RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 VWDEQ8N2E2 1590 aa8.4□□□□□ -1.06
SF1-217ENST00000486960 EFCAB5A4FU69 1503 aa8.4□□□□□ -1.06
SF1-217ENST00000486960 FHOD3Q2V2M9 1422 aa8.4□□□□□ -1.06
SF1-217ENST00000486960 PDIA4P13667 645 aaKnown RBP8.4□□□□□ -1.06
SF1-217ENST00000486960 SPINK5Q9NQ38 1064 aaPredicted RBP8.4□□□□□ -1.06
SF1-217ENST00000486960 RNF17Q9BXT8 1623 aaKnown RBP8.4□□□□□ -1.07
SF1-217ENST00000486960 BIVM-ERCC5R4GMW8 1640 aa8.4□□□□□ -1.07
SF1-217ENST00000486960 XIRP1Q702N8 1843 aaKnown RBP8.39□□□□□ -1.07
SF1-217ENST00000486960 SLC34A2O95436 690 aa8.39□□□□□ -1.07
SF1-217ENST00000486960 NEURL4Q96JN8 1562 aa8.39□□□□□ -1.07
SF1-217ENST00000486960 SHANK2Q9UPX8 1470 aa8.38□□□□□ -1.07
SF1-217ENST00000486960 POLR1AO95602 1720 aaPredicted RBP8.38□□□□□ -1.07
SF1-217ENST00000486960 CHMP4AQ9BY43 222 aa8.38□□□□□ -1.07
SF1-217ENST00000486960 ZNF219Q9P2Y4 722 aaPredicted RBP8.38□□□□□ -1.07
SF1-217ENST00000486960 IQGAP2Q13576 1575 aa8.38□□□□□ -1.07
SF1-217ENST00000486960 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
SF1-217ENST00000486960 DENND4BO75064 1496 aaPredicted RBP8.37□□□□□ -1.07
SF1-217ENST00000486960 PLA2R1Q13018 1463 aa8.37□□□□□ -1.07
SF1-217ENST00000486960 RAPGEF2Q9Y4G8 1499 aa8.37□□□□□ -1.07
SF1-217ENST00000486960 TRAPPC8Q9Y2L5 1435 aa8.37□□□□□ -1.07
SF1-217ENST00000486960 MYO3AQ8NEV4 1616 aa8.36□□□□□ -1.07
SF1-217ENST00000486960 ABCA8O94911 1581 aa8.36□□□□□ -1.07
SF1-217ENST00000486960 IGSF3O75054 1194 aa8.36□□□□□ -1.07
SF1-217ENST00000486960 ZMYND15Q9H091 742 aa8.36□□□□□ -1.07
SF1-217ENST00000486960 SENP3-EIF4A1A0A087X0R7 540 aa8.35□□□□□ -1.07
SF1-217ENST00000486960 VASPP50552 380 aaPredicted RBP8.35□□□□□ -1.07
SF1-217ENST00000486960 PUS7Q96PZ0 661 aaKnown RBP8.35□□□□□ -1.07
SF1-217ENST00000486960 ARID3AQ99856 593 aa8.35□□□□□ -1.07
SF1-217ENST00000486960 LRP6O75581 1613 aa8.34□□□□□ -1.07
SF1-217ENST00000486960 BRPF1P55201 1214 aaPredicted RBP8.34□□□□□ -1.07
SF1-217ENST00000486960 ZRANB1Q9UGI0 708 aa8.34□□□□□ -1.07
SF1-217ENST00000486960 YY1P25490 414 aa8.33□□□□□ -1.08
SF1-217ENST00000486960 IFNLR1Q8IU57 520 aaPredicted RBP8.32□□□□□ -1.08
SF1-217ENST00000486960 CDK12Q9NYV4 1490 aaPredicted RBP8.32□□□□□ -1.08
SF1-217ENST00000486960 CEP170BQ9Y4F5 1589 aaPredicted RBP8.31□□□□□ -1.08
SF1-217ENST00000486960 RGS12O14924 1447 aa8.31□□□□□ -1.08
SF1-217ENST00000486960 BRD2P25440 801 aaKnown RBP8.31□□□□□ -1.08
SF1-217ENST00000486960 C9orf84Q5VXU9 1444 aa8.3□□□□□ -1.08
SF1-217ENST00000486960 UTRNP46939 3433 aa8.29□□□□□ -1.08
SF1-217ENST00000486960 UBE2Q2Q8WVN8 375 aa8.29□□□□□ -1.08
SF1-217ENST00000486960 ATP10AO60312 1499 aa8.29□□□□□ -1.08
SF1-217ENST00000486960 MAGI2Q86UL8 1455 aa8.29□□□□□ -1.08
SF1-217ENST00000486960 ROBO1Q9Y6N7 1651 aa8.29□□□□□ -1.08
SF1-217ENST00000486960 UGGT2Q9NYU1 1516 aa8.28□□□□□ -1.08
SF1-217ENST00000486960 SYNMO15061 1565 aa8.27□□□□□ -1.09
SF1-217ENST00000486960 ABCB7O75027 752 aa8.27□□□□□ -1.09
SF1-217ENST00000486960 ECM2O94769 699 aaPredicted RBP8.27□□□□□ -1.09
SF1-217ENST00000486960 ATF5Q9Y2D1 282 aaPredicted RBP8.27□□□□□ -1.09
SF1-217ENST00000486960 NHSL1Q5SYE7 1610 aa8.27□□□□□ -1.09
SF1-217ENST00000486960 MROH2AA6NES4 1674 aa8.26□□□□□ -1.09
SF1-217ENST00000486960 DNMT1P26358 1616 aaKnown RBP8.25□□□□□ -1.09
SF1-217ENST00000486960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.25□□□□□ -1.097e-7■□□□□ 8.7
SF1-217ENST00000486960 PHLPP1O60346 1717 aa8.25□□□□□ -1.09
SF1-217ENST00000486960 CFAP74Q9C0B2 1584 aa8.24□□□□□ -1.09
SF1-217ENST00000486960 DSG3P32926 999 aa8.24□□□□□ -1.09
SF1-217ENST00000486960 NECTIN2Q92692 538 aa8.24□□□□□ -1.09
SF1-217ENST00000486960 ATP10BO94823 1461 aa8.24□□□□□ -1.09
SF1-217ENST00000486960 DIP2CQ9Y2E4 1556 aa8.23□□□□□ -1.09
SF1-217ENST00000486960 NPATQ14207 1427 aa8.23□□□□□ -1.09
SF1-217ENST00000486960 ARID3CA6NKF2 412 aa8.23□□□□□ -1.09
SF1-217ENST00000486960 POLA2Q14181 598 aa8.23□□□□□ -1.09
SF1-217ENST00000486960 NEUROD2Q15784 382 aa8.23□□□□□ -1.09
SF1-217ENST00000486960 IGF1RP08069 1367 aa8.22□□□□□ -1.09
SF1-217ENST00000486960 ABCA6Q8N139 1617 aa8.22□□□□□ -1.09
SF1-217ENST00000486960 RXRBP28702 533 aa8.22□□□□□ -1.09
SF1-217ENST00000486960 CDK13Q14004 1512 aaKnown RBP8.22□□□□□ -1.09
SF1-217ENST00000486960 FAM135BQ49AJ0 1406 aa8.21□□□□□ -1.09
SF1-217ENST00000486960 COL16A1Q07092 1604 aaPredicted RBP8.21□□□□□ -1.1
SF1-217ENST00000486960 AGLP35573 1532 aa8.2□□□□□ -1.1
SF1-217ENST00000486960 REREQ9P2R6 1566 aa8.2□□□□□ -1.1
SF1-217ENST00000486960 KCTD17Q8N5Z5 321 aa8.2□□□□□ -1.1
SF1-217ENST00000486960 BCL9LQ86UU0 1499 aa8.19□□□□□ -1.1
SF1-217ENST00000486960 RAD21O60216 631 aa8.19□□□□□ -1.1
SF1-217ENST00000486960 KDM5CP41229 1560 aa8.18□□□□□ -1.1
SF1-217ENST00000486960 IQGAP1P46940 1657 aa8.18□□□□□ -1.1
SF1-217ENST00000486960 CLTCQ00610 1675 aaKnown RBP8.18□□□□□ -1.1
SF1-217ENST00000486960 ADGBQ8N7X0 1667 aa8.18□□□□□ -1.1
SF1-217ENST00000486960 CAMTA1Q9Y6Y1 1673 aa8.18□□□□□ -1.1
SF1-217ENST00000486960 C1QTNF8P60827 252 aa8.18□□□□□ -1.1
SF1-217ENST00000486960 ZNF772Q68DY9 489 aaPredicted RBP8.18□□□□□ -1.1
SF1-217ENST00000486960 TAF7LQ5H9L4 462 aa8.17□□□□□ -1.1
SF1-217ENST00000486960 POLR3GLQ9BT43 218 aa8.17□□□□□ -1.1
SF1-217ENST00000486960 ZC3H13Q5T200 1668 aaKnown RBP8.17□□□□□ -1.1
SF1-217ENST00000486960 NUTM2BA6NNL0 878 aaPredicted RBP8.16□□□□□ -1.1
SF1-217ENST00000486960 NUTM2EB1AL46 878 aaPredicted RBP8.16□□□□□ -1.1
SF1-217ENST00000486960 SHPRHQ149N8 1683 aa8.16□□□□□ -1.1
SF1-217ENST00000486960 NUTM2DQ5VT03 806 aaPredicted RBP8.16□□□□□ -1.1
SF1-217ENST00000486960 NUTM2AQ8IVF1 878 aaPredicted RBP8.16□□□□□ -1.1
SF1-217ENST00000486960 JCADQ9P266 1359 aa8.15□□□□□ -1.1
SF1-217ENST00000486960 ZNF784Q8NCA9 323 aaPredicted RBP8.15□□□□□ -1.1
SF1-217ENST00000486960 C1orf115Q9H7X2 142 aa8.15□□□□□ -1.1
SF1-217ENST00000486960 PCDH10Q9P2E7 1040 aa8.15□□□□□ -1.1
SF1-217ENST00000486960 ITSN2Q9NZM3 1697 aa8.14□□□□□ -1.11
SF1-217ENST00000486960 ATAD2Q6PL18 1390 aa8.14□□□□□ -1.11
SF1-217ENST00000486960 DEPDC5O75140 1603 aa8.14□□□□□ -1.11
SF1-217ENST00000486960 A2ML1A8K2U0 1454 aa8.13□□□□□ -1.11
SF1-217ENST00000486960 SCAPERQ9BY12 1400 aa8.13□□□□□ -1.11
SF1-217ENST00000486960 CHGAP10645 457 aaKnown RBP8.13□□□□□ -1.11
SF1-217ENST00000486960 PDE4CQ08493 712 aa8.13□□□□□ -1.11
SF1-217ENST00000486960 LMOD2Q6P5Q4 547 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms