RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.83□□□□□ -0.68
SNRNP40-205ENST00000486941 C6orf132Q5T0Z8 1188 aa10.82□□□□□ -0.68
SNRNP40-205ENST00000486941 FBXW7Q969H0 707 aa10.82□□□□□ -0.68
SNRNP40-205ENST00000486941 PTPN5P54829 565 aa10.81□□□□□ -0.68
SNRNP40-205ENST00000486941 THSD4Q6ZMP0 1018 aa10.81□□□□□ -0.68
SNRNP40-205ENST00000486941 STAC3Q96MF2 364 aa10.81□□□□□ -0.68
SNRNP40-205ENST00000486941 PDIA6Q15084 440 aa10.8□□□□□ -0.68
SNRNP40-205ENST00000486941 RBM33Q96EV2 1170 aaKnown RBP10.8□□□□□ -0.68
SNRNP40-205ENST00000486941 MRPL50Q8N5N7 158 aaKnown RBP10.79□□□□□ -0.68
SNRNP40-205ENST00000486941 EPAS1Q99814 870 aa10.79□□□□□ -0.68
SNRNP40-205ENST00000486941 RABGEF1Q9UJ41 708 aa10.78□□□□□ -0.68
SNRNP40-205ENST00000486941 E2F4Q16254 413 aa10.77□□□□□ -0.69
SNRNP40-205ENST00000486941 TSR1Q2NL82 804 aaKnown RBP10.77□□□□□ -0.69
SNRNP40-205ENST00000486941 WNT2BQ93097 391 aa10.77□□□□□ -0.69
SNRNP40-205ENST00000486941 KIAA1468Q9P260 1216 aa10.76□□□□□ -0.69
SNRNP40-205ENST00000486941 ARIH1Q9Y4X5 557 aaPredicted RBP10.76□□□□□ -0.69
SNRNP40-205ENST00000486941 EN1Q05925 392 aaPredicted RBP10.73□□□□□ -0.69
SNRNP40-205ENST00000486941 NBR1Q14596 966 aa10.72□□□□□ -0.69
SNRNP40-205ENST00000486941 NBPF3Q9H094 633 aa10.72□□□□□ -0.69
SNRNP40-205ENST00000486941 TSHZ2Q9NRE2 1034 aa10.72□□□□□ -0.69
SNRNP40-205ENST00000486941 SEPT9Q9UHD8 586 aaPredicted RBP10.72□□□□□ -0.69
SNRNP40-205ENST00000486941 SPDYE16A6NNV3 312 aaPredicted RBP10.71□□□□□ -0.69
SNRNP40-205ENST00000486941 TRIM6-TRIM34B2RNG4 842 aa10.71□□□□□ -0.69
SNRNP40-205ENST00000486941 C3orf80F5H4A9 247 aa10.71□□□□□ -0.69
SNRNP40-205ENST00000486941 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
SNRNP40-205ENST00000486941 TSKSQ9UJT2 592 aa10.71□□□□□ -0.69
SNRNP40-205ENST00000486941 GOLGA8CPA6NN73 597 aa10.7□□□□□ -0.7
SNRNP40-205ENST00000486941 BCAMP50895 628 aa10.7□□□□□ -0.7
SNRNP40-205ENST00000486941 ONECUT3O60422 494 aaPredicted RBP10.69□□□□□ -0.7
SNRNP40-205ENST00000486941 OSBPP22059 807 aa10.68□□□□□ -0.7
SNRNP40-205ENST00000486941 ZFRQ96KR1 1074 aaKnown RBP10.67□□□□□ -0.7
SNRNP40-205ENST00000486941 GRXCR2A6NFK2 248 aa10.66□□□□□ -0.7
SNRNP40-205ENST00000486941 MAP3K7O43318 606 aa10.66□□□□□ -0.7
SNRNP40-205ENST00000486941 LAPTM4BQ86VI4 370 aa10.66□□□□□ -0.7
SNRNP40-205ENST00000486941 SOWAHBA6NEL2 793 aa10.65□□□□□ -0.7
SNRNP40-205ENST00000486941 CDHR5Q9HBB8 845 aa10.65□□□□□ -0.7
SNRNP40-205ENST00000486941 WDR70Q9NW82 654 aa10.65□□□□□ -0.7
SNRNP40-205ENST00000486941 ANKK1Q8NFD2 765 aa10.63□□□□□ -0.71
SNRNP40-205ENST00000486941 SMAPO00193 183 aa10.62□□□□□ -0.71
SNRNP40-205ENST00000486941 IFFO2Q5TF58 517 aa10.62□□□□□ -0.71
SNRNP40-205ENST00000486941 WBP1LQ9NX94 342 aa10.62□□□□□ -0.71
SNRNP40-205ENST00000486941 CDCA7LQ96GN5 454 aa10.61□□□□□ -0.71
SNRNP40-205ENST00000486941 PRSS12P56730 875 aa10.6□□□□□ -0.71
SNRNP40-205ENST00000486941 FAM98CQ17RN3 349 aaKnown RBP10.6□□□□□ -0.71
SNRNP40-205ENST00000486941 NPDC1Q9NQX5 325 aaPredicted RBP10.6□□□□□ -0.71
SNRNP40-205ENST00000486941 KCNV2Q8TDN2 545 aa10.58□□□□□ -0.72
SNRNP40-205ENST00000486941 MLLT3P42568 568 aaPredicted RBP10.57□□□□□ -0.72
SNRNP40-205ENST00000486941 A0A0G2JS52 829 aa10.55□□□□□ -0.72
SNRNP40-205ENST00000486941 ITGBL1O95965 494 aaPredicted RBP10.55□□□□□ -0.72
SNRNP40-205ENST00000486941 PACS2Q86VP3 889 aa10.55□□□□□ -0.72
SNRNP40-205ENST00000486941 TTC13Q8NBP0 860 aa10.54□□□□□ -0.72
SNRNP40-205ENST00000486941 TATDN2Q93075 761 aa10.53□□□□□ -0.72
SNRNP40-205ENST00000486941 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.53□□□□□ -0.72
SNRNP40-205ENST00000486941 HPS5Q9UPZ3 1129 aa10.53□□□□□ -0.72
SNRNP40-205ENST00000486941 SAMD7Q7Z3H4 446 aa10.51□□□□□ -0.73
SNRNP40-205ENST00000486941 TSR3Q9UJK0 312 aaKnown RBP10.51□□□□□ -0.73
SNRNP40-205ENST00000486941 CERKQ8TCT0 537 aa10.5□□□□□ -0.73
SNRNP40-205ENST00000486941 ARHGEF1Q92888 912 aaKnown RBP10.5□□□□□ -0.73
SNRNP40-205ENST00000486941 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
SNRNP40-205ENST00000486941 PNMA3Q9UL41 463 aa10.5□□□□□ -0.73
SNRNP40-205ENST00000486941 NUDT18Q6ZVK8 323 aa10.49□□□□□ -0.73
SNRNP40-205ENST00000486941 PADI6Q6TGC4 694 aa10.48□□□□□ -0.73
SNRNP40-205ENST00000486941 NYAP1Q6ZVC0 841 aa10.46□□□□□ -0.73
SNRNP40-205ENST00000486941 RBM27Q9P2N5 1060 aaKnown RBP10.46□□□□□ -0.73
SNRNP40-205ENST00000486941 NBPF26B4DH59 902 aa10.43□□□□□ -0.74
SNRNP40-205ENST00000486941 PPP4CP60510 307 aa10.43□□□□□ -0.74
SNRNP40-205ENST00000486941 TJAP1Q5JTD0 557 aa10.43□□□□□ -0.74
SNRNP40-205ENST00000486941 EYA1Q99502 592 aa10.43□□□□□ -0.74
SNRNP40-205ENST00000486941 RGS20O76081 388 aa10.42□□□□□ -0.74
SNRNP40-205ENST00000486941 SEMA3EO15041 775 aa10.41□□□□□ -0.74
SNRNP40-205ENST00000486941 KCNC4Q03721 635 aa10.41□□□□□ -0.74
SNRNP40-205ENST00000486941 PTGDRQ13258 359 aa10.4□□□□□ -0.74
SNRNP40-205ENST00000486941 APLP1P51693 650 aa10.39□□□□□ -0.75
SNRNP40-205ENST00000486941 SWT1Q5T5J6 900 aaKnown RBP10.39□□□□□ -0.75
SNRNP40-205ENST00000486941 PLCB2Q00722 1185 aa10.37□□□□□ -0.75
SNRNP40-205ENST00000486941 FAM161AQ3B820 660 aa10.37□□□□□ -0.75
SNRNP40-205ENST00000486941 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
SNRNP40-205ENST00000486941 MTRQ99707 1265 aa10.36□□□□□ -0.75
SNRNP40-205ENST00000486941 ADGRG1Q9Y653 693 aa10.33□□□□□ -0.76
SNRNP40-205ENST00000486941 RNF40O75150 1001 aa10.32□□□□□ -0.76
SNRNP40-205ENST00000486941 NKX2-3Q8TAU0 364 aa10.32□□□□□ -0.76
SNRNP40-205ENST00000486941 NUTM2FA1L443 756 aa10.3□□□□□ -0.76
SNRNP40-205ENST00000486941 IRX2Q9BZI1 471 aaPredicted RBP10.3□□□□□ -0.76
SNRNP40-205ENST00000486941 IL21Q9HBE4 155 aa10.29□□□□□ -0.76
SNRNP40-205ENST00000486941 KDM2AQ9Y2K7 1162 aa10.29□□□□□ -0.76
SNRNP40-205ENST00000486941 TESPA1A2RU30 521 aaPredicted RBP10.28□□□□□ -0.76
SNRNP40-205ENST00000486941 RBM26Q5T8P6 1007 aaKnown RBP10.28□□□□□ -0.76
SNRNP40-205ENST00000486941 PPP1R18Q6NYC8 613 aa10.27□□□□□ -0.77
SNRNP40-205ENST00000486941 P3H3Q8IVL6 736 aa10.27□□□□□ -0.77
SNRNP40-205ENST00000486941 FECHP22830 423 aa10.26□□□□□ -0.77
SNRNP40-205ENST00000486941 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
SNRNP40-205ENST00000486941 SLF2Q8IX21 1173 aa10.26□□□□□ -0.77
SNRNP40-205ENST00000486941 TMEM134Q9H6X4 195 aa10.26□□□□□ -0.77
SNRNP40-205ENST00000486941 RCCD1A6NED2 376 aa10.25□□□□□ -0.77
SNRNP40-205ENST00000486941 GPR37O15354 613 aa10.25□□□□□ -0.77
SNRNP40-205ENST00000486941 COPS2P61201 443 aa10.25□□□□□ -0.77
SNRNP40-205ENST00000486941 FCHSD2O94868 740 aa10.23□□□□□ -0.77
SNRNP40-205ENST00000486941 SLC10A3P09131 477 aa10.23□□□□□ -0.77
SNRNP40-205ENST00000486941 DNAJB2P25686 324 aa10.23□□□□□ -0.77
SNRNP40-205ENST00000486941 LCE2BO14633 110 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms