RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	PLCG2	P16885	1265 aa		11.59	□□□□□ -0.55
PUDP-204	ENST00000486446	STK24	Q9Y6E0	443 aa		11.59	□□□□□ -0.55
PUDP-204	ENST00000486446	SAMD9	Q5K651	1589 aa		11.58	□□□□□ -0.55
PUDP-204	ENST00000486446	PDCD7	Q8N8D1	485 aa	Known RBP	11.58	□□□□□ -0.56
PUDP-204	ENST00000486446	HS6ST3	Q8IZP7	471 aa		11.57	□□□□□ -0.56
PUDP-204	ENST00000486446	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.57	□□□□□ -0.56
PUDP-204	ENST00000486446	GLI2	P10070	1586 aa		11.57	□□□□□ -0.56
PUDP-204	ENST00000486446	SOX12	O15370	315 aa		11.56	□□□□□ -0.56
PUDP-204	ENST00000486446	ILDR2	Q71H61	639 aa		11.56	□□□□□ -0.56
PUDP-204	ENST00000486446	EPRS	P07814	1512 aa	Known RBP	11.55	□□□□□ -0.56
PUDP-204	ENST00000486446	ARID3C	A6NKF2	412 aa		11.55	□□□□□ -0.56
PUDP-204	ENST00000486446	UBTF	P17480	764 aa	Known RBP	11.55	□□□□□ -0.56
PUDP-204	ENST00000486446	WDR7	Q9Y4E6	1490 aa		11.55	□□□□□ -0.56
PUDP-204	ENST00000486446	RAPGEF6	Q8TEU7	1601 aa		11.53	□□□□□ -0.56
PUDP-204	ENST00000486446	MAP3K4	Q9Y6R4	1608 aa		11.53	□□□□□ -0.56
PUDP-204	ENST00000486446	FHOD3	Q2V2M9	1422 aa		11.52	□□□□□ -0.56
PUDP-204	ENST00000486446	EFCAB5	A4FU69	1503 aa		11.52	□□□□□ -0.57
PUDP-204	ENST00000486446	CHGA	P10645	457 aa	Known RBP	11.52	□□□□□ -0.57
PUDP-204	ENST00000486446	PPRC1	Q5VV67	1664 aa	Known RBP	11.52	□□□□□ -0.57
PUDP-204	ENST00000486446	KCNH8	Q96L42	1107 aa		11.51	□□□□□ -0.57
PUDP-204	ENST00000486446	OTUD5	Q96G74	571 aa		11.5	□□□□□ -0.57
PUDP-204	ENST00000486446	ATP10B	O94823	1461 aa		11.5	□□□□□ -0.57
PUDP-204	ENST00000486446	PHF8	Q9UPP1	1060 aa		11.49	□□□□□ -0.57
PUDP-204	ENST00000486446	DISP3	Q9P2K9	1392 aa		11.49	□□□□□ -0.57
PUDP-204	ENST00000486446	TEX14	Q8IWB6	1497 aa		11.49	□□□□□ -0.57
PUDP-204	ENST00000486446	DPY19L2	Q6NUT2	758 aa		11.48	□□□□□ -0.57
PUDP-204	ENST00000486446	FBXO22	Q8NEZ5	403 aa		11.48	□□□□□ -0.57
PUDP-204	ENST00000486446	MFRP	Q9BY79	579 aa		11.48	□□□□□ -0.57
PUDP-204	ENST00000486446	CFAP43	Q8NDM7	1665 aa		11.47	□□□□□ -0.57
PUDP-204	ENST00000486446	MAMSTR	Q6ZN01	415 aa		11.47	□□□□□ -0.57
PUDP-204	ENST00000486446	MS4A4A	Q96JQ5	239 aa		11.47	□□□□□ -0.57
PUDP-204	ENST00000486446	NUP153	P49790	1475 aa	Known RBP	11.46	□□□□□ -0.57
PUDP-204	ENST00000486446	CD109	Q6YHK3	1445 aa		11.46	□□□□□ -0.57
PUDP-204	ENST00000486446	NLRP6	P59044	892 aa		11.46	□□□□□ -0.57
PUDP-204	ENST00000486446	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.45	□□□□□ -0.58
PUDP-204	ENST00000486446	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.43	□□□□□ -0.58
PUDP-204	ENST00000486446	MAGI3	Q5TCQ9	1506 aa		11.43	□□□□□ -0.58
PUDP-204	ENST00000486446	ARHGAP35	Q9NRY4	1499 aa		11.43	□□□□□ -0.58
PUDP-204	ENST00000486446	SCUBE2	Q9NQ36	999 aa		11.42	□□□□□ -0.58
PUDP-204	ENST00000486446	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.41	□□□□□ -0.58
PUDP-204	ENST00000486446	PLEKHD1	A6NEE1	506 aa		11.41	□□□□□ -0.58
PUDP-204	ENST00000486446	NKX1-1	Q15270	411 aa	Predicted RBP	11.41	□□□□□ -0.58
PUDP-204	ENST00000486446	ABCA9	Q8IUA7	1624 aa		11.41	□□□□□ -0.58
PUDP-204	ENST00000486446	FMN1	Q68DA7	1419 aa		11.41	□□□□□ -0.58
PUDP-204	ENST00000486446	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.4	□□□□□ -0.58
PUDP-204	ENST00000486446	BOLA1	Q9Y3E2	137 aa		11.4	□□□□□ -0.58
PUDP-204	ENST00000486446	HECW1	Q76N89	1606 aa		11.39	□□□□□ -0.59
PUDP-204	ENST00000486446	SLC24A1	O60721	1099 aa		11.39	□□□□□ -0.59
PUDP-204	ENST00000486446	CDK13	Q14004	1512 aa	Known RBP	11.39	□□□□□ -0.59
PUDP-204	ENST00000486446	NEO1	Q92859	1461 aa		11.33	□□□□□ -0.6
PUDP-204	ENST00000486446	PHLDB1	Q86UU1	1377 aa		11.33	□□□□□ -0.6
PUDP-204	ENST00000486446	MICALL2	Q8IY33	904 aa		11.33	□□□□□ -0.6
PUDP-204	ENST00000486446	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.33	□□□□□ -0.6
PUDP-204	ENST00000486446	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.33	□□□□□ -0.6
PUDP-204	ENST00000486446	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
PUDP-204	ENST00000486446	ARAP3	Q8WWN8	1544 aa		11.33	□□□□□ -0.6
PUDP-204	ENST00000486446	CLIP1	P30622	1438 aa		11.33	□□□□□ -0.6
PUDP-204	ENST00000486446	PCF11	O94913	1555 aa	Known RBP	11.32	□□□□□ -0.6
PUDP-204	ENST00000486446	TTC37	Q6PGP7	1564 aa		11.32	□□□□□ -0.6
PUDP-204	ENST00000486446	LOC105371045	A0A1W2PR82	267 aa		11.31	□□□□□ -0.6
PUDP-204	ENST00000486446		G3V3G9	751 aa		11.31	□□□□□ -0.6
PUDP-204	ENST00000486446	PPP1R37	O75864	691 aa		11.31	□□□□□ -0.6
PUDP-204	ENST00000486446	CERK	Q8TCT0	537 aa		11.31	□□□□□ -0.6
PUDP-204	ENST00000486446	CFAP74	Q9C0B2	1584 aa		11.31	□□□□□ -0.6
PUDP-204	ENST00000486446	LRRIQ1	Q96JM4	1722 aa		11.31	□□□□□ -0.6
PUDP-204	ENST00000486446	CASKIN1	Q8WXD9	1431 aa		11.3	□□□□□ -0.6
PUDP-204	ENST00000486446	C3orf67	Q6ZVT6	689 aa		11.3	□□□□□ -0.6
PUDP-204	ENST00000486446	KIF14	Q15058	1648 aa		11.29	□□□□□ -0.6
PUDP-204	ENST00000486446	GTPBP6	O43824	516 aa	Predicted RBP	11.29	□□□□□ -0.6
PUDP-204	ENST00000486446	SLAIN1	Q8ND83	568 aa		11.29	□□□□□ -0.6
PUDP-204	ENST00000486446	BBX	Q8WY36	941 aa	Predicted RBP	11.29	□□□□□ -0.6
PUDP-204	ENST00000486446	RYDEN	Q9NUL5	291 aa	Known RBP	11.29	□□□□□ -0.6
PUDP-204	ENST00000486446	FANCA	O15360	1455 aa		11.29	□□□□□ -0.6
PUDP-204	ENST00000486446	TRO	Q12816	1431 aa	Predicted RBP	11.28	□□□□□ -0.6
PUDP-204	ENST00000486446	CCDC18	Q5T9S5	1454 aa		11.28	□□□□□ -0.6
PUDP-204	ENST00000486446	RAPGEF3	O95398	923 aa		11.28	□□□□□ -0.6
PUDP-204	ENST00000486446	AKNA	Q7Z591	1439 aa		11.27	□□□□□ -0.6
PUDP-204	ENST00000486446	MYO5C	Q9NQX4	1742 aa		11.27	□□□□□ -0.61
PUDP-204	ENST00000486446	DENND4B	O75064	1496 aa	Predicted RBP	11.26	□□□□□ -0.61
PUDP-204	ENST00000486446	FYCO1	Q9BQS8	1478 aa		11.26	□□□□□ -0.61
PUDP-204	ENST00000486446	FRMPD1	Q5SYB0	1578 aa		11.26	□□□□□ -0.61
PUDP-204	ENST00000486446	PLCH2	O75038	1416 aa		11.26	□□□□□ -0.61
PUDP-204	ENST00000486446	CEP162	Q5TB80	1403 aa		11.24	□□□□□ -0.61
PUDP-204	ENST00000486446	RICTOR	Q6R327	1708 aa		11.23	□□□□□ -0.61
PUDP-204	ENST00000486446	HRC	P23327	699 aa		11.23	□□□□□ -0.61
PUDP-204	ENST00000486446	EFCAB2	Q5VUJ9	269 aa		11.23	□□□□□ -0.61
PUDP-204	ENST00000486446	ARHGAP5	Q13017	1502 aa		11.23	□□□□□ -0.61
PUDP-204	ENST00000486446	TMEM92	Q6UXU6	159 aa		11.22	□□□□□ -0.61
PUDP-204	ENST00000486446	SCAPER	Q9BY12	1400 aa		11.22	□□□□□ -0.61
PUDP-204	ENST00000486446	HSPA2	P54652	639 aa		11.21	□□□□□ -0.61
PUDP-204	ENST00000486446	PTPRM	P28827	1452 aa		11.2	□□□□□ -0.62
PUDP-204	ENST00000486446	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.2	□□□□□ -0.62
PUDP-204	ENST00000486446	ZMYM4	Q5VZL5	1548 aa		11.19	□□□□□ -0.62
PUDP-204	ENST00000486446	ARHGEF40	Q8TER5	1519 aa		11.19	□□□□□ -0.62
PUDP-204	ENST00000486446	PREX2	Q70Z35	1606 aa		11.19	□□□□□ -0.62
PUDP-204	ENST00000486446	ZFYVE16	Q7Z3T8	1539 aa		11.19	□□□□□ -0.62
PUDP-204	ENST00000486446	POGZ	Q7Z3K3	1410 aa		11.18	□□□□□ -0.62
PUDP-204	ENST00000486446	CDC42BPB	Q9Y5S2	1711 aa		11.18	□□□□□ -0.62
PUDP-204	ENST00000486446	SPATA31D1	Q6ZQQ2	1576 aa		11.18	□□□□□ -0.62
PUDP-204	ENST00000486446	MAGI2	Q86UL8	1455 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms