RNA–Protein interactions for RNA: ENST00000486593.5

LAMP2-204, Transcript of lysosomal associated membrane protein 2, humanhuman

TSL 5

Gene LAMP2, Length 1,069 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-204ENST00000486593 HS6ST3Q8IZP7 471 aa13.19□□□□□ -0.3
LAMP2-204ENST00000486593 FAM163AQ96GL9 167 aaPredicted RBP13.19□□□□□ -0.3
LAMP2-204ENST00000486593 NLRP6P59044 892 aa13.18□□□□□ -0.3
LAMP2-204ENST00000486593 C3orf67Q6ZVT6 689 aa13.18□□□□□ -0.3
LAMP2-204ENST00000486593 MICALL2Q8IY33 904 aa13.18□□□□□ -0.3
LAMP2-204ENST00000486593 CCDC18Q5T9S5 1454 aa13.17□□□□□ -0.3
LAMP2-204ENST00000486593 CHGAP10645 457 aaKnown RBP13.17□□□□□ -0.3
LAMP2-204ENST00000486593 CFAP43Q8NDM7 1665 aa13.17□□□□□ -0.3
LAMP2-204ENST00000486593 RAPGEF6Q8TEU7 1601 aa13.15□□□□□ -0.3
LAMP2-204ENST00000486593 TMEM92Q6UXU6 159 aa13.15□□□□□ -0.3
LAMP2-204ENST00000486593 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
LAMP2-204ENST00000486593 TIAM1Q13009 1591 aa13.14□□□□□ -0.31
LAMP2-204ENST00000486593 PPP1R37O75864 691 aa13.12□□□□□ -0.31
LAMP2-204ENST00000486593 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
LAMP2-204ENST00000486593 PTPRGP23470 1445 aa13.12□□□□□ -0.31
LAMP2-204ENST00000486593 ABCA8O94911 1581 aa13.11□□□□□ -0.31
LAMP2-204ENST00000486593 G3V3G9 751 aa13.08□□□□□ -0.32
LAMP2-204ENST00000486593 RTN4Q9NQC3 1192 aaKnown RBP13.08□□□□□ -0.32
LAMP2-204ENST00000486593 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.32
LAMP2-204ENST00000486593 POTEMA6NI47 508 aa13.07□□□□□ -0.32
LAMP2-204ENST00000486593 ST18O60284 1047 aa13.07□□□□□ -0.32
LAMP2-204ENST00000486593 DNAJC5Q9H3Z4 198 aa13.07□□□□□ -0.32
LAMP2-204ENST00000486593 EHBP1L1Q8N3D4 1523 aa13.07□□□□□ -0.32
LAMP2-204ENST00000486593 UACAQ9BZF9 1416 aa13.06□□□□□ -0.32
LAMP2-204ENST00000486593 UHRF1BP1LA0JNW5 1464 aa13.06□□□□□ -0.32
LAMP2-204ENST00000486593 NUP153P49790 1475 aaKnown RBP13.06□□□□□ -0.32
LAMP2-204ENST00000486593 LRRC9Q6ZRR7 1453 aa13.06□□□□□ -0.32
LAMP2-204ENST00000486593 POTEGQ6S5H5 508 aa13.06□□□□□ -0.32
LAMP2-204ENST00000486593 LRRIQ1Q96JM4 1722 aa13.05□□□□□ -0.32
LAMP2-204ENST00000486593 PLB1Q6P1J6 1458 aa13.05□□□□□ -0.32
LAMP2-204ENST00000486593 ABCC2Q92887 1545 aa13.05□□□□□ -0.32
LAMP2-204ENST00000486593 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
LAMP2-204ENST00000486593 ERCC6L2Q5T890 1561 aa13.05□□□□□ -0.32
LAMP2-204ENST00000486593 ATP1B4Q9UN42 357 aaPredicted RBP13.04□□□□□ -0.32
LAMP2-204ENST00000486593 HOXB3P14651 431 aaPredicted RBP13.02□□□□□ -0.33
LAMP2-204ENST00000486593 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.33
LAMP2-204ENST00000486593 TRIM26Q12899 539 aaPredicted RBP13.01□□□□□ -0.33
LAMP2-204ENST00000486593 SUPT6HQ7KZ85 1726 aaKnown RBP13.01□□□□□ -0.33
LAMP2-204ENST00000486593 ARHGEF11O15085 1522 aa12.99□□□□□ -0.33
LAMP2-204ENST00000486593 CDK13Q14004 1512 aaKnown RBP12.98□□□□□ -0.33
LAMP2-204ENST00000486593 TTBK1Q5TCY1 1321 aaPredicted RBP12.97□□□□□ -0.33
LAMP2-204ENST00000486593 ADCY10Q96PN6 1610 aa12.97□□□□□ -0.33
LAMP2-204ENST00000486593 KDM5BQ9UGL1 1544 aa12.97□□□□□ -0.33
LAMP2-204ENST00000486593 TROQ12816 1431 aaPredicted RBP12.96□□□□□ -0.33
LAMP2-204ENST00000486593 AMER1Q5JTC6 1135 aaPredicted RBP12.96□□□□□ -0.33
LAMP2-204ENST00000486593 KANK4Q5T7N3 995 aaPredicted RBP12.96□□□□□ -0.33
LAMP2-204ENST00000486593 ATP10BO94823 1461 aa12.96□□□□□ -0.34
LAMP2-204ENST00000486593 KIF3CO14782 793 aa12.95□□□□□ -0.34
LAMP2-204ENST00000486593 SNPHO15079 494 aa12.95□□□□□ -0.34
LAMP2-204ENST00000486593 RIMBP3CA6NJZ7 1639 aa12.94□□□□□ -0.34
LAMP2-204ENST00000486593 RIMBP3BA6NNM3 1639 aa12.94□□□□□ -0.34
LAMP2-204ENST00000486593 KIF14Q15058 1648 aa12.94□□□□□ -0.34
LAMP2-204ENST00000486593 ZCCHC11Q5TAX3 1644 aaKnown RBP12.94□□□□□ -0.34
LAMP2-204ENST00000486593 RIMBP3Q9UFD9 1639 aa12.94□□□□□ -0.34
LAMP2-204ENST00000486593 MAGI3Q5TCQ9 1506 aa12.93□□□□□ -0.34
LAMP2-204ENST00000486593 PLEKHD1A6NEE1 506 aa12.93□□□□□ -0.34
LAMP2-204ENST00000486593 NCOA2Q15596 1464 aa12.92□□□□□ -0.34
LAMP2-204ENST00000486593 GTPBP6O43824 516 aaPredicted RBP12.92□□□□□ -0.34
LAMP2-204ENST00000486593 MARVELD3Q96A59 401 aa12.92□□□□□ -0.34
LAMP2-204ENST00000486593 RRBP1Q9P2E9 1410 aaKnown RBP12.92□□□□□ -0.34
LAMP2-204ENST00000486593 ITSN2Q9NZM3 1697 aa12.92□□□□□ -0.34
LAMP2-204ENST00000486593 C2orf72A6NCS6 295 aa12.91□□□□□ -0.34
LAMP2-204ENST00000486593 PPARGC1BQ86YN6 1023 aaKnown RBP12.9□□□□□ -0.34
LAMP2-204ENST00000486593 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.9□□□□□ -0.34
LAMP2-204ENST00000486593 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
LAMP2-204ENST00000486593 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
LAMP2-204ENST00000486593 CCNB3Q8WWL7 1395 aa12.87□□□□□ -0.35
LAMP2-204ENST00000486593 PHLDB1Q86UU1 1377 aa12.86□□□□□ -0.35
LAMP2-204ENST00000486593 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
LAMP2-204ENST00000486593 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
LAMP2-204ENST00000486593 FGD6Q6ZV73 1430 aa12.86□□□□□ -0.35
LAMP2-204ENST00000486593 WDR7Q9Y4E6 1490 aa12.85□□□□□ -0.35
LAMP2-204ENST00000486593 ARID3CA6NKF2 412 aa12.84□□□□□ -0.35
LAMP2-204ENST00000486593 MAPKBP1O60336 1514 aa12.83□□□□□ -0.35
LAMP2-204ENST00000486593 PCGF6Q9BYE7 350 aa12.83□□□□□ -0.36
LAMP2-204ENST00000486593 ABCC10Q5T3U5 1492 aa12.83□□□□□ -0.36
LAMP2-204ENST00000486593 TCOF1Q13428 1488 aaKnown RBP12.82□□□□□ -0.36
LAMP2-204ENST00000486593 ARAP3Q8WWN8 1544 aa12.82□□□□□ -0.36
LAMP2-204ENST00000486593 PTPN23Q9H3S7 1636 aa12.81□□□□□ -0.36
LAMP2-204ENST00000486593 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
LAMP2-204ENST00000486593 MYO5CQ9NQX4 1742 aa12.81□□□□□ -0.36
LAMP2-204ENST00000486593 PREX2Q70Z35 1606 aa12.8□□□□□ -0.36
LAMP2-204ENST00000486593 CDC42BPAQ5VT25 1732 aa12.8□□□□□ -0.36
LAMP2-204ENST00000486593 ASXL2Q76L83 1435 aa12.79□□□□□ -0.36
LAMP2-204ENST00000486593 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.79□□□□□ -0.36
LAMP2-204ENST00000486593 GPATCH8Q9UKJ3 1502 aaKnown RBP12.79□□□□□ -0.36
LAMP2-204ENST00000486593 HOXB1P14653 301 aaPredicted RBP12.79□□□□□ -0.36
LAMP2-204ENST00000486593 GPR153Q6NV75 609 aa12.79□□□□□ -0.36
LAMP2-204ENST00000486593 ABCA9Q8IUA7 1624 aa12.79□□□□□ -0.36
LAMP2-204ENST00000486593 ZNF710Q8N1W2 664 aa12.78□□□□□ -0.36
LAMP2-204ENST00000486593 EMP3P54852 163 aa12.77□□□□□ -0.37
LAMP2-204ENST00000486593 CYB5RLQ6IPT4 315 aa12.77□□□□□ -0.37
LAMP2-204ENST00000486593 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
LAMP2-204ENST00000486593 TMC2Q8TDI7 906 aa12.77□□□□□ -0.37
LAMP2-204ENST00000486593 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.371e-7■□□□□ 9
LAMP2-204ENST00000486593 PLEKHH2Q8IVE3 1493 aa12.77□□□□□ -0.37
LAMP2-204ENST00000486593 TTC37Q6PGP7 1564 aa12.77□□□□□ -0.37
LAMP2-204ENST00000486593 RYDENQ9NUL5 291 aaKnown RBP12.75□□□□□ -0.37
LAMP2-204ENST00000486593 CFDP1Q9UEE9 299 aaPredicted RBP12.75□□□□□ -0.37
LAMP2-204ENST00000486593 CDC42BPBQ9Y5S2 1711 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms