RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 ABCC5O15440 1437 aa18.68■□□□□ 0.58
SFXN3-206ENST00000487721 DAPK1P53355 1430 aa18.66■□□□□ 0.58
SFXN3-206ENST00000487721 CHIC2Q9UKJ5 165 aa18.66■□□□□ 0.58
SFXN3-206ENST00000487721 PLXNC1O60486 1568 aa18.66■□□□□ 0.58
SFXN3-206ENST00000487721 ADGBQ8N7X0 1667 aa18.66■□□□□ 0.58
SFXN3-206ENST00000487721 SHANK2Q9UPX8 1470 aa18.65■□□□□ 0.58
SFXN3-206ENST00000487721 MAST1Q9Y2H9 1570 aa18.65■□□□□ 0.58
SFXN3-206ENST00000487721 RRP7BPQ9NSQ0 103 aa18.65■□□□□ 0.58
SFXN3-206ENST00000487721 ANKRD30AQ9BXX3 1397 aa18.65■□□□□ 0.58
SFXN3-206ENST00000487721 PKD2Q13563 968 aa18.64■□□□□ 0.57
SFXN3-206ENST00000487721 PTPRKQ15262 1439 aa18.64■□□□□ 0.57
SFXN3-206ENST00000487721 CAMSAP1Q5T5Y3 1602 aa18.63■□□□□ 0.57
SFXN3-206ENST00000487721 MROH2AA6NES4 1674 aa18.63■□□□□ 0.57
SFXN3-206ENST00000487721 KIF15Q9NS87 1388 aa18.63■□□□□ 0.57
SFXN3-206ENST00000487721 WASHC2CQ9Y4E1 1318 aa18.62■□□□□ 0.57
SFXN3-206ENST00000487721 LTBP4Q8N2S1 1624 aa18.62■□□□□ 0.57
SFXN3-206ENST00000487721 DISP3Q9P2K9 1392 aa18.6■□□□□ 0.57
SFXN3-206ENST00000487721 DNMT1P26358 1616 aaKnown RBP18.6■□□□□ 0.57
SFXN3-206ENST00000487721 ZNF335Q9H4Z2 1342 aaPredicted RBP18.59■□□□□ 0.57
SFXN3-206ENST00000487721 CLTCQ00610 1675 aaKnown RBP18.59■□□□□ 0.57
SFXN3-206ENST00000487721 DUOX2Q9NRD8 1548 aa18.59■□□□□ 0.57
SFXN3-206ENST00000487721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.57■□□□□ 0.56
SFXN3-206ENST00000487721 ITGAEP38570 1179 aa18.57■□□□□ 0.56
SFXN3-206ENST00000487721 FBXO31Q5XUX0 539 aaPredicted RBP18.57■□□□□ 0.56
SFXN3-206ENST00000487721 PLA2R1Q13018 1463 aa18.56■□□□□ 0.56
SFXN3-206ENST00000487721 IQSEC2Q5JU85 1478 aa18.56■□□□□ 0.56
SFXN3-206ENST00000487721 ERBINQ96RT1 1412 aa18.56■□□□□ 0.56
SFXN3-206ENST00000487721 ILDR2Q71H61 639 aa18.55■□□□□ 0.56
SFXN3-206ENST00000487721 UBAP1LF5GYI3 381 aa18.53■□□□□ 0.56
SFXN3-206ENST00000487721 CEP170BQ9Y4F5 1589 aaPredicted RBP18.53■□□□□ 0.56
SFXN3-206ENST00000487721 FAM135AQ9P2D6 1515 aa18.53■□□□□ 0.56
SFXN3-206ENST00000487721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.56
SFXN3-206ENST00000487721 KANK1Q14678 1352 aa18.52■□□□□ 0.55
SFXN3-206ENST00000487721 ADGRL2O95490 1459 aa18.52■□□□□ 0.55
SFXN3-206ENST00000487721 CROCC2H7BZ55 1655 aa18.51■□□□□ 0.55
SFXN3-206ENST00000487721 MYO3AQ8NEV4 1616 aa18.51■□□□□ 0.55
SFXN3-206ENST00000487721 A2ML1A8K2U0 1454 aa18.51■□□□□ 0.55
SFXN3-206ENST00000487721 KDM5DQ9BY66 1539 aa18.5■□□□□ 0.55
SFXN3-206ENST00000487721 ROCK1Q13464 1354 aa18.5■□□□□ 0.55
SFXN3-206ENST00000487721 TNRQ92752 1358 aa18.5■□□□□ 0.55
SFXN3-206ENST00000487721 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
SFXN3-206ENST00000487721 EIF2AK4Q9P2K8 1649 aaKnown RBP18.49■□□□□ 0.55
SFXN3-206ENST00000487721 ZNF142P52746 1687 aaPredicted RBP18.48■□□□□ 0.55
SFXN3-206ENST00000487721 ANKRD50Q9ULJ7 1429 aa18.48■□□□□ 0.55
SFXN3-206ENST00000487721 ANKLE2Q86XL3 938 aa18.47■□□□□ 0.55
SFXN3-206ENST00000487721 THEMISQ8N1K5 641 aaPredicted RBP18.47■□□□□ 0.55
SFXN3-206ENST00000487721 SOCS7O14512 581 aa18.45■□□□□ 0.54
SFXN3-206ENST00000487721 PZPP20742 1482 aa18.45■□□□□ 0.54
SFXN3-206ENST00000487721 RNF17Q9BXT8 1623 aaKnown RBP18.45■□□□□ 0.54
SFXN3-206ENST00000487721 ABCC3O15438 1527 aa18.42■□□□□ 0.54
SFXN3-206ENST00000487721 TOM1O60784 492 aa18.39■□□□□ 0.53
SFXN3-206ENST00000487721 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.53
SFXN3-206ENST00000487721 PIP4K2BP78356 416 aa18.38■□□□□ 0.53
SFXN3-206ENST00000487721 NLRP1Q9C000 1473 aa18.38■□□□□ 0.53
SFXN3-206ENST00000487721 ZC3H13Q5T200 1668 aaKnown RBP18.38■□□□□ 0.53
SFXN3-206ENST00000487721 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
SFXN3-206ENST00000487721 ARHGAP31Q2M1Z3 1444 aa18.36■□□□□ 0.53
SFXN3-206ENST00000487721 SPATA31D1Q6ZQQ2 1576 aa18.36■□□□□ 0.53
SFXN3-206ENST00000487721 MROH1Q8NDA8 1641 aa18.36■□□□□ 0.53
SFXN3-206ENST00000487721 UGGT1Q9NYU2 1555 aa18.35■□□□□ 0.53
SFXN3-206ENST00000487721 HSPA1LP34931 641 aa18.34■□□□□ 0.53
SFXN3-206ENST00000487721 NEURL4Q96JN8 1562 aa18.34■□□□□ 0.53
SFXN3-206ENST00000487721 CPS1P31327 1500 aa18.33■□□□□ 0.53
SFXN3-206ENST00000487721 NPHP4O75161 1426 aaPredicted RBP18.33■□□□□ 0.53
SFXN3-206ENST00000487721 DEPDC5O75140 1603 aa18.33■□□□□ 0.52
SFXN3-206ENST00000487721 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.52
SFXN3-206ENST00000487721 NUP155O75694 1391 aa18.32■□□□□ 0.52
SFXN3-206ENST00000487721 MED14O60244 1454 aa18.32■□□□□ 0.52
SFXN3-206ENST00000487721 ERVK-7P63135 1459 aa18.32■□□□□ 0.52
SFXN3-206ENST00000487721 STAG3Q9UJ98 1225 aa18.29■□□□□ 0.52
SFXN3-206ENST00000487721 VWDEQ8N2E2 1590 aa18.29■□□□□ 0.52
SFXN3-206ENST00000487721 NAIPQ13075 1403 aa18.28■□□□□ 0.52
SFXN3-206ENST00000487721 POLR1AO95602 1720 aaPredicted RBP18.28■□□□□ 0.52
SFXN3-206ENST00000487721 HFM1A2PYH4 1435 aa18.27■□□□□ 0.52
SFXN3-206ENST00000487721 SLC52A1Q9NWF4 448 aa18.27■□□□□ 0.52
SFXN3-206ENST00000487721 CEP152O94986 1710 aa18.26■□□□□ 0.51
SFXN3-206ENST00000487721 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
SFXN3-206ENST00000487721 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
SFXN3-206ENST00000487721 TXNDC2Q86VQ3 553 aa18.25■□□□□ 0.51
SFXN3-206ENST00000487721 EFCAB6Q5THR3 1501 aa18.24■□□□□ 0.51
SFXN3-206ENST00000487721 LTKP29376 864 aa18.24■□□□□ 0.51
SFXN3-206ENST00000487721 ACIN1Q9UKV3 1341 aaKnown RBP18.23■□□□□ 0.51
SFXN3-206ENST00000487721 UNC13BO14795 1591 aa18.23■□□□□ 0.51
SFXN3-206ENST00000487721 IDI1Q13907 227 aa18.22■□□□□ 0.51
SFXN3-206ENST00000487721 EID1Q9Y6B2 187 aa18.22■□□□□ 0.51
SFXN3-206ENST00000487721 NOS1P29475 1434 aa18.21■□□□□ 0.51
SFXN3-206ENST00000487721 LRRC7Q96NW7 1537 aa18.19■□□□□ 0.5
SFXN3-206ENST00000487721 IQGAP1P46940 1657 aa18.19■□□□□ 0.5
SFXN3-206ENST00000487721 SCAF11Q99590 1463 aaKnown RBP18.18■□□□□ 0.5
SFXN3-206ENST00000487721 TET3O43151 1660 aa18.18■□□□□ 0.5
SFXN3-206ENST00000487721 CFAP65Q6ZU64 1925 aaKnown RBP18.17■□□□□ 0.5
SFXN3-206ENST00000487721 IQGAP3Q86VI3 1631 aa18.17■□□□□ 0.5
SFXN3-206ENST00000487721 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
SFXN3-206ENST00000487721 HDGFP51858 240 aaKnown RBP18.16■□□□□ 0.5
SFXN3-206ENST00000487721 ARHGAP23Q9P227 1491 aa18.15■□□□□ 0.5
SFXN3-206ENST00000487721 CHGAP10645 457 aaKnown RBP18.15■□□□□ 0.5
SFXN3-206ENST00000487721 ALKQ9UM73 1620 aa18.15■□□□□ 0.5
SFXN3-206ENST00000487721 GCC2Q8IWJ2 1684 aa18.14■□□□□ 0.49
SFXN3-206ENST00000487721 UBR1Q8IWV7 1749 aa18.14■□□□□ 0.49
SFXN3-206ENST00000487721 TMEM2Q9UHN6 1383 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms