25
CDC42BPA-213ENST00000488131 SLC4A5Q9BY07 1137 aa7.21□□□□□ -1.25
CDC42BPA-213ENST00000488131 VPS9D1Q9Y2B5 631 aa7.21□□□□□ -1.25
CDC42BPA-213ENST00000488131 GOLGA8CPA6NN73 597 aa7.21□□□□□ -1.26
CDC42BPA-213ENST00000488131 ARIH1Q9Y4X5 557 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-213ENST00000488131 ITGBL1O95965 494 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-213ENST00000488131 DSG2Q14126 1118 aa7.19□□□□□ -1.26
CDC42BPA-213ENST00000488131 KCNK17Q96T54 332 aa7.19□□□□□ -1.26
CDC42BPA-213ENST00000488131 LOC105371045A0A1W2PR82 267 aa7.18□□□□□ -1.26
CDC42BPA-213ENST00000488131 WNT2BQ93097 391 aa7.17□□□□□ -1.26
CDC42BPA-213ENST00000488131 PPP1R15BQ5SWA1 713 aa7.17□□□□□ -1.26
CDC42BPA-213ENST00000488131 FAM9AQ8IZU1 332 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-213ENST00000488131 ZNF454Q8N9F8 522 aa7.16□□□□□ -1.26
CDC42BPA-213ENST00000488131 OXER1Q8TDS5 423 aa7.16□□□□□ -1.26
CDC42BPA-213ENST00000488131 EMILIN3Q9NT22 766 aa7.16□□□□□ -1.26
CDC42BPA-213ENST00000488131 PTPREP23469 700 aa7.15□□□□□ -1.26
CDC42BPA-213ENST00000488131 DIEXFQ68CQ4 756 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-213ENST00000488131 ZC3H15Q8WU90 426 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-213ENST00000488131 BCL2L12Q9HB09 334 aa7.15□□□□□ -1.26
CDC42BPA-213ENST00000488131 BHMG1C9JSJ3 638 aaPredicted RBP7.15□□□□□ -1.27
CDC42BPA-213ENST00000488131 LCE2BO14633 110 aa7.15□□□□□ -1.27
CDC42BPA-213ENST00000488131 GFRA3O60609 400 aa7.15□□□□□ -1.27
CDC42BPA-213ENST00000488131 CLSPNQ9HAW4 1339 aa7.15□□□□□ -1.27
CDC42BPA-213ENST00000488131 ANP32EQ9BTT0 268 aa7.14□□□□□ -1.27
CDC42BPA-213ENST00000488131 MLLT3P42568 568 aaPredicted RBP7.13□□□□□ -1.27
CDC42BPA-213ENST00000488131 MRPL50Q8N5N7 158 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-213ENST00000488131 UPF1Q92900 1129 aaKnown RBP eCLIP7.13□□□□□ -1.27
CDC42BPA-213ENST00000488131 ZNF787Q6DD87 383 aa7.12□□□□□ -1.27
CDC42BPA-213ENST00000488131 DPYSL4O14531 572 aa7.11□□□□□ -1.27
CDC42BPA-213ENST00000488131 NBPF3Q9H094 633 aa7.11□□□□□ -1.27
CDC42BPA-213ENST00000488131 NRG2O14511 850 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-213ENST00000488131 FOSBP53539 338 aa7.11□□□□□ -1.27
CDC42BPA-213ENST00000488131 TULP1O00294 542 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-213ENST00000488131 ANO8Q9HCE9 1232 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-213ENST00000488131 RBM26Q5T8P6 1007 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-213ENST00000488131 NYAP1Q6ZVC0 841 aa7.09□□□□□ -1.27
CDC42BPA-213ENST00000488131 ZDHHC16Q969W1 377 aa7.09□□□□□ -1.27
CDC42BPA-213ENST00000488131 JPH4Q96JJ6 628 aa7.09□□□□□ -1.27
CDC42BPA-213ENST00000488131 ZNF775Q96BV0 537 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-213ENST00000488131 SLC24A3Q9HC58 644 aa7.08□□□□□ -1.28
CDC42BPA-213ENST00000488131 EVI5O60447 810 aa7.07□□□□□ -1.28
CDC42BPA-213ENST00000488131 ZMYND10O75800 440 aa7.07□□□□□ -1.28
CDC42BPA-213ENST00000488131 MAP3K9P80192 1104 aa7.07□□□□□ -1.28
CDC42BPA-213ENST00000488131 KCNC4Q03721 635 aa7.07□□□□□ -1.28
CDC42BPA-213ENST00000488131 ZBED2Q9BTP6 218 aa7.07□□□□□ -1.28
CDC42BPA-213ENST00000488131 PDIA6Q15084 440 aa7.06□□□□□ -1.28
CDC42BPA-213ENST00000488131 SMYD5Q6GMV2 418 aa7.06□□□□□ -1.28
CDC42BPA-213ENST00000488131 BRPF1P55201 1214 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-213ENST00000488131 ERICH6Q7L0X2 663 aa7.05□□□□□ -1.28
CDC42BPA-213ENST00000488131 ANKK1Q8NFD2 765 aa7.04□□□□□ -1.28
CDC42BPA-213ENST00000488131 SPDYE16A6NNV3 312 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-213ENST00000488131 BARGINQ6ZT62 677 aa7.03□□□□□ -1.28
CDC42BPA-213ENST00000488131 PPP1R3GB7ZBB8 358 aa7.02□□□□□ -1.29
CDC42BPA-213ENST00000488131 LAPTM4BQ86VI4 370 aa7.02□□□□□ -1.29
CDC42BPA-213ENST00000488131 FBXW7Q969H0 707 aa7.02□□□□□ -1.29
CDC42BPA-213ENST00000488131 ADAM33Q9BZ11 813 aa7.02□□□□□ -1.29
CDC42BPA-213ENST00000488131 RABGEF1Q9UJ41 708 aa7.02□□□□□ -1.29
CDC42BPA-213ENST00000488131 CCER1Q8TC90 406 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-213ENST00000488131 TMEM132AQ24JP5 1023 aa7□□□□□ -1.29
CDC42BPA-213ENST00000488131 GPR37O15354 613 aa7□□□□□ -1.29
CDC42BPA-213ENST00000488131 ONECUT3O60422 494 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-213ENST00000488131 TYW1BQ6NUM6 668 aa7□□□□□ -1.29
CDC42BPA-213ENST00000488131 GPIHBP1Q8IV16 184 aa7□□□□□ -1.29
CDC42BPA-213ENST00000488131 GRXCR2A6NFK2 248 aa6.98□□□□□ -1.29
CDC42BPA-213ENST00000488131 SUPT16HQ9Y5B9 1047 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-213ENST00000488131 ABCC9O60706 1549 aa6.97□□□□□ -1.29
CDC42BPA-213ENST00000488131 PHF14O94880 888 aa6.97□□□□□ -1.29
CDC42BPA-213ENST00000488131 OSBPP22059 807 aa6.97□□□□□ -1.29
CDC42BPA-213ENST00000488131 PRIM1P49642 420 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-213ENST00000488131 NEUROD2Q15784 382 aa6.97□□□□□ -1.29
CDC42BPA-213ENST00000488131 EPAS1Q99814 870 aa6.97□□□□□ -1.29
CDC42BPA-213ENST00000488131 V9GY48 417 aaPredicted RBP6.96□□□□□ -1.29
CDC42BPA-213ENST00000488131 PCDHGA10Q9Y5H3 936 aa6.96□□□□□ -1.3
CDC42BPA-213ENST00000488131 SOWAHBA6NEL2 793 aa6.95□□□□□ -1.3
CDC42BPA-213ENST00000488131 DDX12PQ92771 950 aa6.94□□□□□ -1.3
CDC42BPA-213ENST00000488131 PRKD2Q9BZL6 878 aa6.94□□□□□ -1.3
CDC42BPA-213ENST00000488131 WRNQ14191 1432 aaPredicted RBP eCLIP6.94□□□□□ -1.3
CDC42BPA-213ENST00000488131 AK7Q96M32 723 aa6.94□□□□□ -1.3
CDC42BPA-213ENST00000488131 TIMELESSQ9UNS1 1208 aa6.94□□□□□ -1.3
CDC42BPA-213ENST00000488131 YTHDC1Q96MU7 727 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-213ENST00000488131 KIAA1468Q9P260 1216 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms