RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 PPP1R3GB7ZBB8 358 aa10.93□□□□□ -0.66
SPTA1-207ENST00000485680 PROX2Q3B8N5 592 aa10.92□□□□□ -0.66
SPTA1-207ENST00000485680 ANKK1Q8NFD2 765 aa10.92□□□□□ -0.66
SPTA1-207ENST00000485680 PCDHGA10Q9Y5H3 936 aa10.92□□□□□ -0.66
SPTA1-207ENST00000485680 COL9A1P20849 921 aa10.91□□□□□ -0.66
SPTA1-207ENST00000485680 MAP3K9P80192 1104 aa10.91□□□□□ -0.66
SPTA1-207ENST00000485680 TSHZ2Q9NRE2 1034 aa10.91□□□□□ -0.66
SPTA1-207ENST00000485680 LARP6Q9BRS8 491 aaKnown RBP10.9□□□□□ -0.66
SPTA1-207ENST00000485680 BCAMP50895 628 aa10.89□□□□□ -0.67
SPTA1-207ENST00000485680 VSIG10Q8N0Z9 540 aa10.89□□□□□ -0.67
SPTA1-207ENST00000485680 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
SPTA1-207ENST00000485680 SOWAHBA6NEL2 793 aa10.88□□□□□ -0.67
SPTA1-207ENST00000485680 LAPTM4BQ86VI4 370 aa10.88□□□□□ -0.67
SPTA1-207ENST00000485680 DDX27Q96GQ7 796 aaKnown RBP10.88□□□□□ -0.67
SPTA1-207ENST00000485680 EMILIN3Q9NT22 766 aa10.88□□□□□ -0.67
SPTA1-207ENST00000485680 MFSD10Q14728 455 aa10.86□□□□□ -0.67
SPTA1-207ENST00000485680 Q6ZNB5 142 aa10.86□□□□□ -0.67
SPTA1-207ENST00000485680 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
SPTA1-207ENST00000485680 NYAP1Q6ZVC0 841 aa10.85□□□□□ -0.67
SPTA1-207ENST00000485680 ZFRQ96KR1 1074 aaKnown RBP10.84□□□□□ -0.67
SPTA1-207ENST00000485680 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
SPTA1-207ENST00000485680 FBXW7Q969H0 707 aa10.83□□□□□ -0.68
SPTA1-207ENST00000485680 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
SPTA1-207ENST00000485680 ONECUT3O60422 494 aaPredicted RBP10.82□□□□□ -0.68
SPTA1-207ENST00000485680 PHF14O94880 888 aa10.82□□□□□ -0.68
SPTA1-207ENST00000485680 KCNC4Q03721 635 aa10.82□□□□□ -0.68
SPTA1-207ENST00000485680 TYW1BQ6NUM6 668 aa10.82□□□□□ -0.68
SPTA1-207ENST00000485680 C6orf132Q5T0Z8 1188 aa10.77□□□□□ -0.69
SPTA1-207ENST00000485680 SEPT9Q9UHD8 586 aaPredicted RBP10.77□□□□□ -0.69
SPTA1-207ENST00000485680 LCE2BO14633 110 aa10.76□□□□□ -0.69
SPTA1-207ENST00000485680 TSR3Q9UJK0 312 aaKnown RBP10.74□□□□□ -0.69
SPTA1-207ENST00000485680 TRIM6-TRIM34B2RNG4 842 aa10.73□□□□□ -0.69
SPTA1-207ENST00000485680 LAPTM4AQ15012 233 aa10.73□□□□□ -0.69
SPTA1-207ENST00000485680 FAM98CQ17RN3 349 aaKnown RBP10.73□□□□□ -0.69
SPTA1-207ENST00000485680 EPAS1Q99814 870 aa10.73□□□□□ -0.69
SPTA1-207ENST00000485680 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.71□□□□□ -0.69
SPTA1-207ENST00000485680 HPS5Q9UPZ3 1129 aa10.71□□□□□ -0.69
SPTA1-207ENST00000485680 CADPS2Q86UW7 1296 aa10.7□□□□□ -0.7
SPTA1-207ENST00000485680 GFRA3O60609 400 aa10.69□□□□□ -0.7
SPTA1-207ENST00000485680 TRAF7Q6Q0C0 670 aa10.69□□□□□ -0.7
SPTA1-207ENST00000485680 LRCH3Q96II8 777 aa10.69□□□□□ -0.7
SPTA1-207ENST00000485680 CAMK2BQ13554 666 aa10.68□□□□□ -0.7
SPTA1-207ENST00000485680 RBM33Q96EV2 1170 aaKnown RBP10.66□□□□□ -0.7
SPTA1-207ENST00000485680 BCANQ96GW7 911 aa10.66□□□□□ -0.7
SPTA1-207ENST00000485680 DPYSL4O14531 572 aa10.64□□□□□ -0.71
SPTA1-207ENST00000485680 TJAP1Q5JTD0 557 aa10.64□□□□□ -0.71
SPTA1-207ENST00000485680 TSKSQ9UJT2 592 aa10.63□□□□□ -0.71
SPTA1-207ENST00000485680 PPP4CP60510 307 aa10.61□□□□□ -0.71
SPTA1-207ENST00000485680 PACS2Q86VP3 889 aa10.61□□□□□ -0.71
SPTA1-207ENST00000485680 DDX12PQ92771 950 aa10.61□□□□□ -0.71
SPTA1-207ENST00000485680 PRKD2Q9BZL6 878 aa10.6□□□□□ -0.71
SPTA1-207ENST00000485680 NRG2O14511 850 aaPredicted RBP10.58□□□□□ -0.72
SPTA1-207ENST00000485680 EN1Q05925 392 aaPredicted RBP10.57□□□□□ -0.72
SPTA1-207ENST00000485680 TSR1Q2NL82 804 aaKnown RBP10.57□□□□□ -0.72
SPTA1-207ENST00000485680 PPP1R18Q6NYC8 613 aa10.56□□□□□ -0.72
SPTA1-207ENST00000485680 SAMD7Q7Z3H4 446 aa10.55□□□□□ -0.72
SPTA1-207ENST00000485680 MTRQ99707 1265 aa10.55□□□□□ -0.72
SPTA1-207ENST00000485680 V9GY48 417 aaPredicted RBP10.55□□□□□ -0.72
SPTA1-207ENST00000485680 SMAPO00193 183 aa10.54□□□□□ -0.72
SPTA1-207ENST00000485680 IL21Q9HBE4 155 aa10.54□□□□□ -0.72
SPTA1-207ENST00000485680 FAM198AQ9UFP1 575 aa10.54□□□□□ -0.72
SPTA1-207ENST00000485680 MAP3K7O43318 606 aa10.53□□□□□ -0.72
SPTA1-207ENST00000485680 NBR1Q14596 966 aa10.53□□□□□ -0.72
SPTA1-207ENST00000485680 C3orf80F5H4A9 247 aa10.52□□□□□ -0.73
SPTA1-207ENST00000485680 ZNF516Q92618 1163 aa10.52□□□□□ -0.73
SPTA1-207ENST00000485680 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
SPTA1-207ENST00000485680 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.51□□□□□ -0.73
SPTA1-207ENST00000485680 PRSS12P56730 875 aa10.5□□□□□ -0.73
SPTA1-207ENST00000485680 PDIA6Q15084 440 aa10.48□□□□□ -0.73
SPTA1-207ENST00000485680 ZNF787Q6DD87 383 aa10.48□□□□□ -0.73
SPTA1-207ENST00000485680 TATDN2Q93075 761 aa10.47□□□□□ -0.73
SPTA1-207ENST00000485680 PRIM1P49642 420 aaKnown RBP10.46□□□□□ -0.73
SPTA1-207ENST00000485680 PRKCSHP14314 528 aaPredicted RBP10.45□□□□□ -0.74
SPTA1-207ENST00000485680 APLP1P51693 650 aa10.45□□□□□ -0.74
SPTA1-207ENST00000485680 NKX2-3Q8TAU0 364 aa10.45□□□□□ -0.74
SPTA1-207ENST00000485680 CERKQ8TCT0 537 aa10.45□□□□□ -0.74
SPTA1-207ENST00000485680 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
SPTA1-207ENST00000485680 PDZRN3Q9UPQ7 1066 aa10.45□□□□□ -0.74
SPTA1-207ENST00000485680 SPDYE16A6NNV3 312 aaPredicted RBP10.43□□□□□ -0.74
SPTA1-207ENST00000485680 NBPF26B4DH59 902 aa10.43□□□□□ -0.74
SPTA1-207ENST00000485680 ZNF775Q96BV0 537 aaPredicted RBP10.42□□□□□ -0.74
SPTA1-207ENST00000485680 WDR70Q9NW82 654 aa10.41□□□□□ -0.74
SPTA1-207ENST00000485680 HDGFP51858 240 aaKnown RBP10.39□□□□□ -0.75
SPTA1-207ENST00000485680 NUDT18Q6ZVK8 323 aa10.39□□□□□ -0.75
SPTA1-207ENST00000485680 RNF40O75150 1001 aa10.38□□□□□ -0.75
SPTA1-207ENST00000485680 KCNV2Q8TDN2 545 aa10.38□□□□□ -0.75
SPTA1-207ENST00000485680 TPRNQ4KMQ1 711 aa10.37□□□□□ -0.75
SPTA1-207ENST00000485680 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
SPTA1-207ENST00000485680 GGCXP38435 758 aa10.36□□□□□ -0.75
SPTA1-207ENST00000485680 GRXCR2A6NFK2 248 aa10.35□□□□□ -0.75
SPTA1-207ENST00000485680 COPS2P61201 443 aa10.35□□□□□ -0.75
SPTA1-207ENST00000485680 TRIM67Q6ZTA4 783 aa10.35□□□□□ -0.75
SPTA1-207ENST00000485680 P3H3Q8IVL6 736 aa10.35□□□□□ -0.75
SPTA1-207ENST00000485680 CDHR5Q9HBB8 845 aa10.35□□□□□ -0.75
SPTA1-207ENST00000485680 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
SPTA1-207ENST00000485680 OSBPP22059 807 aa10.34□□□□□ -0.75
SPTA1-207ENST00000485680 TTC13Q8NBP0 860 aa10.33□□□□□ -0.76
SPTA1-207ENST00000485680 ARIH1Q9Y4X5 557 aaPredicted RBP10.33□□□□□ -0.76
SPTA1-207ENST00000485680 ZPR1O75312 459 aa10.32□□□□□ -0.76
SPTA1-207ENST00000485680 SWT1Q5T5J6 900 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms