RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 KDM5DQ9BY66 1539 aa35.28■■■■□ 3.24
SREBF1-214ENST00000486311 MAST1Q9Y2H9 1570 aa35.28■■■■□ 3.24
SREBF1-214ENST00000486311 ZNF142P52746 1687 aaPredicted RBP35.27■■■■□ 3.24
SREBF1-214ENST00000486311 PLA2R1Q13018 1463 aa35.27■■■■□ 3.24
SREBF1-214ENST00000486311 WASHC2CQ9Y4E1 1318 aa35.27■■■■□ 3.24
SREBF1-214ENST00000486311 APLP2Q06481 763 aa35.25■■■■□ 3.23
SREBF1-214ENST00000486311 NCKAP5LQ9HCH0 1330 aa35.25■■■■□ 3.23
SREBF1-214ENST00000486311 PKD2Q13563 968 aa35.24■■■■□ 3.23
SREBF1-214ENST00000486311 PZPP20742 1482 aa35.23■■■■□ 3.23
SREBF1-214ENST00000486311 FBXO31Q5XUX0 539 aaPredicted RBP35.22■■■■□ 3.23
SREBF1-214ENST00000486311 A2ML1A8K2U0 1454 aa35.22■■■■□ 3.23
SREBF1-214ENST00000486311 TNRQ92752 1358 aa35.21■■■■□ 3.23
SREBF1-214ENST00000486311 TCOF1Q13428 1488 aaKnown RBP35.2■■■■□ 3.23
SREBF1-214ENST00000486311 LTBP4Q8N2S1 1624 aa35.19■■■■□ 3.22
SREBF1-214ENST00000486311 RNF17Q9BXT8 1623 aaKnown RBP35.13■■■■□ 3.21
SREBF1-214ENST00000486311 DNMT1P26358 1616 aaKnown RBP35.12■■■■□ 3.21
SREBF1-214ENST00000486311 EIF2AK4Q9P2K8 1649 aaKnown RBP35.1■■■■□ 3.21
SREBF1-214ENST00000486311 ABCC5O15440 1437 aa35.09■■■■□ 3.21
SREBF1-214ENST00000486311 ABCC3O15438 1527 aa35.08■■■■□ 3.21
SREBF1-214ENST00000486311 IQSEC2Q5JU85 1478 aa35.08■■■■□ 3.21
SREBF1-214ENST00000486311 SHANK2Q9UPX8 1470 aa35.08■■■■□ 3.21
SREBF1-214ENST00000486311 DUOX2Q9NRD8 1548 aa35.07■■■■□ 3.21
SREBF1-214ENST00000486311 PTPN23Q9H3S7 1636 aa35.06■■■■□ 3.2
SREBF1-214ENST00000486311 FGD6Q6ZV73 1430 aa35.06■■■■□ 3.2
SREBF1-214ENST00000486311 ZNF335Q9H4Z2 1342 aaPredicted RBP35.06■■■■□ 3.2
SREBF1-214ENST00000486311 NLRP1Q9C000 1473 aa35.04■■■■□ 3.2
SREBF1-214ENST00000486311 KIF15Q9NS87 1388 aa35.04■■■■□ 3.2
SREBF1-214ENST00000486311 MROH1Q8NDA8 1641 aa35.02■■■■□ 3.2
SREBF1-214ENST00000486311 DAPK1P53355 1430 aa35.01■■■■□ 3.2
SREBF1-214ENST00000486311 ZC3H13Q5T200 1668 aaKnown RBP35.01■■■■□ 3.19
SREBF1-214ENST00000486311 THEMISQ8N1K5 641 aaPredicted RBP34.99■■■■□ 3.19
SREBF1-214ENST00000486311 RRP7BPQ9NSQ0 103 aa34.99■■■■□ 3.19
SREBF1-214ENST00000486311 ERBINQ96RT1 1412 aa34.98■■■■□ 3.19
SREBF1-214ENST00000486311 SPATA31D1Q6ZQQ2 1576 aa34.96■■■■□ 3.19
SREBF1-214ENST00000486311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.96■■■■□ 3.193e-17■■■■■ 34.8
SREBF1-214ENST00000486311 CROCC2H7BZ55 1655 aa34.95■■■■□ 3.19
SREBF1-214ENST00000486311 ANKLE2Q86XL3 938 aa34.94■■■■□ 3.18
SREBF1-214ENST00000486311 ERVK-7P63135 1459 aa34.94■■■■□ 3.18
SREBF1-214ENST00000486311 UGGT1Q9NYU2 1555 aa34.94■■■■□ 3.18
SREBF1-214ENST00000486311 NEURL4Q96JN8 1562 aa34.92■■■■□ 3.18
SREBF1-214ENST00000486311 PRDM15P57071 1507 aaPredicted RBP34.9■■■■□ 3.18
SREBF1-214ENST00000486311 ANKRD30AQ9BXX3 1397 aa34.88■■■■□ 3.17
SREBF1-214ENST00000486311 ARHGAP31Q2M1Z3 1444 aa34.87■■■■□ 3.17
SREBF1-214ENST00000486311 CHIC2Q9UKJ5 165 aa34.86■■■■□ 3.17
SREBF1-214ENST00000486311 POLR1AO95602 1720 aaPredicted RBP34.86■■■■□ 3.17
SREBF1-214ENST00000486311 DISP3Q9P2K9 1392 aa34.84■■■■□ 3.17
SREBF1-214ENST00000486311 MED14O60244 1454 aa34.84■■■■□ 3.17
SREBF1-214ENST00000486311 CEP152O94986 1710 aa34.84■■■■□ 3.17
SREBF1-214ENST00000486311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.82■■■■□ 3.16
SREBF1-214ENST00000486311 NPHP4O75161 1426 aaPredicted RBP34.81■■■■□ 3.16
SREBF1-214ENST00000486311 DEPDC5O75140 1603 aa34.8■■■■□ 3.16
SREBF1-214ENST00000486311 KANK1Q14678 1352 aa34.79■■■■□ 3.16
SREBF1-214ENST00000486311 UBAP1LF5GYI3 381 aa34.79■■■■□ 3.16
SREBF1-214ENST00000486311 ADGRL2O95490 1459 aa34.77■■■■□ 3.16
SREBF1-214ENST00000486311 FAM50AQ14320 339 aaKnown RBP34.76■■■■□ 3.16
SREBF1-214ENST00000486311 CPS1P31327 1500 aa34.76■■■■□ 3.15
SREBF1-214ENST00000486311 LMTK2Q8IWU2 1503 aa34.72■■■■□ 3.15
SREBF1-214ENST00000486311 VWDEQ8N2E2 1590 aa34.71■■■■□ 3.15
SREBF1-214ENST00000486311 ILDR2Q71H61 639 aa34.71■■■■□ 3.15
SREBF1-214ENST00000486311 UBR1Q8IWV7 1749 aa34.67■■■■□ 3.14
SREBF1-214ENST00000486311 IQGAP1P46940 1657 aa34.66■■■■□ 3.14
SREBF1-214ENST00000486311 ARHGAP23Q9P227 1491 aa34.65■■■■□ 3.14
SREBF1-214ENST00000486311 SCAF11Q99590 1463 aaKnown RBP34.64■■■■□ 3.14
SREBF1-214ENST00000486311 SLIT1O75093 1534 aa34.63■■■■□ 3.13
SREBF1-214ENST00000486311 CFAP65Q6ZU64 1925 aaKnown RBP34.63■■■■□ 3.13
SREBF1-214ENST00000486311 ANKRD50Q9ULJ7 1429 aa34.63■■■■□ 3.13
SREBF1-214ENST00000486311 LTKP29376 864 aa34.61■■■■□ 3.13
SREBF1-214ENST00000486311 TXNDC2Q86VQ3 553 aa34.6■■■■□ 3.13
SREBF1-214ENST00000486311 EFCAB6Q5THR3 1501 aa34.57■■■■□ 3.12
SREBF1-214ENST00000486311 TOM1O60784 492 aa34.57■■■■□ 3.12
SREBF1-214ENST00000486311 IDI1Q13907 227 aa34.57■■■■□ 3.12
SREBF1-214ENST00000486311 NOS1P29475 1434 aa34.56■■■■□ 3.12
SREBF1-214ENST00000486311 EID1Q9Y6B2 187 aa34.56■■■■□ 3.12
SREBF1-214ENST00000486311 TMEM2Q9UHN6 1383 aa34.56■■■■□ 3.12
SREBF1-214ENST00000486311 STAG3Q9UJ98 1225 aa34.55■■■■□ 3.12
SREBF1-214ENST00000486311 PIK3C2BO00750 1634 aa34.55■■■■□ 3.12
SREBF1-214ENST00000486311 SOCS7O14512 581 aa34.52■■■■□ 3.12
SREBF1-214ENST00000486311 SYNMO15061 1565 aa34.51■■■■□ 3.12
SREBF1-214ENST00000486311 PIP4K2BP78356 416 aa34.49■■■■□ 3.11
SREBF1-214ENST00000486311 SLC52A1Q9NWF4 448 aa34.49■■■■□ 3.11
SREBF1-214ENST00000486311 LRRC7Q96NW7 1537 aa34.49■■■■□ 3.11
SREBF1-214ENST00000486311 ROCK1Q13464 1354 aa34.49■■■■□ 3.11
SREBF1-214ENST00000486311 RPRD2Q5VT52 1461 aaKnown RBP34.48■■■■□ 3.11
SREBF1-214ENST00000486311 SCAF1Q9H7N4 1312 aaKnown RBP34.48■■■■□ 3.11
SREBF1-214ENST00000486311 KDM5AP29375 1690 aaKnown RBP34.47■■■■□ 3.11
SREBF1-214ENST00000486311 STRCP1A6NGW2 1772 aa34.44■■■■□ 3.1
SREBF1-214ENST00000486311 HSPA1LP34931 641 aa34.42■■■■□ 3.1
SREBF1-214ENST00000486311 ADGRB3O60242 1522 aa34.4■■■■□ 3.1
SREBF1-214ENST00000486311 ALKQ9UM73 1620 aa34.4■■■■□ 3.1
SREBF1-214ENST00000486311 UNC13BO14795 1591 aa34.38■■■■□ 3.09
SREBF1-214ENST00000486311 PPARGC1BQ86YN6 1023 aaKnown RBP34.38■■■■□ 3.09
SREBF1-214ENST00000486311 TET3O43151 1660 aa34.38■■■■□ 3.09
SREBF1-214ENST00000486311 ITGAEP38570 1179 aa34.33■■■■□ 3.09
SREBF1-214ENST00000486311 SLC26A8Q96RN1 970 aa34.29■■■■□ 3.08
SREBF1-214ENST00000486311 KCNA6P17658 529 aa34.28■■■■□ 3.08
SREBF1-214ENST00000486311 GCC2Q8IWJ2 1684 aa34.27■■■■□ 3.08
SREBF1-214ENST00000486311 ZFYVE9O95405 1425 aa34.26■■■■□ 3.07
SREBF1-214ENST00000486311 NUP155O75694 1391 aa34.25■■■■□ 3.07
SREBF1-214ENST00000486311 IQGAP3Q86VI3 1631 aa34.24■■■■□ 3.07
SREBF1-214ENST00000486311 MED1Q15648 1581 aaPredicted RBP34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms