RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 KIAA1468Q9P260 1216 aa12.31□□□□□ -0.44
VPS8-223ENST00000485024 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
VPS8-223ENST00000485024 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
VPS8-223ENST00000485024 HS6ST3Q8IZP7 471 aa12.28□□□□□ -0.44
VPS8-223ENST00000485024 PRKD2Q9BZL6 878 aa12.28□□□□□ -0.44
VPS8-223ENST00000485024 ZNF787Q6DD87 383 aa12.27□□□□□ -0.45
VPS8-223ENST00000485024 ZNF775Q96BV0 537 aaPredicted RBP12.25□□□□□ -0.45
VPS8-223ENST00000485024 HPS5Q9UPZ3 1129 aa12.25□□□□□ -0.45
VPS8-223ENST00000485024 TSR3Q9UJK0 312 aaKnown RBP12.24□□□□□ -0.45
VPS8-223ENST00000485024 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
VPS8-223ENST00000485024 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.21□□□□□ -0.45
VPS8-223ENST00000485024 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
VPS8-223ENST00000485024 MAP3K9P80192 1104 aa12.2□□□□□ -0.46
VPS8-223ENST00000485024 TYW1BQ6NUM6 668 aa12.2□□□□□ -0.46
VPS8-223ENST00000485024 FAM98CQ17RN3 349 aaKnown RBP12.19□□□□□ -0.46
VPS8-223ENST00000485024 PDE4AP27815 886 aa12.18□□□□□ -0.46
VPS8-223ENST00000485024 TJAP1Q5JTD0 557 aa12.18□□□□□ -0.46
VPS8-223ENST00000485024 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
VPS8-223ENST00000485024 LRCH3Q96II8 777 aa12.18□□□□□ -0.46
VPS8-223ENST00000485024 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
VPS8-223ENST00000485024 TRIM6-TRIM34B2RNG4 842 aa12.16□□□□□ -0.46
VPS8-223ENST00000485024 PHF14O94880 888 aa12.16□□□□□ -0.46
VPS8-223ENST00000485024 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
VPS8-223ENST00000485024 PPP1R18Q6NYC8 613 aa12.14□□□□□ -0.47
VPS8-223ENST00000485024 C6orf132Q5T0Z8 1188 aa12.12□□□□□ -0.47
VPS8-223ENST00000485024 DDX27Q96GQ7 796 aaKnown RBP12.12□□□□□ -0.47
VPS8-223ENST00000485024 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
VPS8-223ENST00000485024 PDZRN3Q9UPQ7 1066 aa12.12□□□□□ -0.47
VPS8-223ENST00000485024 CHGAP10645 457 aaKnown RBP12.09□□□□□ -0.47
VPS8-223ENST00000485024 MFSD10Q14728 455 aa12.08□□□□□ -0.48
VPS8-223ENST00000485024 MTRQ99707 1265 aa12.08□□□□□ -0.48
VPS8-223ENST00000485024 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
VPS8-223ENST00000485024 PPP4CP60510 307 aa12.07□□□□□ -0.48
VPS8-223ENST00000485024 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.05□□□□□ -0.48
VPS8-223ENST00000485024 IL21Q9HBE4 155 aa12.04□□□□□ -0.48
VPS8-223ENST00000485024 ZNF516Q92618 1163 aa12.03□□□□□ -0.48
VPS8-223ENST00000485024 EPAS1Q99814 870 aa12.02□□□□□ -0.49
VPS8-223ENST00000485024 RYDENQ9NUL5 291 aaKnown RBP12.02□□□□□ -0.49
VPS8-223ENST00000485024 TSKSQ9UJT2 592 aa12.02□□□□□ -0.49
VPS8-223ENST00000485024 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
VPS8-223ENST00000485024 SAMD7Q7Z3H4 446 aa11.99□□□□□ -0.49
VPS8-223ENST00000485024 POTECB2RU33 542 aa11.98□□□□□ -0.49
VPS8-223ENST00000485024 NKX2-3Q8TAU0 364 aa11.98□□□□□ -0.49
VPS8-223ENST00000485024 TRIM67Q6ZTA4 783 aa11.96□□□□□ -0.49
VPS8-223ENST00000485024 SMAPO00193 183 aa11.95□□□□□ -0.5
VPS8-223ENST00000485024 PACS2Q86VP3 889 aa11.95□□□□□ -0.5
VPS8-223ENST00000485024 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
VPS8-223ENST00000485024 MYT1Q01538 1121 aa11.92□□□□□ -0.5
VPS8-223ENST00000485024 TSR1Q2NL82 804 aaKnown RBP11.91□□□□□ -0.5
VPS8-223ENST00000485024 LCE2AQ5TA79 106 aaPredicted RBP11.91□□□□□ -0.5
VPS8-223ENST00000485024 APLP1P51693 650 aa11.9□□□□□ -0.5
VPS8-223ENST00000485024 DDX12PQ92771 950 aa11.9□□□□□ -0.5
VPS8-223ENST00000485024 FAM198AQ9UFP1 575 aa11.9□□□□□ -0.5
VPS8-223ENST00000485024 DPYSL4O14531 572 aa11.88□□□□□ -0.51
VPS8-223ENST00000485024 GTPBP6O43824 516 aaPredicted RBP11.88□□□□□ -0.51
VPS8-223ENST00000485024 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
VPS8-223ENST00000485024 EMID1Q96A84 441 aaPredicted RBP11.86□□□□□ -0.51
VPS8-223ENST00000485024 PKDCCQ504Y2 493 aa11.85□□□□□ -0.51
VPS8-223ENST00000485024 TREML4Q6UXN2 200 aa11.85□□□□□ -0.51
VPS8-223ENST00000485024 CAMK2BQ13554 666 aa11.84□□□□□ -0.51
VPS8-223ENST00000485024 CADPS2Q86UW7 1296 aa11.84□□□□□ -0.51
VPS8-223ENST00000485024 CDCA7LQ96GN5 454 aa11.84□□□□□ -0.51
VPS8-223ENST00000485024 GGCXP38435 758 aa11.83□□□□□ -0.52
VPS8-223ENST00000485024 MAP3K7O43318 606 aa11.82□□□□□ -0.52
VPS8-223ENST00000485024 DGAT1O75907 488 aa11.82□□□□□ -0.52
VPS8-223ENST00000485024 COPS2P61201 443 aa11.82□□□□□ -0.52
VPS8-223ENST00000485024 RNF40O75150 1001 aa11.81□□□□□ -0.52
VPS8-223ENST00000485024 NBR1Q14596 966 aa11.81□□□□□ -0.52
VPS8-223ENST00000485024 TMUB1Q9BVT8 246 aa11.81□□□□□ -0.52
VPS8-223ENST00000485024 PRSS12P56730 875 aa11.8□□□□□ -0.52
VPS8-223ENST00000485024 TATDN2Q93075 761 aa11.8□□□□□ -0.52
VPS8-223ENST00000485024 SLC19A1P41440 591 aa11.78□□□□□ -0.52
VPS8-223ENST00000485024 PNMA3Q9UL41 463 aa11.78□□□□□ -0.52
VPS8-223ENST00000485024 PRR20EP86478 221 aa11.76□□□□□ -0.53
VPS8-223ENST00000485024 PRR20CP86479 221 aa11.76□□□□□ -0.53
VPS8-223ENST00000485024 PRR20DP86480 221 aa11.76□□□□□ -0.53
VPS8-223ENST00000485024 PRR20BP86481 221 aa11.76□□□□□ -0.53
VPS8-223ENST00000485024 PRR20AP86496 221 aa11.76□□□□□ -0.53
VPS8-223ENST00000485024 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
VPS8-223ENST00000485024 RNF223E7ERA6 249 aa11.75□□□□□ -0.53
VPS8-223ENST00000485024 SPRYD7Q5W111 196 aa11.75□□□□□ -0.53
VPS8-223ENST00000485024 ZPR1O75312 459 aa11.74□□□□□ -0.53
VPS8-223ENST00000485024 ST8SIA5O15466 376 aa11.73□□□□□ -0.53
VPS8-223ENST00000485024 PRIM1P49642 420 aaKnown RBP11.73□□□□□ -0.53
VPS8-223ENST00000485024 FAM187AA6NFU0 413 aa11.72□□□□□ -0.53
VPS8-223ENST00000485024 ZNF598Q86UK7 904 aaKnown RBP11.72□□□□□ -0.53
VPS8-223ENST00000485024 NUDT18Q6ZVK8 323 aa11.71□□□□□ -0.53
VPS8-223ENST00000485024 AAASQ9NRG9 546 aa11.7□□□□□ -0.54
VPS8-223ENST00000485024 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
VPS8-223ENST00000485024 GDF9O60383 454 aa11.67□□□□□ -0.54
VPS8-223ENST00000485024 SWT1Q5T5J6 900 aaKnown RBP11.67□□□□□ -0.54
VPS8-223ENST00000485024 LIAT1Q6ZQX7 453 aa11.67□□□□□ -0.54
VPS8-223ENST00000485024 HDGFP51858 240 aaKnown RBP11.66□□□□□ -0.54
VPS8-223ENST00000485024 PDIA6Q15084 440 aa11.66□□□□□ -0.54
VPS8-223ENST00000485024 ZNF697Q5TEC3 545 aa11.66□□□□□ -0.54
VPS8-223ENST00000485024 CERKQ8TCT0 537 aa11.66□□□□□ -0.54
VPS8-223ENST00000485024 PPEF1O14829 653 aaPredicted RBP11.64□□□□□ -0.55
VPS8-223ENST00000485024 TLL1O43897 1013 aa11.64□□□□□ -0.55
VPS8-223ENST00000485024 STK17AQ9UEE5 414 aa11.64□□□□□ -0.55
VPS8-223ENST00000485024 WFS1O76024 890 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms