RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 NCOA1Q15788 1441 aa15.4■□□□□ 0.06
TRA2B-214ENST00000487615 PPM1GO15355 546 aaPredicted RBP15.4■□□□□ 0.06
TRA2B-214ENST00000487615 AFAP1Q8N556 730 aa15.4■□□□□ 0.06
TRA2B-214ENST00000487615 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
TRA2B-214ENST00000487615 NBR1Q14596 966 aa15.39■□□□□ 0.05
TRA2B-214ENST00000487615 STAC3Q96MF2 364 aa15.39■□□□□ 0.05
TRA2B-214ENST00000487615 KIF14Q15058 1648 aa15.38■□□□□ 0.05
TRA2B-214ENST00000487615 MLECQ14165 292 aa15.38■□□□□ 0.05
TRA2B-214ENST00000487615 STK26Q9P289 416 aa15.38■□□□□ 0.05
TRA2B-214ENST00000487615 RAPGEF6Q8TEU7 1601 aa15.37■□□□□ 0.05
TRA2B-214ENST00000487615 U2SURPO15042 1029 aaKnown RBP15.37■□□□□ 0.05
TRA2B-214ENST00000487615 NUP153P49790 1475 aaKnown RBP15.37■□□□□ 0.05
TRA2B-214ENST00000487615 CCDC141Q6ZP82 1450 aa15.36■□□□□ 0.05
TRA2B-214ENST00000487615 FRAT1Q92837 279 aaPredicted RBP15.35■□□□□ 0.05
TRA2B-214ENST00000487615 RPRD2Q5VT52 1461 aaKnown RBP15.35■□□□□ 0.05
TRA2B-214ENST00000487615 TRAK1Q9UPV9 953 aa15.35■□□□□ 0.05
TRA2B-214ENST00000487615 GPATCH8Q9UKJ3 1502 aaKnown RBP15.34■□□□□ 0.05
TRA2B-214ENST00000487615 TCOF1Q13428 1488 aaKnown RBP15.34■□□□□ 0.05
TRA2B-214ENST00000487615 WDR62O43379 1518 aa15.34■□□□□ 0.05
TRA2B-214ENST00000487615 DDRGK1Q96HY6 314 aa15.34■□□□□ 0.05
TRA2B-214ENST00000487615 FTSJ3Q8IY81 847 aaKnown RBP15.33■□□□□ 0.04
TRA2B-214ENST00000487615 KIAA0556O60303 1618 aa15.33■□□□□ 0.04
TRA2B-214ENST00000487615 SAMD9Q5K651 1589 aa15.32■□□□□ 0.04
TRA2B-214ENST00000487615 HDGFP51858 240 aaKnown RBP15.32■□□□□ 0.04
TRA2B-214ENST00000487615 GOLGA2Q08379 1002 aa15.32■□□□□ 0.04
TRA2B-214ENST00000487615 NBPF1Q3BBV0 1214 aa15.31■□□□□ 0.04
TRA2B-214ENST00000487615 NUTM2DQ5VT03 806 aaPredicted RBP15.31■□□□□ 0.04
TRA2B-214ENST00000487615 PNNQ9H307 717 aaKnown RBP15.31■□□□□ 0.04
TRA2B-214ENST00000487615 RGS3P49796 1198 aa15.3■□□□□ 0.04
TRA2B-214ENST00000487615 BRD4O60885 1362 aaPredicted RBP15.3■□□□□ 0.04
TRA2B-214ENST00000487615 PBRM1Q86U86 1689 aa15.3■□□□□ 0.04
TRA2B-214ENST00000487615 HDGFL2Q7Z4V5 671 aaPredicted RBP15.29■□□□□ 0.04
TRA2B-214ENST00000487615 VGFO15240 615 aaPredicted RBP15.29■□□□□ 0.04
TRA2B-214ENST00000487615 C11orf95C9JLR9 678 aaPredicted RBP15.28■□□□□ 0.04
TRA2B-214ENST00000487615 MYH16Q9H6N6 1097 aa15.28■□□□□ 0.04
TRA2B-214ENST00000487615 NOP58Q9Y2X3 529 aaKnown RBP15.28■□□□□ 0.04
TRA2B-214ENST00000487615 U2AF1L5P0DN76 240 aaPredicted RBP15.28■□□□□ 0.04
TRA2B-214ENST00000487615 U2AF1Q01081 240 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRA2B-214ENST00000487615 CCDC146Q8IYE0 955 aa15.27■□□□□ 0.04
TRA2B-214ENST00000487615 MS4A1P11836 297 aa15.27■□□□□ 0.03
TRA2B-214ENST00000487615 CCDC184Q52MB2 194 aa15.27■□□□□ 0.03
TRA2B-214ENST00000487615 EIF4G3O43432 1585 aaKnown RBP15.27■□□□□ 0.03
TRA2B-214ENST00000487615 ATP10BO94823 1461 aa15.26■□□□□ 0.03
TRA2B-214ENST00000487615 LAS1LQ9Y4W2 734 aaKnown RBP15.26■□□□□ 0.03
TRA2B-214ENST00000487615 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
TRA2B-214ENST00000487615 HSP90AA1P07900 732 aaKnown RBP15.26■□□□□ 0.03
TRA2B-214ENST00000487615 TERF2IPQ9NYB0 399 aa15.25■□□□□ 0.03
TRA2B-214ENST00000487615 CYB5RLQ6IPT4 315 aa15.25■□□□□ 0.03
TRA2B-214ENST00000487615 SCAPERQ9BY12 1400 aa15.25■□□□□ 0.03
TRA2B-214ENST00000487615 TARBP1Q13395 1621 aaKnown RBP15.25■□□□□ 0.03
TRA2B-214ENST00000487615 TCERG1O14776 1098 aaKnown RBP15.24■□□□□ 0.03
TRA2B-214ENST00000487615 RRP1P56182 461 aaKnown RBP15.24■□□□□ 0.03
TRA2B-214ENST00000487615 DISP1Q96F81 1524 aa15.24■□□□□ 0.03
TRA2B-214ENST00000487615 C14orf37Q86TY3 774 aa15.23■□□□□ 0.03
TRA2B-214ENST00000487615 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
TRA2B-214ENST00000487615 BECN1Q14457 450 aa15.22■□□□□ 0.03
TRA2B-214ENST00000487615 EVC2Q86UK5 1308 aa15.22■□□□□ 0.03
TRA2B-214ENST00000487615 CFAP70Q5T0N1 1121 aa15.21■□□□□ 0.03
TRA2B-214ENST00000487615 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.03
TRA2B-214ENST00000487615 CGNL1Q0VF96 1302 aa15.2■□□□□ 0.02
TRA2B-214ENST00000487615 NUP160Q12769 1436 aa15.18■□□□□ 0.02
TRA2B-214ENST00000487615 EXOC6Q8TAG9 804 aa15.18■□□□□ 0.02
TRA2B-214ENST00000487615 CHMP4BQ9H444 224 aaKnown RBP15.17■□□□□ 0.02
TRA2B-214ENST00000487615 APAF1O14727 1248 aa15.17■□□□□ 0.02
TRA2B-214ENST00000487615 ERBINQ96RT1 1412 aa15.17■□□□□ 0.02
TRA2B-214ENST00000487615 MAGI3Q5TCQ9 1506 aa15.17■□□□□ 0.02
TRA2B-214ENST00000487615 PLIN1O60240 522 aa15.17■□□□□ 0.02
TRA2B-214ENST00000487615 DNMT1P26358 1616 aaKnown RBP15.16■□□□□ 0.02
TRA2B-214ENST00000487615 NGEFQ8N5V2 710 aa15.15■□□□□ 0.02
TRA2B-214ENST00000487615 E9PSI1 815 aa15.15■□□□□ 0.02
TRA2B-214ENST00000487615 ZBTB7CA1YPR0 619 aa15.14■□□□□ 0.01
TRA2B-214ENST00000487615 ADAMTS8Q9UP79 889 aa15.13■□□□□ 0.01
TRA2B-214ENST00000487615 RRP7AQ9Y3A4 280 aaKnown RBP15.13■□□□□ 0.01
TRA2B-214ENST00000487615 TMEM132EQ6IEE7 984 aa15.13■□□□□ 0.01
TRA2B-214ENST00000487615 FAM69CQ0P6D2 419 aa15.13■□□□□ 0.01
TRA2B-214ENST00000487615 PPP2R1AP30153 589 aa15.12■□□□□ 0.01
TRA2B-214ENST00000487615 MINK1Q8N4C8 1332 aaPredicted RBP15.12■□□□□ 0.01
TRA2B-214ENST00000487615 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
TRA2B-214ENST00000487615 SOX12O15370 315 aa15.11■□□□□ 0.01
TRA2B-214ENST00000487615 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
TRA2B-214ENST00000487615 CRBNQ96SW2 442 aa15.11■□□□□ 0.01
TRA2B-214ENST00000487615 CALD1Q05682 793 aaKnown RBP15.11■□□□□ 0.01
TRA2B-214ENST00000487615 SHANK2Q9UPX8 1470 aa15.11■□□□□ 0.01
TRA2B-214ENST00000487615 SMG6Q86US8 1419 aaKnown RBP15.1■□□□□ 0.01
TRA2B-214ENST00000487615 ADGRL1O94910 1474 aa15.09■□□□□ 0.01
TRA2B-214ENST00000487615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.09■□□□□ 0.014e-7■■□□□ 12.6
TRA2B-214ENST00000487615 SYCP2Q9BX26 1530 aa15.09■□□□□ 0.01
TRA2B-214ENST00000487615 CDCA7LQ96GN5 454 aa15.09■□□□□ 0.01
TRA2B-214ENST00000487615 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
TRA2B-214ENST00000487615 RWDD1Q9H446 243 aaPredicted RBP15.09■□□□□ 0.01
TRA2B-214ENST00000487615 SMC4Q9NTJ3 1288 aa15.09■□□□□ 0.01
TRA2B-214ENST00000487615 IPO9Q96P70 1041 aaKnown RBP15.08■□□□□ 0.01
TRA2B-214ENST00000487615 PLCH2O75038 1416 aa15.08■□□□□ 0
TRA2B-214ENST00000487615 PZPP20742 1482 aa15.08■□□□□ 0
TRA2B-214ENST00000487615 RALGAPBQ86X10 1494 aa15.08■□□□□ 0
TRA2B-214ENST00000487615 CENPQQ7L2Z9 268 aaPredicted RBP15.08■□□□□ 0
TRA2B-214ENST00000487615 CLUAP1Q96AJ1 413 aa15.08■□□□□ 0
TRA2B-214ENST00000487615 FANCIQ9NVI1 1328 aa15.08■□□□□ 0
TRA2B-214ENST00000487615 TRHP20396 242 aaPredicted RBP15.07■□□□□ 0
TRA2B-214ENST00000487615 PMFBP1Q8TBY8 1022 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms