RNA–Protein interactions for RNA: ENST00000485136.5

CNOT10-217, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 608 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-217ENST00000485136 NPDC1Q9NQX5 325 aaPredicted RBP13.22□□□□□ -0.29
CNOT10-217ENST00000485136 TSR1Q2NL82 804 aaKnown RBP13.21□□□□□ -0.29
CNOT10-217ENST00000485136 ARSIQ5FYB1 569 aa13.21□□□□□ -0.29
CNOT10-217ENST00000485136 AMHR2Q16671 573 aa13.2□□□□□ -0.3
CNOT10-217ENST00000485136 KHSRPQ92945 711 aaKnown RBP eCLIP13.2□□□□□ -0.3
CNOT10-217ENST00000485136 ZSWIM6Q9HCJ5 1215 aa13.2□□□□□ -0.3
CNOT10-217ENST00000485136 ZNF454Q8N9F8 522 aa13.19□□□□□ -0.3
CNOT10-217ENST00000485136 DAXXQ9UER7 740 aaPredicted RBP13.19□□□□□ -0.3
CNOT10-217ENST00000485136 POTEMA6NI47 508 aa13.17□□□□□ -0.3
CNOT10-217ENST00000485136 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
CNOT10-217ENST00000485136 IL27Q8NEV9 243 aa13.17□□□□□ -0.3
CNOT10-217ENST00000485136 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
CNOT10-217ENST00000485136 PARP9Q8IXQ6 854 aa13.16□□□□□ -0.3
CNOT10-217ENST00000485136 ZDHHC16Q969W1 377 aa13.16□□□□□ -0.3
CNOT10-217ENST00000485136 TIMELESSQ9UNS1 1208 aa13.16□□□□□ -0.3
CNOT10-217ENST00000485136 PCDH10Q9P2E7 1040 aa13.15□□□□□ -0.3
CNOT10-217ENST00000485136 C6orf132Q5T0Z8 1188 aa13.13□□□□□ -0.31
CNOT10-217ENST00000485136 POTEGQ6S5H5 508 aa13.13□□□□□ -0.31
CNOT10-217ENST00000485136 TTLL12Q14166 644 aaPredicted RBP13.12□□□□□ -0.31
CNOT10-217ENST00000485136 ERICH6Q7L0X2 663 aa13.11□□□□□ -0.31
CNOT10-217ENST00000485136 CERKQ8TCT0 537 aa13.11□□□□□ -0.31
CNOT10-217ENST00000485136 ADAM33Q9BZ11 813 aa13.11□□□□□ -0.31
CNOT10-217ENST00000485136 FAM117AQ9C073 453 aa13.1□□□□□ -0.31
CNOT10-217ENST00000485136 FAM163AQ96GL9 167 aaPredicted RBP13.09□□□□□ -0.31
CNOT10-217ENST00000485136 LHX6Q9UPM6 363 aa13.09□□□□□ -0.31
CNOT10-217ENST00000485136 SNPHO15079 494 aa13.07□□□□□ -0.32
CNOT10-217ENST00000485136 PADI6Q6TGC4 694 aa13.07□□□□□ -0.32
CNOT10-217ENST00000485136 DDRGK1Q96HY6 314 aa13.07□□□□□ -0.32
CNOT10-217ENST00000485136 PPP4R3BQ5MIZ7 849 aa13.05□□□□□ -0.32
CNOT10-217ENST00000485136 GIGYF2Q6Y7W6 1299 aaKnown RBP13.05□□□□□ -0.32
CNOT10-217ENST00000485136 RBM27Q9P2N5 1060 aaKnown RBP13.05□□□□□ -0.32
CNOT10-217ENST00000485136 PSDA5PKW4 1024 aaPredicted RBP13.04□□□□□ -0.32
CNOT10-217ENST00000485136 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
CNOT10-217ENST00000485136 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
CNOT10-217ENST00000485136 LCE2DQ5TA82 110 aaPredicted RBP13.03□□□□□ -0.32
CNOT10-217ENST00000485136 CLCN1P35523 988 aa13.02□□□□□ -0.33
CNOT10-217ENST00000485136 C14orf37Q86TY3 774 aa13.02□□□□□ -0.33
CNOT10-217ENST00000485136 PHOX2BQ99453 314 aa13.02□□□□□ -0.33
CNOT10-217ENST00000485136 REPIN1Q9BWE0 567 aaKnown RBP13.02□□□□□ -0.33
CNOT10-217ENST00000485136 OATP04181 439 aa13.01□□□□□ -0.33
CNOT10-217ENST00000485136 TTC13Q8NBP0 860 aa13.01□□□□□ -0.33
CNOT10-217ENST00000485136 ADGRG1Q9Y653 693 aa13.01□□□□□ -0.33
CNOT10-217ENST00000485136 HOXB1P14653 301 aaPredicted RBP13□□□□□ -0.33
CNOT10-217ENST00000485136 PRSS12P56730 875 aa13□□□□□ -0.33
CNOT10-217ENST00000485136 MDM2Q00987 491 aaPredicted RBP13□□□□□ -0.33
CNOT10-217ENST00000485136 METTL3Q86U44 580 aaKnown RBP13□□□□□ -0.33
CNOT10-217ENST00000485136 BCL2L12Q9HB09 334 aa13□□□□□ -0.33
CNOT10-217ENST00000485136 MS4A1P11836 297 aa12.99□□□□□ -0.33
CNOT10-217ENST00000485136 CDCA7LQ96GN5 454 aa12.99□□□□□ -0.33
CNOT10-217ENST00000485136 TMUB1Q9BVT8 246 aa12.99□□□□□ -0.33
CNOT10-217ENST00000485136 GPCPD1Q9NPB8 672 aa12.99□□□□□ -0.33
CNOT10-217ENST00000485136 PXYLP1Q8TE99 480 aa12.98□□□□□ -0.33
CNOT10-217ENST00000485136 COL9A1P20849 921 aa12.96□□□□□ -0.33
CNOT10-217ENST00000485136 PTPREP23469 700 aa12.95□□□□□ -0.34
CNOT10-217ENST00000485136 NLRP7Q8WX94 980 aa12.95□□□□□ -0.34
CNOT10-217ENST00000485136 PPP1R3GB7ZBB8 358 aa12.94□□□□□ -0.34
CNOT10-217ENST00000485136 PLSCR2Q9NRY7 297 aa12.93□□□□□ -0.34
CNOT10-217ENST00000485136 RBM46Q8TBY0 533 aaKnown RBP12.92□□□□□ -0.34
CNOT10-217ENST00000485136 SSTR3P32745 418 aaPredicted RBP12.91□□□□□ -0.34
CNOT10-217ENST00000485136 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
CNOT10-217ENST00000485136 ST18O60284 1047 aa12.9□□□□□ -0.34
CNOT10-217ENST00000485136 FAM217BQ9NTX9 383 aaPredicted RBP12.9□□□□□ -0.34
CNOT10-217ENST00000485136 GOPCQ9HD26 462 aa12.89□□□□□ -0.35
CNOT10-217ENST00000485136 TSKSQ9UJT2 592 aa12.88□□□□□ -0.35
CNOT10-217ENST00000485136 KCNK17Q96T54 332 aa12.86□□□□□ -0.35
CNOT10-217ENST00000485136 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
CNOT10-217ENST00000485136 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.85□□□□□ -0.35
CNOT10-217ENST00000485136 TRIM6-TRIM34B2RNG4 842 aa12.85□□□□□ -0.35
CNOT10-217ENST00000485136 EYA1Q99502 592 aa12.85□□□□□ -0.35
CNOT10-217ENST00000485136 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
CNOT10-217ENST00000485136 KCNH8Q96L42 1107 aa12.84□□□□□ -0.35
CNOT10-217ENST00000485136 RCCD1A6NED2 376 aa12.83□□□□□ -0.36
CNOT10-217ENST00000485136 SH3D19Q5HYK7 790 aa12.83□□□□□ -0.36
CNOT10-217ENST00000485136 NUDT18Q6ZVK8 323 aa12.83□□□□□ -0.36
CNOT10-217ENST00000485136 PCMTD1Q96MG8 357 aaPredicted RBP12.83□□□□□ -0.36
CNOT10-217ENST00000485136 PACS2Q86VP3 889 aa12.82□□□□□ -0.36
CNOT10-217ENST00000485136 C3orf80F5H4A9 247 aa12.81□□□□□ -0.36
CNOT10-217ENST00000485136 PROX2Q3B8N5 592 aa12.81□□□□□ -0.36
CNOT10-217ENST00000485136 TATDN2Q93075 761 aa12.81□□□□□ -0.36
CNOT10-217ENST00000485136 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
CNOT10-217ENST00000485136 PNMA3Q9UL41 463 aa12.81□□□□□ -0.36
CNOT10-217ENST00000485136 DNAJB2P25686 324 aa12.79□□□□□ -0.36
CNOT10-217ENST00000485136 ERBB3P21860 1342 aa12.79□□□□□ -0.36
CNOT10-217ENST00000485136 ONECUT3O60422 494 aaPredicted RBP12.78□□□□□ -0.36
CNOT10-217ENST00000485136 SKIV2LQ15477 1246 aaKnown RBP12.77□□□□□ -0.37
CNOT10-217ENST00000485136 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
CNOT10-217ENST00000485136 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
CNOT10-217ENST00000485136 PSEN2P49810 448 aa12.76□□□□□ -0.37
CNOT10-217ENST00000485136 ZBED2Q9BTP6 218 aa12.76□□□□□ -0.37
CNOT10-217ENST00000485136 SMAPO00193 183 aa12.75□□□□□ -0.37
CNOT10-217ENST00000485136 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
CNOT10-217ENST00000485136 TMEM134Q9H6X4 195 aa12.74□□□□□ -0.37
CNOT10-217ENST00000485136 ARHGAP33O14559 1287 aa12.73□□□□□ -0.37
CNOT10-217ENST00000485136 MYSM1Q5VVJ2 828 aa12.73□□□□□ -0.37
CNOT10-217ENST00000485136 KIAA1468Q9P260 1216 aa12.73□□□□□ -0.37
CNOT10-217ENST00000485136 EMP3P54852 163 aa12.72□□□□□ -0.37
CNOT10-217ENST00000485136 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
CNOT10-217ENST00000485136 DDX11L8A8MPP1 907 aa12.71□□□□□ -0.37
CNOT10-217ENST00000485136 CD46P15529 392 aa12.71□□□□□ -0.37
CNOT10-217ENST00000485136 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms