RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 DNMT1P26358 1616 aaKnown RBP32.11■■■□□ 2.73
PHF1-208ENST00000486845 RSPH4AQ5TD94 716 aa32.11■■■□□ 2.73
PHF1-208ENST00000486845 KIF3BO15066 747 aa32.1■■■□□ 2.73
PHF1-208ENST00000486845 KDM5DQ9BY66 1539 aa32.1■■■□□ 2.73
PHF1-208ENST00000486845 TNRQ92752 1358 aa32.07■■■□□ 2.73
PHF1-208ENST00000486845 UBAP1LF5GYI3 381 aa32.07■■■□□ 2.72
PHF1-208ENST00000486845 PZPP20742 1482 aa32.07■■■□□ 2.72
PHF1-208ENST00000486845 SOCS7O14512 581 aa32.05■■■□□ 2.72
PHF1-208ENST00000486845 ARHGEF5Q12774 1597 aa32.03■■■□□ 2.72
PHF1-208ENST00000486845 POLR1AO95602 1720 aaPredicted RBP32.03■■■□□ 2.72
PHF1-208ENST00000486845 FBXO31Q5XUX0 539 aaPredicted RBP32.02■■■□□ 2.72
PHF1-208ENST00000486845 WASHC2CQ9Y4E1 1318 aa32.01■■■□□ 2.72
PHF1-208ENST00000486845 NEURL4Q96JN8 1562 aa31.98■■■□□ 2.71
PHF1-208ENST00000486845 TSPY4P0CV99 314 aa31.97■■■□□ 2.71
PHF1-208ENST00000486845 TSPY10P0CW01 314 aa31.97■■■□□ 2.71
PHF1-208ENST00000486845 NLRP1Q9C000 1473 aa31.94■■■□□ 2.7
PHF1-208ENST00000486845 CPS1P31327 1500 aa31.94■■■□□ 2.7
PHF1-208ENST00000486845 MIA2Q96PC5 1412 aa31.92■■■□□ 2.7
PHF1-208ENST00000486845 ANKLE2Q86XL3 938 aa31.9■■■□□ 2.7
PHF1-208ENST00000486845 THEMISQ8N1K5 641 aaPredicted RBP31.9■■■□□ 2.7
PHF1-208ENST00000486845 LRRC9Q6ZRR7 1453 aa31.9■■■□□ 2.7
PHF1-208ENST00000486845 SHANK2Q9UPX8 1470 aa31.9■■■□□ 2.7
PHF1-208ENST00000486845 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.89■■■□□ 2.72e-15■■■□□ 18.3
PHF1-208ENST00000486845 UGGT1Q9NYU2 1555 aa31.89■■■□□ 2.7
PHF1-208ENST00000486845 RNF17Q9BXT8 1623 aaKnown RBP31.89■■■□□ 2.7
PHF1-208ENST00000486845 VPS8Q8N3P4 1428 aa31.88■■■□□ 2.69
PHF1-208ENST00000486845 MAST1Q9Y2H9 1570 aa31.88■■■□□ 2.69
PHF1-208ENST00000486845 ZC3H13Q5T200 1668 aaKnown RBP31.86■■■□□ 2.69
PHF1-208ENST00000486845 DEPDC5O75140 1603 aa31.85■■■□□ 2.69
PHF1-208ENST00000486845 ABCC3O15438 1527 aa31.83■■■□□ 2.69
PHF1-208ENST00000486845 MED14O60244 1454 aa31.83■■■□□ 2.69
PHF1-208ENST00000486845 EIF2AK4Q9P2K8 1649 aaKnown RBP31.82■■■□□ 2.69
PHF1-208ENST00000486845 TOM1O60784 492 aa31.82■■■□□ 2.68
PHF1-208ENST00000486845 NPHP4O75161 1426 aaPredicted RBP31.82■■■□□ 2.68
PHF1-208ENST00000486845 VWDEQ8N2E2 1590 aa31.81■■■□□ 2.68
PHF1-208ENST00000486845 SCAF1Q9H7N4 1312 aaKnown RBP31.8■■■□□ 2.68
PHF1-208ENST00000486845 MAP3K1Q13233 1512 aa31.78■■■□□ 2.68
PHF1-208ENST00000486845 PIP4K2BP78356 416 aa31.77■■■□□ 2.68
PHF1-208ENST00000486845 IQGAP1P46940 1657 aa31.76■■■□□ 2.67
PHF1-208ENST00000486845 MYOM3Q5VTT5 1437 aa31.75■■■□□ 2.67
PHF1-208ENST00000486845 ERVK-7P63135 1459 aa31.75■■■□□ 2.67
PHF1-208ENST00000486845 HSPA1LP34931 641 aa31.74■■■□□ 2.67
PHF1-208ENST00000486845 MROH1Q8NDA8 1641 aa31.73■■■□□ 2.67
PHF1-208ENST00000486845 KANK4Q5T7N3 995 aaPredicted RBP31.71■■■□□ 2.67
PHF1-208ENST00000486845 DUOX2Q9NRD8 1548 aa31.7■■■□□ 2.67
PHF1-208ENST00000486845 CEP152O94986 1710 aa31.69■■■□□ 2.66
PHF1-208ENST00000486845 LOC105371045A0A1W2PR82 267 aa31.67■■■□□ 2.66
PHF1-208ENST00000486845 MED1Q15648 1581 aaPredicted RBP31.66■■■□□ 2.66
PHF1-208ENST00000486845 UBR1Q8IWV7 1749 aa31.63■■■□□ 2.65
PHF1-208ENST00000486845 SYNMO15061 1565 aa31.62■■■□□ 2.65
PHF1-208ENST00000486845 ALKQ9UM73 1620 aa31.61■■■□□ 2.65
PHF1-208ENST00000486845 CFAP65Q6ZU64 1925 aaKnown RBP31.61■■■□□ 2.65
PHF1-208ENST00000486845 STRCP1A6NGW2 1772 aa31.61■■■□□ 2.65
PHF1-208ENST00000486845 PRDM15P57071 1507 aaPredicted RBP31.6■■■□□ 2.65
PHF1-208ENST00000486845 KIF15Q9NS87 1388 aa31.6■■■□□ 2.65
PHF1-208ENST00000486845 LRRC7Q96NW7 1537 aa31.59■■■□□ 2.65
PHF1-208ENST00000486845 CROCC2H7BZ55 1655 aa31.59■■■□□ 2.65
PHF1-208ENST00000486845 SCAF11Q99590 1463 aaKnown RBP31.59■■■□□ 2.65
PHF1-208ENST00000486845 ARHGAP31Q2M1Z3 1444 aa31.58■■■□□ 2.65
PHF1-208ENST00000486845 ERBINQ96RT1 1412 aa31.58■■■□□ 2.65
PHF1-208ENST00000486845 ABCC5O15440 1437 aa31.55■■■□□ 2.64
PHF1-208ENST00000486845 SLIT1O75093 1534 aa31.54■■■□□ 2.64
PHF1-208ENST00000486845 PTPN23Q9H3S7 1636 aa31.53■■■□□ 2.64
PHF1-208ENST00000486845 ARHGAP23Q9P227 1491 aa31.53■■■□□ 2.64
PHF1-208ENST00000486845 RRP7BPQ9NSQ0 103 aa31.51■■■□□ 2.63
PHF1-208ENST00000486845 TXNDC2Q86VQ3 553 aa31.49■■■□□ 2.63
PHF1-208ENST00000486845 LTKP29376 864 aa31.48■■■□□ 2.63
PHF1-208ENST00000486845 APLP2Q06481 763 aa31.48■■■□□ 2.63
PHF1-208ENST00000486845 DAPK1P53355 1430 aa31.48■■■□□ 2.63
PHF1-208ENST00000486845 KANK1Q14678 1352 aa31.47■■■□□ 2.63
PHF1-208ENST00000486845 EID1Q9Y6B2 187 aa31.47■■■□□ 2.63
PHF1-208ENST00000486845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.46■■■□□ 2.633e-6■■□□□ 11.7
PHF1-208ENST00000486845 PIK3C2BO00750 1634 aa31.45■■■□□ 2.62
PHF1-208ENST00000486845 PHF23Q9BUL5 403 aaPredicted RBP31.44■■■□□ 2.62
PHF1-208ENST00000486845 FGD6Q6ZV73 1430 aa31.42■■■□□ 2.62
PHF1-208ENST00000486845 ANKRD30AQ9BXX3 1397 aa31.4■■■□□ 2.62
PHF1-208ENST00000486845 TMEM2Q9UHN6 1383 aa31.4■■■□□ 2.62
PHF1-208ENST00000486845 LMTK2Q8IWU2 1503 aa31.39■■■□□ 2.62
PHF1-208ENST00000486845 KDM5AP29375 1690 aaKnown RBP31.39■■■□□ 2.62
PHF1-208ENST00000486845 SENP3Q9H4L4 574 aaPredicted RBP31.39■■■□□ 2.62
PHF1-208ENST00000486845 STAG3Q9UJ98 1225 aa31.39■■■□□ 2.62
PHF1-208ENST00000486845 EFCAB6Q5THR3 1501 aa31.37■■■□□ 2.61
PHF1-208ENST00000486845 XIRP1Q702N8 1843 aaKnown RBP31.35■■■□□ 2.61
PHF1-208ENST00000486845 CHIC2Q9UKJ5 165 aa31.33■■■□□ 2.61
PHF1-208ENST00000486845 IDI1Q13907 227 aa31.31■■■□□ 2.6
PHF1-208ENST00000486845 NOS1P29475 1434 aa31.27■■■□□ 2.6
PHF1-208ENST00000486845 ADGRB3O60242 1522 aa31.26■■■□□ 2.59
PHF1-208ENST00000486845 ADGRL2O95490 1459 aa31.25■■■□□ 2.59
PHF1-208ENST00000486845 KCNA6P17658 529 aa31.24■■■□□ 2.59
PHF1-208ENST00000486845 TMEM94Q12767 1356 aa31.24■■■□□ 2.59
PHF1-208ENST00000486845 TET3O43151 1660 aa31.24■■■□□ 2.59
PHF1-208ENST00000486845 FAM135BQ49AJ0 1406 aa31.24■■■□□ 2.59
PHF1-208ENST00000486845 SLC52A1Q9NWF4 448 aa31.21■■■□□ 2.59
PHF1-208ENST00000486845 SLC26A8Q96RN1 970 aa31.2■■■□□ 2.59
PHF1-208ENST00000486845 RPRD2Q5VT52 1461 aaKnown RBP31.18■■■□□ 2.58
PHF1-208ENST00000486845 NKTRP30414 1462 aaKnown RBP31.17■■■□□ 2.58
PHF1-208ENST00000486845 PROSER2Q86WR7 435 aaPredicted RBP31.17■■■□□ 2.58
PHF1-208ENST00000486845 NWD1Q149M9 1564 aa31.17■■■□□ 2.58
PHF1-208ENST00000486845 ANKRD50Q9ULJ7 1429 aa31.15■■■□□ 2.58
PHF1-208ENST00000486845 FAM50AQ14320 339 aaKnown RBP31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms