RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 NYAP1Q6ZVC0 841 aa9.48□□□□□ -0.89
COMMD6-211ENST00000486516 LAPTM4BQ86VI4 370 aa9.46□□□□□ -0.9
COMMD6-211ENST00000486516 HS6ST3Q8IZP7 471 aa9.46□□□□□ -0.9
COMMD6-211ENST00000486516 NKX1-1Q15270 411 aaPredicted RBP9.44□□□□□ -0.9
COMMD6-211ENST00000486516 PRKD2Q9BZL6 878 aa9.44□□□□□ -0.9
COMMD6-211ENST00000486516 HPS5Q9UPZ3 1129 aa9.44□□□□□ -0.9
COMMD6-211ENST00000486516 NRG2O14511 850 aaPredicted RBP9.43□□□□□ -0.9
COMMD6-211ENST00000486516 ZNF787Q6DD87 383 aa9.43□□□□□ -0.9
COMMD6-211ENST00000486516 MAP3K9P80192 1104 aa9.42□□□□□ -0.9
COMMD6-211ENST00000486516 ZNF775Q96BV0 537 aaPredicted RBP9.41□□□□□ -0.9
COMMD6-211ENST00000486516 TSR3Q9UJK0 312 aaKnown RBP9.41□□□□□ -0.9
COMMD6-211ENST00000486516 EMILIN3Q9NT22 766 aa9.4□□□□□ -0.9
COMMD6-211ENST00000486516 PDE4AP27815 886 aa9.39□□□□□ -0.91
COMMD6-211ENST00000486516 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.39□□□□□ -0.91
COMMD6-211ENST00000486516 TYW1BQ6NUM6 668 aa9.38□□□□□ -0.91
COMMD6-211ENST00000486516 CHGAP10645 457 aaKnown RBP9.37□□□□□ -0.91
COMMD6-211ENST00000486516 LRCH3Q96II8 777 aa9.37□□□□□ -0.91
COMMD6-211ENST00000486516 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
COMMD6-211ENST00000486516 FAM98CQ17RN3 349 aaKnown RBP9.36□□□□□ -0.91
COMMD6-211ENST00000486516 TJAP1Q5JTD0 557 aa9.36□□□□□ -0.91
COMMD6-211ENST00000486516 TRIM6-TRIM34B2RNG4 842 aa9.35□□□□□ -0.91
COMMD6-211ENST00000486516 FBXW7Q969H0 707 aa9.35□□□□□ -0.91
COMMD6-211ENST00000486516 ONECUT3O60422 494 aaPredicted RBP9.34□□□□□ -0.91
COMMD6-211ENST00000486516 PHF14O94880 888 aa9.34□□□□□ -0.91
COMMD6-211ENST00000486516 C6orf132Q5T0Z8 1188 aa9.34□□□□□ -0.91
COMMD6-211ENST00000486516 PPP1R18Q6NYC8 613 aa9.34□□□□□ -0.91
COMMD6-211ENST00000486516 DDX27Q96GQ7 796 aaKnown RBP9.34□□□□□ -0.91
COMMD6-211ENST00000486516 PDZRN3Q9UPQ7 1066 aa9.32□□□□□ -0.92
COMMD6-211ENST00000486516 V9GY48 417 aaPredicted RBP9.31□□□□□ -0.92
COMMD6-211ENST00000486516 RBM33Q96EV2 1170 aaKnown RBP9.3□□□□□ -0.92
COMMD6-211ENST00000486516 PPP4CP60510 307 aa9.29□□□□□ -0.92
COMMD6-211ENST00000486516 MFSD10Q14728 455 aa9.29□□□□□ -0.92
COMMD6-211ENST00000486516 ZNF516Q92618 1163 aa9.29□□□□□ -0.92
COMMD6-211ENST00000486516 MTRQ99707 1265 aa9.29□□□□□ -0.92
COMMD6-211ENST00000486516 TSKSQ9UJT2 592 aa9.27□□□□□ -0.93
COMMD6-211ENST00000486516 DNAJC5Q9H3Z4 198 aa9.26□□□□□ -0.93
COMMD6-211ENST00000486516 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.26□□□□□ -0.93
COMMD6-211ENST00000486516 SMAPO00193 183 aa9.25□□□□□ -0.93
COMMD6-211ENST00000486516 IL21Q9HBE4 155 aa9.25□□□□□ -0.93
COMMD6-211ENST00000486516 POTECB2RU33 542 aa9.24□□□□□ -0.93
COMMD6-211ENST00000486516 SAMD7Q7Z3H4 446 aa9.24□□□□□ -0.93
COMMD6-211ENST00000486516 NKX2-3Q8TAU0 364 aa9.24□□□□□ -0.93
COMMD6-211ENST00000486516 EPAS1Q99814 870 aa9.23□□□□□ -0.93
COMMD6-211ENST00000486516 RYDENQ9NUL5 291 aaKnown RBP9.23□□□□□ -0.93
COMMD6-211ENST00000486516 C3orf80F5H4A9 247 aa9.21□□□□□ -0.94
COMMD6-211ENST00000486516 TSR1Q2NL82 804 aaKnown RBP9.2□□□□□ -0.94
COMMD6-211ENST00000486516 DDX12PQ92771 950 aa9.2□□□□□ -0.94
COMMD6-211ENST00000486516 DPYSL4O14531 572 aa9.19□□□□□ -0.94
COMMD6-211ENST00000486516 TRIM67Q6ZTA4 783 aa9.19□□□□□ -0.94
COMMD6-211ENST00000486516 PACS2Q86VP3 889 aa9.19□□□□□ -0.94
COMMD6-211ENST00000486516 FAM198AQ9UFP1 575 aa9.19□□□□□ -0.94
COMMD6-211ENST00000486516 GTPBP6O43824 516 aaPredicted RBP9.18□□□□□ -0.94
COMMD6-211ENST00000486516 APLP1P51693 650 aa9.17□□□□□ -0.94
COMMD6-211ENST00000486516 CADPS2Q86UW7 1296 aa9.17□□□□□ -0.94
COMMD6-211ENST00000486516 MYT1Q01538 1121 aa9.15□□□□□ -0.94
COMMD6-211ENST00000486516 RNF40O75150 1001 aa9.13□□□□□ -0.95
COMMD6-211ENST00000486516 COPS2P61201 443 aa9.13□□□□□ -0.95
COMMD6-211ENST00000486516 EN1Q05925 392 aaPredicted RBP9.13□□□□□ -0.95
COMMD6-211ENST00000486516 EMID1Q96A84 441 aaPredicted RBP9.13□□□□□ -0.95
COMMD6-211ENST00000486516 MAP3K7O43318 606 aa9.12□□□□□ -0.95
COMMD6-211ENST00000486516 NBR1Q14596 966 aa9.12□□□□□ -0.95
COMMD6-211ENST00000486516 CDCA7LQ96GN5 454 aa9.12□□□□□ -0.95
COMMD6-211ENST00000486516 PKDCCQ504Y2 493 aa9.11□□□□□ -0.95
COMMD6-211ENST00000486516 LCE2AQ5TA79 106 aaPredicted RBP9.11□□□□□ -0.95
COMMD6-211ENST00000486516 CAMK2BQ13554 666 aa9.1□□□□□ -0.95
COMMD6-211ENST00000486516 TATDN2Q93075 761 aa9.09□□□□□ -0.95
COMMD6-211ENST00000486516 PNMA3Q9UL41 463 aa9.09□□□□□ -0.95
COMMD6-211ENST00000486516 GGCXP38435 758 aa9.08□□□□□ -0.96
COMMD6-211ENST00000486516 PRSS12P56730 875 aa9.08□□□□□ -0.96
COMMD6-211ENST00000486516 TREML4Q6UXN2 200 aa9.08□□□□□ -0.96
COMMD6-211ENST00000486516 SLC19A1P41440 591 aa9.07□□□□□ -0.96
COMMD6-211ENST00000486516 PRIM1P49642 420 aaKnown RBP9.07□□□□□ -0.96
COMMD6-211ENST00000486516 DGAT1O75907 488 aa9.06□□□□□ -0.96
COMMD6-211ENST00000486516 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
COMMD6-211ENST00000486516 NBPF26B4DH59 902 aa9.04□□□□□ -0.96
COMMD6-211ENST00000486516 RNF223E7ERA6 249 aa9.04□□□□□ -0.96
COMMD6-211ENST00000486516 ST8SIA5O15466 376 aa9.04□□□□□ -0.96
COMMD6-211ENST00000486516 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
COMMD6-211ENST00000486516 NUDT18Q6ZVK8 323 aa9.03□□□□□ -0.96
COMMD6-211ENST00000486516 ZPR1O75312 459 aa9.02□□□□□ -0.97
COMMD6-211ENST00000486516 SPRYD7Q5W111 196 aa9.02□□□□□ -0.97
COMMD6-211ENST00000486516 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
COMMD6-211ENST00000486516 PPEF1O14829 653 aaPredicted RBP9□□□□□ -0.97
COMMD6-211ENST00000486516 SWT1Q5T5J6 900 aaKnown RBP9□□□□□ -0.97
COMMD6-211ENST00000486516 PRR20EP86478 221 aa8.99□□□□□ -0.97
COMMD6-211ENST00000486516 PRR20CP86479 221 aa8.99□□□□□ -0.97
COMMD6-211ENST00000486516 PRR20DP86480 221 aa8.99□□□□□ -0.97
COMMD6-211ENST00000486516 PRR20BP86481 221 aa8.99□□□□□ -0.97
COMMD6-211ENST00000486516 PRR20AP86496 221 aa8.99□□□□□ -0.97
COMMD6-211ENST00000486516 LIAT1Q6ZQX7 453 aa8.99□□□□□ -0.97
COMMD6-211ENST00000486516 ZNF598Q86UK7 904 aaKnown RBP8.99□□□□□ -0.97
COMMD6-211ENST00000486516 CDHR5Q9HBB8 845 aa8.99□□□□□ -0.97
COMMD6-211ENST00000486516 TLL1O43897 1013 aa8.98□□□□□ -0.97
COMMD6-211ENST00000486516 HDGFP51858 240 aaKnown RBP8.98□□□□□ -0.97
COMMD6-211ENST00000486516 AAASQ9NRG9 546 aa8.98□□□□□ -0.97
COMMD6-211ENST00000486516 GDF9O60383 454 aa8.97□□□□□ -0.97
COMMD6-211ENST00000486516 PDIA6Q15084 440 aa8.97□□□□□ -0.97
COMMD6-211ENST00000486516 ZNF697Q5TEC3 545 aa8.97□□□□□ -0.97
COMMD6-211ENST00000486516 BLOC1S3Q6QNY0 202 aa8.96□□□□□ -0.98
COMMD6-211ENST00000486516 CERKQ8TCT0 537 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 208.7 ms