RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 MARVELD3Q96A59 401 aa10.54□□□□□ -0.72
NECTIN3-208ENST00000486596 PPRC1Q5VV67 1664 aaKnown RBP10.53□□□□□ -0.72
NECTIN3-208ENST00000486596 CARMIL1Q5VZK9 1371 aa10.53□□□□□ -0.72
NECTIN3-208ENST00000486596 ASXL2Q76L83 1435 aa10.53□□□□□ -0.72
NECTIN3-208ENST00000486596 NLRP6P59044 892 aa10.53□□□□□ -0.72
NECTIN3-208ENST00000486596 TNIKQ9UKE5 1360 aa10.52□□□□□ -0.72
NECTIN3-208ENST00000486596 IQGAP2Q13576 1575 aa10.52□□□□□ -0.72
NECTIN3-208ENST00000486596 TMEM92Q6UXU6 159 aa10.52□□□□□ -0.73
NECTIN3-208ENST00000486596 DISP1Q96F81 1524 aa10.51□□□□□ -0.73
NECTIN3-208ENST00000486596 GLI2P10070 1586 aa10.51□□□□□ -0.73
NECTIN3-208ENST00000486596 CARMIL2Q6F5E8 1435 aa10.5□□□□□ -0.73
NECTIN3-208ENST00000486596 UHRF1BP1LA0JNW5 1464 aa10.5□□□□□ -0.73
NECTIN3-208ENST00000486596 MFRPQ9BY79 579 aa10.5□□□□□ -0.73
NECTIN3-208ENST00000486596 PLB1Q6P1J6 1458 aa10.49□□□□□ -0.73
NECTIN3-208ENST00000486596 UACAQ9BZF9 1416 aa10.49□□□□□ -0.73
NECTIN3-208ENST00000486596 COL17A1Q9UMD9 1497 aaPredicted RBP10.49□□□□□ -0.73
NECTIN3-208ENST00000486596 EMP3P54852 163 aa10.48□□□□□ -0.73
NECTIN3-208ENST00000486596 DOK7Q18PE1 504 aa10.48□□□□□ -0.73
NECTIN3-208ENST00000486596 ADGRL1O94910 1474 aa10.48□□□□□ -0.73
NECTIN3-208ENST00000486596 EPRSP07814 1512 aaKnown RBP10.47□□□□□ -0.73
NECTIN3-208ENST00000486596 KDM5BQ9UGL1 1544 aa10.47□□□□□ -0.73
NECTIN3-208ENST00000486596 MAP3K4Q9Y6R4 1608 aa10.47□□□□□ -0.73
NECTIN3-208ENST00000486596 HOXB1P14653 301 aaPredicted RBP10.46□□□□□ -0.73
NECTIN3-208ENST00000486596 KIAA0556O60303 1618 aa10.45□□□□□ -0.74
NECTIN3-208ENST00000486596 ZCCHC11Q5TAX3 1644 aaKnown RBP10.45□□□□□ -0.74
NECTIN3-208ENST00000486596 UGGT2Q9NYU1 1516 aa10.45□□□□□ -0.74
NECTIN3-208ENST00000486596 POTEB3A0JP26 581 aa10.45□□□□□ -0.74
NECTIN3-208ENST00000486596 POTEBQ6S5H4 581 aa10.45□□□□□ -0.74
NECTIN3-208ENST00000486596 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
NECTIN3-208ENST00000486596 ZNF710Q8N1W2 664 aa10.43□□□□□ -0.74
NECTIN3-208ENST00000486596 RAPGEF2Q9Y4G8 1499 aa10.42□□□□□ -0.74
NECTIN3-208ENST00000486596 FAM205CA6NFA0 338 aa10.42□□□□□ -0.74
NECTIN3-208ENST00000486596 CHGAP10645 457 aaKnown RBP10.42□□□□□ -0.74
NECTIN3-208ENST00000486596 ZSWIM6Q9HCJ5 1215 aa10.42□□□□□ -0.74
NECTIN3-208ENST00000486596 TEX14Q8IWB6 1497 aa10.41□□□□□ -0.74
NECTIN3-208ENST00000486596 RIMBP2O15034 1052 aa10.4□□□□□ -0.74
NECTIN3-208ENST00000486596 WDR7Q9Y4E6 1490 aa10.4□□□□□ -0.74
NECTIN3-208ENST00000486596 HECW2Q9P2P5 1572 aa10.39□□□□□ -0.75
NECTIN3-208ENST00000486596 SPNS2Q8IVW8 549 aa10.38□□□□□ -0.75
NECTIN3-208ENST00000486596 KIF3CO14782 793 aa10.37□□□□□ -0.75
NECTIN3-208ENST00000486596 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
NECTIN3-208ENST00000486596 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
NECTIN3-208ENST00000486596 ABCA8O94911 1581 aa10.36□□□□□ -0.75
NECTIN3-208ENST00000486596 GPR153Q6NV75 609 aa10.36□□□□□ -0.75
NECTIN3-208ENST00000486596 CTTNBP2Q8WZ74 1663 aa10.36□□□□□ -0.75
NECTIN3-208ENST00000486596 MAGI3Q5TCQ9 1506 aa10.35□□□□□ -0.75
NECTIN3-208ENST00000486596 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
NECTIN3-208ENST00000486596 CFAP43Q8NDM7 1665 aa10.34□□□□□ -0.75
NECTIN3-208ENST00000486596 CD109Q6YHK3 1445 aa10.33□□□□□ -0.76
NECTIN3-208ENST00000486596 AMER1Q5JTC6 1135 aaPredicted RBP10.33□□□□□ -0.76
NECTIN3-208ENST00000486596 ERBB3P21860 1342 aa10.33□□□□□ -0.76
NECTIN3-208ENST00000486596 MMRN1Q13201 1228 aa10.32□□□□□ -0.76
NECTIN3-208ENST00000486596 GOLGA3Q08378 1498 aa10.31□□□□□ -0.76
NECTIN3-208ENST00000486596 C2orf72A6NCS6 295 aa10.31□□□□□ -0.76
NECTIN3-208ENST00000486596 KCNH8Q96L42 1107 aa10.31□□□□□ -0.76
NECTIN3-208ENST00000486596 KIF21BO75037 1637 aa10.31□□□□□ -0.76
NECTIN3-208ENST00000486596 PPP1R37O75864 691 aa10.3□□□□□ -0.76
NECTIN3-208ENST00000486596 RTN4Q9NQC3 1192 aaKnown RBP10.3□□□□□ -0.76
NECTIN3-208ENST00000486596 PRXQ9BXM0 1461 aa10.3□□□□□ -0.76
NECTIN3-208ENST00000486596 ARID3CA6NKF2 412 aa10.28□□□□□ -0.76
NECTIN3-208ENST00000486596 ARSIQ5FYB1 569 aa10.27□□□□□ -0.77
NECTIN3-208ENST00000486596 VARS2Q5ST30 1063 aaKnown RBP10.27□□□□□ -0.77
NECTIN3-208ENST00000486596 ATP10BO94823 1461 aa10.26□□□□□ -0.77
NECTIN3-208ENST00000486596 SLC34A2O95436 690 aa10.26□□□□□ -0.77
NECTIN3-208ENST00000486596 ARAP3Q8WWN8 1544 aa10.26□□□□□ -0.77
NECTIN3-208ENST00000486596 ZNF687Q8N1G0 1237 aa10.25□□□□□ -0.77
NECTIN3-208ENST00000486596 P3H3Q8IVL6 736 aa10.24□□□□□ -0.77
NECTIN3-208ENST00000486596 ABCA9Q8IUA7 1624 aa10.24□□□□□ -0.77
NECTIN3-208ENST00000486596 TMC2Q8TDI7 906 aa10.23□□□□□ -0.77
NECTIN3-208ENST00000486596 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
NECTIN3-208ENST00000486596 FRMPD1Q5SYB0 1578 aa10.22□□□□□ -0.77
NECTIN3-208ENST00000486596 ADAMTSL3P82987 1691 aa10.22□□□□□ -0.77
NECTIN3-208ENST00000486596 PTPRMP28827 1452 aa10.22□□□□□ -0.77
NECTIN3-208ENST00000486596 KHSRPQ92945 711 aaKnown RBP eCLIP10.21□□□□□ -0.77
NECTIN3-208ENST00000486596 ZNF316A6NFI3 1004 aaPredicted RBP10.2□□□□□ -0.78
NECTIN3-208ENST00000486596 RAPGEF3O95398 923 aa10.2□□□□□ -0.78
NECTIN3-208ENST00000486596 RAPGEF6Q8TEU7 1601 aa10.2□□□□□ -0.78
NECTIN3-208ENST00000486596 NEO1Q92859 1461 aa10.19□□□□□ -0.78
NECTIN3-208ENST00000486596 NKX1-1Q15270 411 aaPredicted RBP10.19□□□□□ -0.78
NECTIN3-208ENST00000486596 MADDQ8WXG6 1647 aa10.18□□□□□ -0.78
NECTIN3-208ENST00000486596 NUP153P49790 1475 aaKnown RBP10.18□□□□□ -0.78
NECTIN3-208ENST00000486596 BCORL1Q5H9F3 1711 aa10.18□□□□□ -0.78
NECTIN3-208ENST00000486596 PHLDB1Q86UU1 1377 aa10.17□□□□□ -0.78
NECTIN3-208ENST00000486596 PCDHGA4Q9Y5G9 962 aa10.17□□□□□ -0.78
NECTIN3-208ENST00000486596 FOXK1P85037 733 aa10.16□□□□□ -0.78
NECTIN3-208ENST00000486596 GPHNQ9NQX3 736 aaPredicted RBP10.16□□□□□ -0.78
NECTIN3-208ENST00000486596 ARHGEF40Q8TER5 1519 aa10.16□□□□□ -0.78
NECTIN3-208ENST00000486596 LMTK3Q96Q04 1460 aa10.16□□□□□ -0.78
NECTIN3-208ENST00000486596 FHOD3Q2V2M9 1422 aa10.16□□□□□ -0.78
NECTIN3-208ENST00000486596 PCF11O94913 1555 aaKnown RBP10.15□□□□□ -0.78
NECTIN3-208ENST00000486596 FBXO41Q8TF61 875 aa10.15□□□□□ -0.78
NECTIN3-208ENST00000486596 RYDENQ9NUL5 291 aaKnown RBP10.15□□□□□ -0.78
NECTIN3-208ENST00000486596 NUDT7P0C024 238 aa10.14□□□□□ -0.79
NECTIN3-208ENST00000486596 RICTORQ6R327 1708 aa10.13□□□□□ -0.79
NECTIN3-208ENST00000486596 FAM9AQ8IZU1 332 aaPredicted RBP10.13□□□□□ -0.79
NECTIN3-208ENST00000486596 PTCD2Q8WV60 388 aaKnown RBP10.13□□□□□ -0.79
NECTIN3-208ENST00000486596 SIGLEC1Q9BZZ2 1709 aa10.13□□□□□ -0.79
NECTIN3-208ENST00000486596 RIMS1Q86UR5 1692 aaKnown RBP10.12□□□□□ -0.79
NECTIN3-208ENST00000486596 ARID4BQ4LE39 1312 aaPredicted RBP10.12□□□□□ -0.79
NECTIN3-208ENST00000486596 RANGAP1P46060 587 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms