RNA–Protein interactions for RNA: ENST00000486425.1

MUC4-222, Transcript of mucin 4, cell surface associated, human

TSL 4

Gene MUC4, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC4-222	ENST00000486425	RANGAP1	P46060	587 aa	Predicted RBP	11.43	□□□□□ -0.58
MUC4-222	ENST00000486425	EPRS	P07814	1512 aa	Known RBP	11.43	□□□□□ -0.58
MUC4-222	ENST00000486425	EFCAB3	Q8N7B9	438 aa		11.42	□□□□□ -0.58
MUC4-222	ENST00000486425	MAGI3	Q5TCQ9	1506 aa		11.41	□□□□□ -0.58
MUC4-222	ENST00000486425	NUP153	P49790	1475 aa	Known RBP	11.41	□□□□□ -0.58
MUC4-222	ENST00000486425	ERCC6L2	Q5T890	1561 aa		11.41	□□□□□ -0.58
MUC4-222	ENST00000486425	ITSN2	Q9NZM3	1697 aa		11.4	□□□□□ -0.59
MUC4-222	ENST00000486425	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.39	□□□□□ -0.59
MUC4-222	ENST00000486425	CDK13	Q14004	1512 aa	Known RBP	11.37	□□□□□ -0.59
MUC4-222	ENST00000486425	KANK4	Q5T7N3	995 aa	Predicted RBP	11.37	□□□□□ -0.59
MUC4-222	ENST00000486425	JPH4	Q96JJ6	628 aa		11.37	□□□□□ -0.59
MUC4-222	ENST00000486425	STK25	O00506	426 aa		11.36	□□□□□ -0.59
MUC4-222	ENST00000486425	SOX12	O15370	315 aa		11.36	□□□□□ -0.59
MUC4-222	ENST00000486425	P3H3	Q8IVL6	736 aa		11.36	□□□□□ -0.59
MUC4-222	ENST00000486425	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.36	□□□□□ -0.59
MUC4-222	ENST00000486425	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
MUC4-222	ENST00000486425	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.35	□□□□□ -0.59
MUC4-222	ENST00000486425	STK24	Q9Y6E0	443 aa		11.35	□□□□□ -0.59
MUC4-222	ENST00000486425	CDC42BPA	Q5VT25	1732 aa		11.35	□□□□□ -0.59
MUC4-222	ENST00000486425	PRG4	Q92954	1404 aa	Predicted RBP	11.35	□□□□□ -0.59
MUC4-222	ENST00000486425	DPY19L2	Q6NUT2	758 aa		11.34	□□□□□ -0.59
MUC4-222	ENST00000486425	NCOA2	Q15596	1464 aa		11.33	□□□□□ -0.6
MUC4-222	ENST00000486425	PTPN23	Q9H3S7	1636 aa		11.33	□□□□□ -0.6
MUC4-222	ENST00000486425	PLB1	Q6P1J6	1458 aa		11.32	□□□□□ -0.6
MUC4-222	ENST00000486425	PHLDB1	Q86UU1	1377 aa		11.32	□□□□□ -0.6
MUC4-222	ENST00000486425	CCNB3	Q8WWL7	1395 aa		11.32	□□□□□ -0.6
MUC4-222	ENST00000486425	ABCC2	Q92887	1545 aa		11.32	□□□□□ -0.6
MUC4-222	ENST00000486425	UHRF1BP1L	A0JNW5	1464 aa		11.31	□□□□□ -0.6
MUC4-222	ENST00000486425	TCOF1	Q13428	1488 aa	Known RBP	11.31	□□□□□ -0.6
MUC4-222	ENST00000486425	KIF14	Q15058	1648 aa		11.31	□□□□□ -0.6
MUC4-222	ENST00000486425	CROCC2	H7BZ55	1655 aa		11.3	□□□□□ -0.6
MUC4-222	ENST00000486425	GCC2	Q8IWJ2	1684 aa		11.3	□□□□□ -0.6
MUC4-222	ENST00000486425	MTUS2	Q5JR59	1369 aa		11.3	□□□□□ -0.6
MUC4-222	ENST00000486425	MYOM3	Q5VTT5	1437 aa		11.3	□□□□□ -0.6
MUC4-222	ENST00000486425	FGD6	Q6ZV73	1430 aa		11.3	□□□□□ -0.6
MUC4-222	ENST00000486425	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.3	□□□□□ -0.6
MUC4-222	ENST00000486425	SLAIN1	Q8ND83	568 aa		11.28	□□□□□ -0.6
MUC4-222	ENST00000486425	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.28	□□□□□ -0.6
MUC4-222	ENST00000486425	PHF8	Q9UPP1	1060 aa		11.28	□□□□□ -0.6
MUC4-222	ENST00000486425	PREX2	Q70Z35	1606 aa		11.27	□□□□□ -0.6
MUC4-222	ENST00000486425	TRO	Q12816	1431 aa	Predicted RBP	11.27	□□□□□ -0.6
MUC4-222	ENST00000486425	MIA2	Q96PC5	1412 aa		11.27	□□□□□ -0.6
MUC4-222	ENST00000486425	ADGB	Q8N7X0	1667 aa		11.27	□□□□□ -0.6
MUC4-222	ENST00000486425	HRC	P23327	699 aa		11.27	□□□□□ -0.61
MUC4-222	ENST00000486425	MS4A4A	Q96JQ5	239 aa		11.27	□□□□□ -0.61
MUC4-222	ENST00000486425	BOLA1	Q9Y3E2	137 aa		11.27	□□□□□ -0.61
MUC4-222	ENST00000486425	MYO5C	Q9NQX4	1742 aa		11.26	□□□□□ -0.61
MUC4-222	ENST00000486425	CDC42BPB	Q9Y5S2	1711 aa		11.26	□□□□□ -0.61
MUC4-222	ENST00000486425	NLRP6	P59044	892 aa		11.26	□□□□□ -0.61
MUC4-222	ENST00000486425	DNMT1	P26358	1616 aa	Known RBP	11.26	□□□□□ -0.61
MUC4-222	ENST00000486425	PTPRG	P23470	1445 aa		11.26	□□□□□ -0.61
MUC4-222	ENST00000486425	UACA	Q9BZF9	1416 aa		11.26	□□□□□ -0.61
MUC4-222	ENST00000486425	ATP10B	O94823	1461 aa		11.25	□□□□□ -0.61
MUC4-222	ENST00000486425	C3orf67	Q6ZVT6	689 aa		11.25	□□□□□ -0.61
MUC4-222	ENST00000486425	HS6ST3	Q8IZP7	471 aa		11.25	□□□□□ -0.61
MUC4-222	ENST00000486425	FBXO22	Q8NEZ5	403 aa		11.25	□□□□□ -0.61
MUC4-222	ENST00000486425	MFRP	Q9BY79	579 aa		11.25	□□□□□ -0.61
MUC4-222	ENST00000486425	ABCC10	Q5T3U5	1492 aa		11.25	□□□□□ -0.61
MUC4-222	ENST00000486425	KDM5B	Q9UGL1	1544 aa		11.25	□□□□□ -0.61
MUC4-222	ENST00000486425	KIF13A	Q9H1H9	1805 aa		11.24	□□□□□ -0.61
MUC4-222	ENST00000486425	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.24	□□□□□ -0.61
MUC4-222	ENST00000486425		G3V3G9	751 aa		11.23	□□□□□ -0.61
MUC4-222	ENST00000486425	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.23	□□□□□ -0.61
MUC4-222	ENST00000486425	MAPKBP1	O60336	1514 aa		11.23	□□□□□ -0.61
MUC4-222	ENST00000486425	AKNA	Q7Z591	1439 aa		11.21	□□□□□ -0.61
MUC4-222	ENST00000486425	FAM69C	Q0P6D2	419 aa		11.21	□□□□□ -0.61
MUC4-222	ENST00000486425	CHGA	P10645	457 aa	Known RBP	11.2	□□□□□ -0.62
MUC4-222	ENST00000486425	KDM4F	A0A1W2PPD8	638 aa		11.19	□□□□□ -0.62
MUC4-222	ENST00000486425	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.19	□□□□□ -0.62
MUC4-222	ENST00000486425	TTC37	Q6PGP7	1564 aa		11.19	□□□□□ -0.62
MUC4-222	ENST00000486425	MICALL2	Q8IY33	904 aa		11.18	□□□□□ -0.62
MUC4-222	ENST00000486425	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.18	□□□□□ -0.62
MUC4-222	ENST00000486425	ARHGEF5	Q12774	1597 aa		11.18	□□□□□ -0.62
MUC4-222	ENST00000486425	ARAP3	Q8WWN8	1544 aa		11.18	□□□□□ -0.62
MUC4-222	ENST00000486425	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.18	□□□□□ -0.62
MUC4-222	ENST00000486425	ZEB1	P37275	1124 aa	Predicted RBP	11.17	□□□□□ -0.62
MUC4-222	ENST00000486425	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
MUC4-222	ENST00000486425	CAMSAP2	Q08AD1	1489 aa		11.16	□□□□□ -0.62
MUC4-222	ENST00000486425	ABCA9	Q8IUA7	1624 aa		11.16	□□□□□ -0.62
MUC4-222	ENST00000486425	DIP2B	Q9P265	1576 aa		11.16	□□□□□ -0.62
MUC4-222	ENST00000486425	LCE2D	Q5TA82	110 aa	Predicted RBP	11.15	□□□□□ -0.62
MUC4-222	ENST00000486425	FAM163A	Q96GL9	167 aa	Predicted RBP	11.15	□□□□□ -0.62
MUC4-222	ENST00000486425	HFM1	A2PYH4	1435 aa		11.15	□□□□□ -0.62
MUC4-222	ENST00000486425	SAMD9L	Q8IVG5	1584 aa		11.15	□□□□□ -0.62
MUC4-222	ENST00000486425	SHANK2	Q9UPX8	1470 aa		11.14	□□□□□ -0.63
MUC4-222	ENST00000486425	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.14	□□□□□ -0.63
MUC4-222	ENST00000486425	MAST1	Q9Y2H9	1570 aa		11.13	□□□□□ -0.63
MUC4-222	ENST00000486425	ADGRL2	O95490	1459 aa		11.12	□□□□□ -0.63
MUC4-222	ENST00000486425	CLSPN	Q9HAW4	1339 aa		11.12	□□□□□ -0.63
MUC4-222	ENST00000486425	SETD5	Q9C0A6	1442 aa		11.12	□□□□□ -0.63
MUC4-222	ENST00000486425	SNPH	O15079	494 aa		11.12	□□□□□ -0.63
MUC4-222	ENST00000486425	PTPRK	Q15262	1439 aa		11.11	□□□□□ -0.63
MUC4-222	ENST00000486425	DAPK1	P53355	1430 aa		11.1	□□□□□ -0.63
MUC4-222	ENST00000486425	ROCK1	Q13464	1354 aa		11.1	□□□□□ -0.63
MUC4-222	ENST00000486425	NAIP	Q13075	1403 aa		11.09	□□□□□ -0.63
MUC4-222	ENST00000486425	PLXNC1	O60486	1568 aa		11.09	□□□□□ -0.63
MUC4-222	ENST00000486425	CFAP74	Q9C0B2	1584 aa		11.09	□□□□□ -0.63
MUC4-222	ENST00000486425	WDR7	Q9Y4E6	1490 aa		11.09	□□□□□ -0.63
MUC4-222	ENST00000486425	NKX1-1	Q15270	411 aa	Predicted RBP	11.09	□□□□□ -0.63
MUC4-222	ENST00000486425	DHX57	Q6P158	1386 aa	Known RBP	11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms