RNA–Protein interactions for RNA: ENST00000485672.2

ATP1A3-206, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 3

Gene ATP1A3, Length 970 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-206ENST00000485672 KDM5DQ9BY66 1539 aa29.92■■■□□ 2.38
ATP1A3-206ENST00000485672 MIA2Q96PC5 1412 aa29.92■■■□□ 2.38
ATP1A3-206ENST00000485672 MAST1Q9Y2H9 1570 aa29.92■■■□□ 2.38
ATP1A3-206ENST00000485672 PLA2R1Q13018 1463 aa29.87■■■□□ 2.37
ATP1A3-206ENST00000485672 WASHC2CQ9Y4E1 1318 aa29.85■■■□□ 2.37
ATP1A3-206ENST00000485672 PZPP20742 1482 aa29.85■■■□□ 2.37
ATP1A3-206ENST00000485672 APLP2Q06481 763 aa29.84■■■□□ 2.37
ATP1A3-206ENST00000485672 NCKAP5LQ9HCH0 1330 aa29.84■■■□□ 2.37
ATP1A3-206ENST00000485672 A2ML1A8K2U0 1454 aa29.84■■■□□ 2.37
ATP1A3-206ENST00000485672 LTBP4Q8N2S1 1624 aa29.83■■■□□ 2.37
ATP1A3-206ENST00000485672 RNF17Q9BXT8 1623 aaKnown RBP29.82■■■□□ 2.36
ATP1A3-206ENST00000485672 TCOF1Q13428 1488 aaKnown RBP29.81■■■□□ 2.36
ATP1A3-206ENST00000485672 PKD2Q13563 968 aa29.81■■■□□ 2.36
ATP1A3-206ENST00000485672 DNMT1P26358 1616 aaKnown RBP29.81■■■□□ 2.36
ATP1A3-206ENST00000485672 TNRQ92752 1358 aa29.8■■■□□ 2.36
ATP1A3-206ENST00000485672 FBXO31Q5XUX0 539 aaPredicted RBP29.8■■■□□ 2.36
ATP1A3-206ENST00000485672 EIF2AK4Q9P2K8 1649 aaKnown RBP29.8■■■□□ 2.36
ATP1A3-206ENST00000485672 PTPN23Q9H3S7 1636 aa29.76■■■□□ 2.35
ATP1A3-206ENST00000485672 ZC3H13Q5T200 1668 aaKnown RBP29.76■■■□□ 2.35
ATP1A3-206ENST00000485672 CROCC2H7BZ55 1655 aa29.75■■■□□ 2.35
ATP1A3-206ENST00000485672 ABCC3O15438 1527 aa29.73■■■□□ 2.35
ATP1A3-206ENST00000485672 DUOX2Q9NRD8 1548 aa29.73■■■□□ 2.35
ATP1A3-206ENST00000485672 IQSEC2Q5JU85 1478 aa29.72■■■□□ 2.35
ATP1A3-206ENST00000485672 SHANK2Q9UPX8 1470 aa29.72■■■□□ 2.35
ATP1A3-206ENST00000485672 MROH1Q8NDA8 1641 aa29.71■■■□□ 2.35
ATP1A3-206ENST00000485672 POLR1AO95602 1720 aaPredicted RBP29.7■■■□□ 2.34
ATP1A3-206ENST00000485672 ABCC5O15440 1437 aa29.7■■■□□ 2.34
ATP1A3-206ENST00000485672 ZNF335Q9H4Z2 1342 aaPredicted RBP29.69■■■□□ 2.34
ATP1A3-206ENST00000485672 NLRP1Q9C000 1473 aa29.68■■■□□ 2.34
ATP1A3-206ENST00000485672 FGD6Q6ZV73 1430 aa29.68■■■□□ 2.34
ATP1A3-206ENST00000485672 KIF15Q9NS87 1388 aa29.66■■■□□ 2.34
ATP1A3-206ENST00000485672 CEP152O94986 1710 aa29.66■■■□□ 2.34
ATP1A3-206ENST00000485672 DAPK1P53355 1430 aa29.65■■■□□ 2.34
ATP1A3-206ENST00000485672 SPATA31D1Q6ZQQ2 1576 aa29.64■■■□□ 2.33
ATP1A3-206ENST00000485672 NEURL4Q96JN8 1562 aa29.63■■■□□ 2.33
ATP1A3-206ENST00000485672 UGGT1Q9NYU2 1555 aa29.63■■■□□ 2.33
ATP1A3-206ENST00000485672 ERBINQ96RT1 1412 aa29.62■■■□□ 2.33
ATP1A3-206ENST00000485672 THEMISQ8N1K5 641 aaPredicted RBP29.61■■■□□ 2.33
ATP1A3-206ENST00000485672 RRP7BPQ9NSQ0 103 aa29.61■■■□□ 2.33
ATP1A3-206ENST00000485672 ERVK-7P63135 1459 aa29.61■■■□□ 2.33
ATP1A3-206ENST00000485672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.6■■■□□ 2.33
ATP1A3-206ENST00000485672 PRDM15P57071 1507 aaPredicted RBP29.6■■■□□ 2.33
ATP1A3-206ENST00000485672 CFAP65Q6ZU64 1925 aaKnown RBP29.57■■■□□ 2.32
ATP1A3-206ENST00000485672 ANKLE2Q86XL3 938 aa29.56■■■□□ 2.32
ATP1A3-206ENST00000485672 DEPDC5O75140 1603 aa29.54■■■□□ 2.32
ATP1A3-206ENST00000485672 ANKRD30AQ9BXX3 1397 aa29.52■■■□□ 2.32
ATP1A3-206ENST00000485672 CHIC2Q9UKJ5 165 aa29.51■■■□□ 2.31
ATP1A3-206ENST00000485672 ARHGAP31Q2M1Z3 1444 aa29.5■■■□□ 2.31
ATP1A3-206ENST00000485672 MED14O60244 1454 aa29.49■■■□□ 2.31
ATP1A3-206ENST00000485672 NPHP4O75161 1426 aaPredicted RBP29.48■■■□□ 2.31
ATP1A3-206ENST00000485672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.48■■■□□ 2.31
ATP1A3-206ENST00000485672 UBR1Q8IWV7 1749 aa29.48■■■□□ 2.31
ATP1A3-206ENST00000485672 KANK1Q14678 1352 aa29.47■■■□□ 2.31
ATP1A3-206ENST00000485672 IQGAP1P46940 1657 aa29.47■■■□□ 2.31
ATP1A3-206ENST00000485672 CPS1P31327 1500 aa29.46■■■□□ 2.31
ATP1A3-206ENST00000485672 UBAP1LF5GYI3 381 aa29.46■■■□□ 2.31
ATP1A3-206ENST00000485672 VWDEQ8N2E2 1590 aa29.44■■■□□ 2.3
ATP1A3-206ENST00000485672 ADGRL2O95490 1459 aa29.43■■■□□ 2.3
ATP1A3-206ENST00000485672 FAM50AQ14320 339 aaKnown RBP29.43■■■□□ 2.3
ATP1A3-206ENST00000485672 LMTK2Q8IWU2 1503 aa29.4■■■□□ 2.3
ATP1A3-206ENST00000485672 PIK3C2BO00750 1634 aa29.35■■■□□ 2.29
ATP1A3-206ENST00000485672 SCAF11Q99590 1463 aaKnown RBP29.35■■■□□ 2.29
ATP1A3-206ENST00000485672 SLIT1O75093 1534 aa29.35■■■□□ 2.29
ATP1A3-206ENST00000485672 ARHGAP23Q9P227 1491 aa29.34■■■□□ 2.29
ATP1A3-206ENST00000485672 DISP3Q9P2K9 1392 aa29.33■■■□□ 2.29
ATP1A3-206ENST00000485672 EFCAB6Q5THR3 1501 aa29.32■■■□□ 2.28
ATP1A3-206ENST00000485672 ANKRD50Q9ULJ7 1429 aa29.3■■■□□ 2.28
ATP1A3-206ENST00000485672 STRCP1A6NGW2 1772 aa29.3■■■□□ 2.28
ATP1A3-206ENST00000485672 KDM5AP29375 1690 aaKnown RBP29.29■■■□□ 2.28
ATP1A3-206ENST00000485672 SYNMO15061 1565 aa29.28■■■□□ 2.28
ATP1A3-206ENST00000485672 LTKP29376 864 aa29.28■■■□□ 2.28
ATP1A3-206ENST00000485672 TXNDC2Q86VQ3 553 aa29.28■■■□□ 2.28
ATP1A3-206ENST00000485672 TOM1O60784 492 aa29.27■■■□□ 2.28
ATP1A3-206ENST00000485672 STAG3Q9UJ98 1225 aa29.26■■■□□ 2.27
ATP1A3-206ENST00000485672 EID1Q9Y6B2 187 aa29.25■■■□□ 2.27
ATP1A3-206ENST00000485672 NOS1P29475 1434 aa29.25■■■□□ 2.27
ATP1A3-206ENST00000485672 IDI1Q13907 227 aa29.24■■■□□ 2.27
ATP1A3-206ENST00000485672 TMEM2Q9UHN6 1383 aa29.24■■■□□ 2.27
ATP1A3-206ENST00000485672 SCAF1Q9H7N4 1312 aaKnown RBP29.23■■■□□ 2.27
ATP1A3-206ENST00000485672 LRRC7Q96NW7 1537 aa29.22■■■□□ 2.27
ATP1A3-206ENST00000485672 PIP4K2BP78356 416 aa29.22■■■□□ 2.27
ATP1A3-206ENST00000485672 TET3O43151 1660 aa29.21■■■□□ 2.27
ATP1A3-206ENST00000485672 RPRD2Q5VT52 1461 aaKnown RBP29.2■■■□□ 2.26
ATP1A3-206ENST00000485672 UNC13BO14795 1591 aa29.19■■■□□ 2.26
ATP1A3-206ENST00000485672 ADGRB3O60242 1522 aa29.18■■■□□ 2.26
ATP1A3-206ENST00000485672 ROCK1Q13464 1354 aa29.17■■■□□ 2.26
ATP1A3-206ENST00000485672 ALKQ9UM73 1620 aa29.17■■■□□ 2.26
ATP1A3-206ENST00000485672 GCC2Q8IWJ2 1684 aa29.17■■■□□ 2.26
ATP1A3-206ENST00000485672 SLC52A1Q9NWF4 448 aa29.16■■■□□ 2.26
ATP1A3-206ENST00000485672 HSPA1LP34931 641 aa29.14■■■□□ 2.26
ATP1A3-206ENST00000485672 ILDR2Q71H61 639 aa29.13■■■□□ 2.25
ATP1A3-206ENST00000485672 PPARGC1BQ86YN6 1023 aaKnown RBP29.11■■■□□ 2.25
ATP1A3-206ENST00000485672 MYO5BQ9ULV0 1848 aa29.08■■■□□ 2.25
ATP1A3-206ENST00000485672 XIRP1Q702N8 1843 aaKnown RBP29.08■■■□□ 2.25
ATP1A3-206ENST00000485672 E9PCH4 1651 aa29.07■■■□□ 2.24
ATP1A3-206ENST00000485672 ITGAEP38570 1179 aa29.07■■■□□ 2.24
ATP1A3-206ENST00000485672 IQGAP3Q86VI3 1631 aa29.07■■■□□ 2.24
ATP1A3-206ENST00000485672 TMEM131LA2VDJ0 1609 aa29.03■■■□□ 2.24
ATP1A3-206ENST00000485672 SLC26A8Q96RN1 970 aa29.02■■■□□ 2.24
ATP1A3-206ENST00000485672 ZFYVE9O95405 1425 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms