RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 NLRP6P59044 892 aa12.85□□□□□ -0.35
CLRN1-206ENST00000485607 ZSWIM6Q9HCJ5 1215 aa12.85□□□□□ -0.35
CLRN1-206ENST00000485607 KIF13AQ9H1H9 1805 aa12.85□□□□□ -0.35
CLRN1-206ENST00000485607 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
CLRN1-206ENST00000485607 STK24Q9Y6E0 443 aa12.84□□□□□ -0.35
CLRN1-206ENST00000485607 MAPKBP1O60336 1514 aa12.83□□□□□ -0.36
CLRN1-206ENST00000485607 ABCC10Q5T3U5 1492 aa12.81□□□□□ -0.36
CLRN1-206ENST00000485607 ARSIQ5FYB1 569 aa12.8□□□□□ -0.36
CLRN1-206ENST00000485607 GPR153Q6NV75 609 aa12.8□□□□□ -0.36
CLRN1-206ENST00000485607 IQGAP2Q13576 1575 aa12.8□□□□□ -0.36
CLRN1-206ENST00000485607 DIP2BQ9P265 1576 aa12.8□□□□□ -0.36
CLRN1-206ENST00000485607 TTBK1Q5TCY1 1321 aaPredicted RBP12.8□□□□□ -0.36
CLRN1-206ENST00000485607 FAM69CQ0P6D2 419 aa12.79□□□□□ -0.36
CLRN1-206ENST00000485607 PTPRGP23470 1445 aa12.79□□□□□ -0.36
CLRN1-206ENST00000485607 ZNF687Q8N1G0 1237 aa12.78□□□□□ -0.36
CLRN1-206ENST00000485607 RNF166Q96A37 237 aaPredicted RBP12.78□□□□□ -0.36
CLRN1-206ENST00000485607 STK25O00506 426 aa12.77□□□□□ -0.37
CLRN1-206ENST00000485607 DISP1Q96F81 1524 aa12.77□□□□□ -0.37
CLRN1-206ENST00000485607 TNIKQ9UKE5 1360 aa12.76□□□□□ -0.37
CLRN1-206ENST00000485607 CARMIL2Q6F5E8 1435 aa12.76□□□□□ -0.37
CLRN1-206ENST00000485607 RAPGEF2Q9Y4G8 1499 aa12.76□□□□□ -0.37
CLRN1-206ENST00000485607 MYT1LQ9UL68 1186 aa12.75□□□□□ -0.37
CLRN1-206ENST00000485607 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
CLRN1-206ENST00000485607 ABCC2Q92887 1545 aa12.73□□□□□ -0.37
CLRN1-206ENST00000485607 FBXO22Q8NEZ5 403 aa12.73□□□□□ -0.37
CLRN1-206ENST00000485607 UGGT2Q9NYU1 1516 aa12.72□□□□□ -0.37
CLRN1-206ENST00000485607 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
CLRN1-206ENST00000485607 KHSRPQ92945 711 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLRN1-206ENST00000485607 MFRPQ9BY79 579 aa12.7□□□□□ -0.38
CLRN1-206ENST00000485607 UHRF1BP1LA0JNW5 1464 aa12.7□□□□□ -0.38
CLRN1-206ENST00000485607 KIAA0556O60303 1618 aa12.7□□□□□ -0.38
CLRN1-206ENST00000485607 ASXL2Q76L83 1435 aa12.69□□□□□ -0.38
CLRN1-206ENST00000485607 UACAQ9BZF9 1416 aa12.69□□□□□ -0.38
CLRN1-206ENST00000485607 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
CLRN1-206ENST00000485607 KDM6BO15054 1643 aa12.66□□□□□ -0.38
CLRN1-206ENST00000485607 PRXQ9BXM0 1461 aa12.66□□□□□ -0.38
CLRN1-206ENST00000485607 C2orf72A6NCS6 295 aa12.66□□□□□ -0.38
CLRN1-206ENST00000485607 TSPOAP1O95153 1857 aa12.65□□□□□ -0.38
CLRN1-206ENST00000485607 KDM5BQ9UGL1 1544 aa12.65□□□□□ -0.38
CLRN1-206ENST00000485607 PLB1Q6P1J6 1458 aa12.65□□□□□ -0.38
CLRN1-206ENST00000485607 CTTNBP2Q8WZ74 1663 aa12.64□□□□□ -0.39
CLRN1-206ENST00000485607 GLI2P10070 1586 aa12.63□□□□□ -0.39
CLRN1-206ENST00000485607 PPRC1Q5VV67 1664 aaKnown RBP12.63□□□□□ -0.39
CLRN1-206ENST00000485607 ZCCHC11Q5TAX3 1644 aaKnown RBP12.62□□□□□ -0.39
CLRN1-206ENST00000485607 NUDT7P0C024 238 aa12.62□□□□□ -0.39
CLRN1-206ENST00000485607 PTGER2P43116 358 aa12.62□□□□□ -0.39
CLRN1-206ENST00000485607 TMC2Q8TDI7 906 aa12.62□□□□□ -0.39
CLRN1-206ENST00000485607 EPRSP07814 1512 aaKnown RBP12.62□□□□□ -0.39
CLRN1-206ENST00000485607 RGL2O15211 777 aa12.59□□□□□ -0.39
CLRN1-206ENST00000485607 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
CLRN1-206ENST00000485607 KIF3CO14782 793 aa12.58□□□□□ -0.4
CLRN1-206ENST00000485607 ABCA8O94911 1581 aa12.58□□□□□ -0.4
CLRN1-206ENST00000485607 MAP3K4Q9Y6R4 1608 aa12.58□□□□□ -0.4
CLRN1-206ENST00000485607 COL17A1Q9UMD9 1497 aaPredicted RBP12.58□□□□□ -0.4
CLRN1-206ENST00000485607 LSM11P83369 360 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLRN1-206ENST00000485607 WDR7Q9Y4E6 1490 aa12.57□□□□□ -0.4
CLRN1-206ENST00000485607 KDM4FA0A1W2PPD8 638 aa12.55□□□□□ -0.4
CLRN1-206ENST00000485607 LHX6Q9UPM6 363 aa12.55□□□□□ -0.4
CLRN1-206ENST00000485607 PCDHGA4Q9Y5G9 962 aa12.55□□□□□ -0.4
CLRN1-206ENST00000485607 PKD2Q13563 968 aa12.53□□□□□ -0.4
CLRN1-206ENST00000485607 P3H3Q8IVL6 736 aa12.53□□□□□ -0.4
CLRN1-206ENST00000485607 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
CLRN1-206ENST00000485607 ARID3CA6NKF2 412 aa12.51□□□□□ -0.41
CLRN1-206ENST00000485607 PBX2P40425 430 aa12.51□□□□□ -0.41
CLRN1-206ENST00000485607 TEX14Q8IWB6 1497 aa12.5□□□□□ -0.41
CLRN1-206ENST00000485607 SAMD9Q5K651 1589 aa12.5□□□□□ -0.41
CLRN1-206ENST00000485607 SLC34A2O95436 690 aa12.49□□□□□ -0.41
CLRN1-206ENST00000485607 KCNH8Q96L42 1107 aa12.49□□□□□ -0.41
CLRN1-206ENST00000485607 PPP1R37O75864 691 aa12.48□□□□□ -0.41
CLRN1-206ENST00000485607 ATP10BO94823 1461 aa12.47□□□□□ -0.41
CLRN1-206ENST00000485607 CD109Q6YHK3 1445 aa12.47□□□□□ -0.41
CLRN1-206ENST00000485607 FAM9AQ8IZU1 332 aaPredicted RBP12.47□□□□□ -0.41
CLRN1-206ENST00000485607 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
CLRN1-206ENST00000485607 EEA1Q15075 1411 aa12.46□□□□□ -0.41
CLRN1-206ENST00000485607 ADGRL1O94910 1474 aa12.46□□□□□ -0.42
CLRN1-206ENST00000485607 CFAP43Q8NDM7 1665 aa12.45□□□□□ -0.42
CLRN1-206ENST00000485607 RANGAP1P46060 587 aaPredicted RBP12.45□□□□□ -0.42
CLRN1-206ENST00000485607 FHOD3Q2V2M9 1422 aa12.44□□□□□ -0.42
CLRN1-206ENST00000485607 RAPGEF6Q8TEU7 1601 aa12.43□□□□□ -0.42
CLRN1-206ENST00000485607 NUP153P49790 1475 aaKnown RBP12.42□□□□□ -0.42
CLRN1-206ENST00000485607 POTEEQ6S8J3 1075 aa12.42□□□□□ -0.42
CLRN1-206ENST00000485607 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
CLRN1-206ENST00000485607 ARHGAP33O14559 1287 aa12.4□□□□□ -0.42
CLRN1-206ENST00000485607 KIF21BO75037 1637 aa12.4□□□□□ -0.42
CLRN1-206ENST00000485607 ABCA9Q8IUA7 1624 aa12.39□□□□□ -0.43
CLRN1-206ENST00000485607 PLPP6Q8IY26 295 aa12.37□□□□□ -0.43
CLRN1-206ENST00000485607 ARAP3Q8WWN8 1544 aa12.37□□□□□ -0.43
CLRN1-206ENST00000485607 ADGRD1Q6QNK2 874 aa12.36□□□□□ -0.43
CLRN1-206ENST00000485607 TBC1D12O60347 775 aa12.35□□□□□ -0.43
CLRN1-206ENST00000485607 STAC3Q96MF2 364 aa12.35□□□□□ -0.43
CLRN1-206ENST00000485607 HCSTQ9UBK5 93 aa12.35□□□□□ -0.43
CLRN1-206ENST00000485607 EFCAB5A4FU69 1503 aa12.35□□□□□ -0.43
CLRN1-206ENST00000485607 PTCD2Q8WV60 388 aaKnown RBP12.34□□□□□ -0.43
CLRN1-206ENST00000485607 FOXK1P85037 733 aa12.33□□□□□ -0.44
CLRN1-206ENST00000485607 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
CLRN1-206ENST00000485607 PSEN2P49810 448 aa12.32□□□□□ -0.44
CLRN1-206ENST00000485607 PLA2G2EQ9NZK7 142 aa12.32□□□□□ -0.44
CLRN1-206ENST00000485607 FRMPD1Q5SYB0 1578 aa12.31□□□□□ -0.44
CLRN1-206ENST00000485607 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
CLRN1-206ENST00000485607 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms